| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067563
Identifier: 78067563
GI number: 78067563
Start: 3237181
End: 3239652
Strand: Direct
Name: 78067563
Synonym: Bcep18194_A6094
Alternate gene names: NA
Gene position: 3237181-3239652 (Clockwise)
Preceding gene: 78067562
Following gene: 78067564
Centisome position: 87.63
GC content: 72.82
Gene sequence:
>2472_bases ATGGACGAACGCACACGATCCTCACCCGTCGCCCACCGCCTGCACGCGCTGCGGCAGCGCGCGGTGCTCGTGTGGCTGCT TGTGCTCGTCGCGTGCGGCGTCGCGATCGGGCGTGCGCACTTCACGGCCGACCTGTCCGCGTTCCTGCCGAGTGCGCCGA GCGCCGGGCAGCGCGTGCTCGTCGACCAGTTGCGCGACGGCATCGTGTCGCGGCTGATCCTCGTCGCGATCGACGGCGGC GATGCCACCACGCGCGCCGCGCTGTCGCGACGCGTCGCCGGCACGCTGCACACTGATCCGCAGTTCGCGGCCGTTCACAA CGGCGAAGCCGCGAACGACGCGCGCGATCGCCAGTTCATCTTCGATCACCGCTACCTGCTGAGCCCGGCCGTCACGCCGC AGCGCTTCAGCGCCGCCGGCCTGCATCAGGCGCTCGGCGACAGCCTCGACCTGCTGAGCTCGTCGGCCGGCCTCGTGGCC AAGGCGATGCTGCCGCGCGACCCGACCGGTGAAGTCGCCACGCTCGTCGACCAGTTCGACAGCGCGGCGGAACCGGCGAG CCGCGACGGCGTGTGGGCGTCGCGCGACGGCACGCGCGCGGTGCTCGTCGTGCAGACGGCCGCCGCCGGTTCCGATACCG ACGCCCAGGCCCGCGCGATCGACACCGTGCGCCGCGCGTTCGCCACTGCGAAGCAGGCCATGCCGAATGCCGCCGCGACC ACGCTCGCGATGACGGGGCCCGGTGTGTTCTCGGTCGACACGCGCGACACGATCCGGCACGACGTCGAACGGCTGTCGAC GGCGAGCGTCGTGCTGATCGTCGCACTGCTGCTGACGCTGTACCGCTCGCCGCGCACGCTCGCGCTCGGGTTGCTGCCGG TGCTGACGGGTGTCGCGGCGGGCATCGCGGCGGTCAGCCTCGCGTTCGGCACGGTTCACGGGCTGACGCTCGGCTTCGGT ACGACGCTGATCGGCGAAGCCGTCGACTATTCGATCTACCTGTTCGTGCAGTCGGCGCAGGCCGGCACGCGCGGCGCAGC GCGCCCGGCCGACGCGACGCGCGCATGGGTCGCCGCGTACTGGCCGACGATCCGGCTCGGCGTGCTGACGTCCGTGTGCG GTTTCGCGTCGATGCTGTTCTCCGGATTTCCGGGCCTCGTGCAGCTCGGGCTGTACTCGATCGTCGGGCTGACGGCCGCC GCGCTCGTCACGCGCTTCGTGCTGCCGCACCTGCGCGGCGAGCATGTCGCGATCCGCGACGTGTCACGCGTCGGCGCCGT GCTCGCGCGCGCAGCCGACGCCGCGCCGCGGCTGCGCTGGCCGCTCGCCGTGCTCGTGATCGCCGCGGGCGCGACGCTCG TGCTGCATCGCGACGGCCTGTGGAGCCGCGAACTCGCCGCGCTCAGCCCCGTGCCGGCGCAAGCGCAGGCGCTCGACGCA CGGCTGCGCGCGGACGTCGGCGCACCCGACGTGCGCTACCTCGTCGTGATTGCCGCATCGACCGAACAGGCCGCGCTCGA AGGTGCCGAAAAAGTGGCCGCGCAATTGCAACCGCTCGTCGACCAGGGCGCGCTCGCCGGCTTCGAAAGCCCCGCGCGCT ACCTGCCGAGCGACGCCGCGCAGCGCGCGCGCCGGGCGAGCCTGCCGGATACCGGCGCGCTCGCCGCGCGGATGCACGAC GCCGTCGCGAACCAGCCGATCGCGGTCAAGCCCGACCTGTTCGCGCCGTTCATCACCGACGTCGGGGCTGCGCGCCACGC GCCGCTGCTCACGCGCGCGGACTTGCGCGGCACGTCGATGGCGCTCGCCGTCGATGCGCTGCTGACCGAACGCGACGGCC GCTGGAGCGCGATGCTGCCGCTGCGCGCGCCGGACGCCGCTCGCACCGCGCAACCGGCATCGAGTCTCGACGCGACGCCG ATTCGCGCGGCCGTCGCGCGCGCGGGCGTGCCCGATGCGCTGTTCGTCGACATGAAGGCCGAAGCCGATCGCCTGTACGT GAGCTACGTGCACGAGGACATCCGGCTGTCGCTCGCGGGCTTCGCCGCGATCGCCGTGCTGCTGCTGATCGCGCTGCGCT CGCCGCGTCGCGTCGTGCGCGCGCTCGCGCCGCTCGTCGCGGCCGTGCTGGTCGTGACGGCCGGCTTCGCGCTCGCCGGC GTGCAACTGACGATCCTGCATCTCGTCGGGATGCTGCTGATCGTCGCGGTCGGCTCGAACTACGCGCTGTTCTTCTGCAA GCGCGACGACGCGCAGCCCGTCACGCCGTACACGCTCGTGTCGCTGCTGATCGCGAACCTCGCGACGGTCGCGGGCTTCG GGTTGCTGGCGCTGTCACACGTGCCGCTACTCGAAACCTTCGGGCTGACCGTCGGCCCGGGCGCGATGCTCGCGCTCGCG TTCGCGGCGATTCTTGCGCCGCGCGAGGCTGCGTCCGCAACCGGCAACCGTCATCAAGGAGGCCGCGCATGA
Upstream 100 bases:
>100_bases TCGACGGCACGCGCGACGTGTTGCGCAGCGTCGCGATCCGGCAGGCCGACGGCGACCGTTCGGTGATGCGCCTGCAACCC GTTCCGGCGAACGCCAACTG
Downstream 100 bases:
>100_bases GCGCGCCGTCGTCCGTTCCGTCGCGACAGCCCGGCGATGCGCGCCGCTGGAAGCCGACGCCGCTGATCGCGGGCACGGCC GCGCTGCATGCGGGCGCGGC
Product: MMPL family membrane protein
Products: NA
Alternate protein names: Drug Efflux Pump RND Superfamily; Lipoprotein Transmembrane; Transmembrane Protein; Mmpl Exporter Transmembrane Protein; XanthomoNADin Exporter; MMPL Domain Protein; RND Superfamily Drug Exporter; Exporter TRANSMEMBRANE PROTEIN; Phosphoglucomutase/Phosphomannomutase Alpha/Beta/Subunit
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MDERTRSSPVAHRLHALRQRAVLVWLLVLVACGVAIGRAHFTADLSAFLPSAPSAGQRVLVDQLRDGIVSRLILVAIDGG DATTRAALSRRVAGTLHTDPQFAAVHNGEAANDARDRQFIFDHRYLLSPAVTPQRFSAAGLHQALGDSLDLLSSSAGLVA KAMLPRDPTGEVATLVDQFDSAAEPASRDGVWASRDGTRAVLVVQTAAAGSDTDAQARAIDTVRRAFATAKQAMPNAAAT TLAMTGPGVFSVDTRDTIRHDVERLSTASVVLIVALLLTLYRSPRTLALGLLPVLTGVAAGIAAVSLAFGTVHGLTLGFG TTLIGEAVDYSIYLFVQSAQAGTRGAARPADATRAWVAAYWPTIRLGVLTSVCGFASMLFSGFPGLVQLGLYSIVGLTAA ALVTRFVLPHLRGEHVAIRDVSRVGAVLARAADAAPRLRWPLAVLVIAAGATLVLHRDGLWSRELAALSPVPAQAQALDA RLRADVGAPDVRYLVVIAASTEQAALEGAEKVAAQLQPLVDQGALAGFESPARYLPSDAAQRARRASLPDTGALAARMHD AVANQPIAVKPDLFAPFITDVGAARHAPLLTRADLRGTSMALAVDALLTERDGRWSAMLPLRAPDAARTAQPASSLDATP IRAAVARAGVPDALFVDMKAEADRLYVSYVHEDIRLSLAGFAAIAVLLLIALRSPRRVVRALAPLVAAVLVVTAGFALAG VQLTILHLVGMLLIVAVGSNYALFFCKRDDAQPVTPYTLVSLLIANLATVAGFGLLALSHVPLLETFGLTVGPGAMLALA FAAILAPREAASATGNRHQGGRA
Sequences:
>Translated_823_residues MDERTRSSPVAHRLHALRQRAVLVWLLVLVACGVAIGRAHFTADLSAFLPSAPSAGQRVLVDQLRDGIVSRLILVAIDGG DATTRAALSRRVAGTLHTDPQFAAVHNGEAANDARDRQFIFDHRYLLSPAVTPQRFSAAGLHQALGDSLDLLSSSAGLVA KAMLPRDPTGEVATLVDQFDSAAEPASRDGVWASRDGTRAVLVVQTAAAGSDTDAQARAIDTVRRAFATAKQAMPNAAAT TLAMTGPGVFSVDTRDTIRHDVERLSTASVVLIVALLLTLYRSPRTLALGLLPVLTGVAAGIAAVSLAFGTVHGLTLGFG TTLIGEAVDYSIYLFVQSAQAGTRGAARPADATRAWVAAYWPTIRLGVLTSVCGFASMLFSGFPGLVQLGLYSIVGLTAA ALVTRFVLPHLRGEHVAIRDVSRVGAVLARAADAAPRLRWPLAVLVIAAGATLVLHRDGLWSRELAALSPVPAQAQALDA RLRADVGAPDVRYLVVIAASTEQAALEGAEKVAAQLQPLVDQGALAGFESPARYLPSDAAQRARRASLPDTGALAARMHD AVANQPIAVKPDLFAPFITDVGAARHAPLLTRADLRGTSMALAVDALLTERDGRWSAMLPLRAPDAARTAQPASSLDATP IRAAVARAGVPDALFVDMKAEADRLYVSYVHEDIRLSLAGFAAIAVLLLIALRSPRRVVRALAPLVAAVLVVTAGFALAG VQLTILHLVGMLLIVAVGSNYALFFCKRDDAQPVTPYTLVSLLIANLATVAGFGLLALSHVPLLETFGLTVGPGAMLALA FAAILAPREAASATGNRHQGGRA >Mature_823_residues MDERTRSSPVAHRLHALRQRAVLVWLLVLVACGVAIGRAHFTADLSAFLPSAPSAGQRVLVDQLRDGIVSRLILVAIDGG DATTRAALSRRVAGTLHTDPQFAAVHNGEAANDARDRQFIFDHRYLLSPAVTPQRFSAAGLHQALGDSLDLLSSSAGLVA KAMLPRDPTGEVATLVDQFDSAAEPASRDGVWASRDGTRAVLVVQTAAAGSDTDAQARAIDTVRRAFATAKQAMPNAAAT TLAMTGPGVFSVDTRDTIRHDVERLSTASVVLIVALLLTLYRSPRTLALGLLPVLTGVAAGIAAVSLAFGTVHGLTLGFG TTLIGEAVDYSIYLFVQSAQAGTRGAARPADATRAWVAAYWPTIRLGVLTSVCGFASMLFSGFPGLVQLGLYSIVGLTAA ALVTRFVLPHLRGEHVAIRDVSRVGAVLARAADAAPRLRWPLAVLVIAAGATLVLHRDGLWSRELAALSPVPAQAQALDA RLRADVGAPDVRYLVVIAASTEQAALEGAEKVAAQLQPLVDQGALAGFESPARYLPSDAAQRARRASLPDTGALAARMHD AVANQPIAVKPDLFAPFITDVGAARHAPLLTRADLRGTSMALAVDALLTERDGRWSAMLPLRAPDAARTAQPASSLDATP IRAAVARAGVPDALFVDMKAEADRLYVSYVHEDIRLSLAGFAAIAVLLLIALRSPRRVVRALAPLVAAVLVVTAGFALAG VQLTILHLVGMLLIVAVGSNYALFFCKRDDAQPVTPYTLVSLLIANLATVAGFGLLALSHVPLLETFGLTVGPGAMLALA FAAILAPREAASATGNRHQGGRA
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85969; Mature: 85969
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDERTRSSPVAHRLHALRQRAVLVWLLVLVACGVAIGRAHFTADLSAFLPSAPSAGQRVL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VDQLRDGIVSRLILVAIDGGDATTRAALSRRVAGTLHTDPQFAAVHNGEAANDARDRQFI HHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHH FDHRYLLSPAVTPQRFSAAGLHQALGDSLDLLSSSAGLVAKAMLPRDPTGEVATLVDQFD HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHH SAAEPASRDGVWASRDGTRAVLVVQTAAAGSDTDAQARAIDTVRRAFATAKQAMPNAAAT HHCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH TLAMTGPGVFSVDTRDTIRHDVERLSTASVVLIVALLLTLYRSPRTLALGLLPVLTGVAA EEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GIAAVSLAFGTVHGLTLGFGTTLIGEAVDYSIYLFVQSAQAGTRGAARPADATRAWVAAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHH WPTIRLGVLTSVCGFASMLFSGFPGLVQLGLYSIVGLTAAALVTRFVLPHLRGEHVAIRD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH VSRVGAVLARAADAAPRLRWPLAVLVIAAGATLVLHRDGLWSRELAALSPVPAQAQALDA HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHH RLRADVGAPDVRYLVVIAASTEQAALEGAEKVAAQLQPLVDQGALAGFESPARYLPSDAA HHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH QRARRASLPDTGALAARMHDAVANQPIAVKPDLFAPFITDVGAARHAPLLTRADLRGTSM HHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCHH ALAVDALLTERDGRWSAMLPLRAPDAARTAQPASSLDATPIRAAVARAGVPDALFVDMKA HHHHHHHHHCCCCCEEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCC EADRLYVSYVHEDIRLSLAGFAAIAVLLLIALRSPRRVVRALAPLVAAVLVVTAGFALAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VQLTILHLVGMLLIVAVGSNYALFFCKRDDAQPVTPYTLVSLLIANLATVAGFGLLALSH HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC VPLLETFGLTVGPGAMLALAFAAILAPREAASATGNRHQGGRA CCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MDERTRSSPVAHRLHALRQRAVLVWLLVLVACGVAIGRAHFTADLSAFLPSAPSAGQRVL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VDQLRDGIVSRLILVAIDGGDATTRAALSRRVAGTLHTDPQFAAVHNGEAANDARDRQFI HHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHH FDHRYLLSPAVTPQRFSAAGLHQALGDSLDLLSSSAGLVAKAMLPRDPTGEVATLVDQFD HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHH SAAEPASRDGVWASRDGTRAVLVVQTAAAGSDTDAQARAIDTVRRAFATAKQAMPNAAAT HHCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH TLAMTGPGVFSVDTRDTIRHDVERLSTASVVLIVALLLTLYRSPRTLALGLLPVLTGVAA EEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GIAAVSLAFGTVHGLTLGFGTTLIGEAVDYSIYLFVQSAQAGTRGAARPADATRAWVAAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHH WPTIRLGVLTSVCGFASMLFSGFPGLVQLGLYSIVGLTAAALVTRFVLPHLRGEHVAIRD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH VSRVGAVLARAADAAPRLRWPLAVLVIAAGATLVLHRDGLWSRELAALSPVPAQAQALDA HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHH RLRADVGAPDVRYLVVIAASTEQAALEGAEKVAAQLQPLVDQGALAGFESPARYLPSDAA HHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH QRARRASLPDTGALAARMHDAVANQPIAVKPDLFAPFITDVGAARHAPLLTRADLRGTSM HHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCHH ALAVDALLTERDGRWSAMLPLRAPDAARTAQPASSLDATPIRAAVARAGVPDALFVDMKA HHHHHHHHHCCCCCEEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCC EADRLYVSYVHEDIRLSLAGFAAIAVLLLIALRSPRRVVRALAPLVAAVLVVTAGFALAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VQLTILHLVGMLLIVAVGSNYALFFCKRDDAQPVTPYTLVSLLIANLATVAGFGLLALSH HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC VPLLETFGLTVGPGAMLALAFAAILAPREAASATGNRHQGGRA CCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA