| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78067562
Identifier: 78067562
GI number: 78067562
Start: 3236519
End: 3237181
Strand: Direct
Name: 78067562
Synonym: Bcep18194_A6093
Alternate gene names: NA
Gene position: 3236519-3237181 (Clockwise)
Preceding gene: 78067561
Following gene: 78067563
Centisome position: 87.61
GC content: 69.08
Gene sequence:
>663_bases ATGACCGCCGTTCGCCGCCGCCTGCCCACGCTCCCGTCCGCGCTGCGTCGTGCCGTCCGCATGCTGGCCGTCGCCGTCGC CGTCGCGGCAACCCCCGCCGCGATCGCGCTGGCTGCCGCGCCCGTGCAGGCGGCCGATACGGTGCCCGCGTGGACGCTCG ACCGGCTGATGTCGACGCTCGCACAGCACAAGTCGGGACGCGCGACGTTCACCGAGACGAAGTACCTATCGATCGCGACG CAGCCGGTCGAATCGTCAGGCGAACTTGTATTCGTCGCGCCCGATCATCTCGAGAAGCACACGCTGAGCCCGAAGCCCGA ACACCTCGTCGTCGACGGCGACATGCTCACCGTCGAGCGCAACAACCGCAAGTACACGCTCGCGCTCGCACGCTATCCGG AACTCGGCGCGTTCATCGACAGCATCCGCGCGACGCTCGCCGGCAACCGCTTCGCGCTCGAACAGGTGTACAAGGTCGCG CTCGCCGGGCGCGGCGACGACTGGACGCTGACGCTCACGCCGCTCGACTCGCGGATGCTGAAGGTTGTCAGCACGATCAC GCTCGACGGCACGCGCGACGTGTTGCGCAGCGTCGCGATCCGGCAGGCCGACGGCGACCGTTCGGTGATGCGCCTGCAAC CCGTTCCGGCGAACGCCAACTGA
Upstream 100 bases:
>100_bases ATTTCGATTTCTGGCAAGGCGGCGATGCCGCGACCGTGACCGCGCGCAGCGACGCGGCGCGCGCCGGTGCCGGCCTGTCC GCCACGAGGGATTCCGACGC
Downstream 100 bases:
>100_bases TGGACGAACGCACACGATCCTCACCCGTCGCCCACCGCCTGCACGCGCTGCGGCAGCGCGCGGTGCTCGTGTGGCTGCTT GTGCTCGTCGCGTGCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Fatty Acyl CoA Synthetase; Lipoprotein
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTAVRRRLPTLPSALRRAVRMLAVAVAVAATPAAIALAAAPVQAADTVPAWTLDRLMSTLAQHKSGRATFTETKYLSIAT QPVESSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRKYTLALARYPELGAFIDSIRATLAGNRFALEQVYKVA LAGRGDDWTLTLTPLDSRMLKVVSTITLDGTRDVLRSVAIRQADGDRSVMRLQPVPANAN
Sequences:
>Translated_220_residues MTAVRRRLPTLPSALRRAVRMLAVAVAVAATPAAIALAAAPVQAADTVPAWTLDRLMSTLAQHKSGRATFTETKYLSIAT QPVESSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRKYTLALARYPELGAFIDSIRATLAGNRFALEQVYKVA LAGRGDDWTLTLTPLDSRMLKVVSTITLDGTRDVLRSVAIRQADGDRSVMRLQPVPANAN >Mature_219_residues TAVRRRLPTLPSALRRAVRMLAVAVAVAATPAAIALAAAPVQAADTVPAWTLDRLMSTLAQHKSGRATFTETKYLSIATQ PVESSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRKYTLALARYPELGAFIDSIRATLAGNRFALEQVYKVAL AGRGDDWTLTLTPLDSRMLKVVSTITLDGTRDVLRSVAIRQADGDRSVMRLQPVPANAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23862; Mature: 23731
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVRRRLPTLPSALRRAVRMLAVAVAVAATPAAIALAAAPVQAADTVPAWTLDRLMSTL CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH AQHKSGRATFTETKYLSIATQPVESSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVER HHHCCCCCEEEECEEEEEEECCCCCCCCEEEEECCCHHHCCCCCCCCEEEEECCEEEEEE NNRKYTLALARYPELGAFIDSIRATLAGNRFALEQVYKVALAGRGDDWTLTLTPLDSRML CCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH KVVSTITLDGTRDVLRSVAIRQADGDRSVMRLQPVPANAN HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure TAVRRRLPTLPSALRRAVRMLAVAVAVAATPAAIALAAAPVQAADTVPAWTLDRLMSTL CCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH AQHKSGRATFTETKYLSIATQPVESSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVER HHHCCCCCEEEECEEEEEEECCCCCCCCEEEEECCCHHHCCCCCCCCEEEEECCEEEEEE NNRKYTLALARYPELGAFIDSIRATLAGNRFALEQVYKVALAGRGDDWTLTLTPLDSRML CCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH KVVSTITLDGTRDVLRSVAIRQADGDRSVMRLQPVPANAN HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA