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The map label for this gene is ykgF [H]

Identifier: 78067552

GI number: 78067552

Start: 3224853

End: 3226298

Strand: Direct

Name: ykgF [H]

Synonym: Bcep18194_A6083

Alternate gene names: 78067552

Gene position: 3224853-3226298 (Clockwise)

Preceding gene: 78067551

Following gene: 78067553

Centisome position: 87.3

GC content: 69.16

Gene sequence:

>1446_bases
ATGAGCGACCACACTGTGCAATTCGTCGCCCCCGGCGACTTCAAGGCCCGCGCGCGCGCCGCGCTCGACGATCCCGCGCT
GCGCCAGAGCTTTCGTGGCGCGATGGACTTCCTGCAAGGCAAGCGTTCATCGCAATTCCCCGACGACACCGAATTGCAGC
AACTGCGCGACCTCGGCGAAGCGGTGCGGCAGCATGCGCTCGCGCAGTTGCCCGCGCTGCTCGAACGGCTCGAGACGAAG
CTCACCGAAGCCGGCGTGCACGTGCACTGGGCCGAGACGGCGGCCGACGCAAACGCGATCGTGCTCGGCATCGCGCAGGC
GAAGAAGGCGCGCCGCGTGATCAAGGGCAAGTCGATGGCGAGCGAGGAAATCGAGCTGAACCATTACCTCGCGGAGCACG
GCGTCGACTGCATCGAATCCGACATGGGCGAATTCATCGTGCAGCTCGCGGGCGAGAAGCCGTCGCACATCGTGATGCCG
GCGATCCACAAGACGCGCGGCGACATCGCCGAGCTGTTCGAGGAACACATCCCCGGCACGCGCTACACGGAGGACGTCGA
CGAGCTGATCCAGACCGGCCGGCGCGCGCTGCGCCGCGCGTTCGCCGAGGCGGACATCGGCCTGTCGGGCGTGAACTTCG
CGGCCGCCGACACGGGCACGCTGTGGCTGGTCGAAAACGAGGGCAACGGTCGCCTGTCGACGACGGTGCCCGACACGCAC
GTGGCGATCATGGGGATCGAGAAGGTCGTCGAGAAGCTCGAGCACATCGTGCCGCTGTCGAGCCTGCTCACACGCTCGGC
CACCGGCCAGGCGATCACGACCTACTTCAACCTGATCTCGGGCCCGCGCCGCGACGGCGAACGCGACGGCCCGCGCGAGC
TGCACCTCGTGCTGCTCGACAACGGCCGTACGCAGGCCTACGCGGACGAACAGCTGCGCGCGACGCTGCAGTGCATCCGC
TGCGGCGCGTGCATGAACCACTGCCCCGTCTATACGCGCATCGGCGGCCACGCATACGGCACGACCTACCCGGGCCCGAT
CGGCAAGATCATCTCGCCGCACCTGCTCGGCCTCGACGCGACGGCCGACCTGCCGACCGCATCGACGCTGTGCGGCGCAT
GCGGCGAGGTGTGCCCGGTGCGAATTCCGATCCCGCAACTGCTCGTGCGGCTGCGCACCGAAGCGAACCGCAAGCCCGAC
GAACCCGTCGCGCATCCGCTGCGCGGCCAGGGCGCGAACTACAACCGCGCGGAAGACCTCGTGTGGCGCTTCTGGTCGGG
CGCGTTCGCACATCCACGCGCGTACCGCGCGTTCCGCTGGACCGCAACCCGGCTGCGTGCGCTGACGCCCGCGAAACAGA
TGGGCTGGACGCAGCACCGCACGCCGCTCGAACCGGCGCCGCGCAGCCTGTCCGACCTGCTGCGCGCACGCGGCCAGCCC
GAATAG

Upstream 100 bases:

>100_bases
TCGCGTATGGCGCACACGGCCCACGCCGTCTGTGGGTCGTGATCGTCACCGATACGGCAGCCGCCCGCCCGGCCGCCACC
GCCAGCGAGGACTTCCCGCG

Downstream 100 bases:

>100_bases
CCGTTTCGTTTTTCAAGCCGTACCGACAAAAACCTATGGAGGAGACATCCATGCAGGCCTGGCATCAGATCTACACCCCG
CTCGGCAGCCTCGGGCTGTC

Product: Iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSDHTVQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRSSQFPDDTELQQLRDLGEAVRQHALAQLPALLERLETK
LTEAGVHVHWAETAADANAIVLGIAQAKKARRVIKGKSMASEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMP
AIHKTRGDIAELFEEHIPGTRYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRRDGERDGPRELHLVLLDNGRTQAYADEQLRATLQCIR
CGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDATADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPD
EPVAHPLRGQGANYNRAEDLVWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
E

Sequences:

>Translated_481_residues
MSDHTVQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRSSQFPDDTELQQLRDLGEAVRQHALAQLPALLERLETK
LTEAGVHVHWAETAADANAIVLGIAQAKKARRVIKGKSMASEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMP
AIHKTRGDIAELFEEHIPGTRYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRRDGERDGPRELHLVLLDNGRTQAYADEQLRATLQCIR
CGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDATADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPD
EPVAHPLRGQGANYNRAEDLVWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
E
>Mature_480_residues
SDHTVQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRSSQFPDDTELQQLRDLGEAVRQHALAQLPALLERLETKL
TEAGVHVHWAETAADANAIVLGIAQAKKARRVIKGKSMASEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMPA
IHKTRGDIAELFEEHIPGTRYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTHV
AIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRRDGERDGPRELHLVLLDNGRTQAYADEQLRATLQCIRC
GACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDATADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPDE
PVAHPLRGQGANYNRAEDLVWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQPE

Specific function: Unknown

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=471, Percent_Identity=39.7027600849257, Blast_Score=352, Evalue=3e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52967; Mature: 52836

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHTVQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRSSQFPDDTELQQLRDLGE
CCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AVRQHALAQLPALLERLETKLTEAGVHVHWAETAADANAIVLGIAQAKKARRVIKGKSMA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCEEEEEHHHHHHHHHHHHCCCCC
SEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMPAIHKTRGDIAELFEEHIPGT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHHHHHHHHCCCC
RYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCEEEECCCCCH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRRDGERDGPRELHLVLLD
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
NGRTQAYADEQLRATLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCCHHCCCCC
TADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPDEPVAHPLRGQGANYNRAEDL
CCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
VWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
E
C
>Mature Secondary Structure 
SDHTVQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRSSQFPDDTELQQLRDLGE
CCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AVRQHALAQLPALLERLETKLTEAGVHVHWAETAADANAIVLGIAQAKKARRVIKGKSMA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCEEEEEHHHHHHHHHHHHCCCCC
SEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMPAIHKTRGDIAELFEEHIPGT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHHHHHHHHCCCC
RYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCEEEECCCCCH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRRDGERDGPRELHLVLLD
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
NGRTQAYADEQLRATLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCCHHCCCCC
TADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPDEPVAHPLRGQGANYNRAEDL
CCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
VWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]