| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ykgG [C]
Identifier: 78067551
GI number: 78067551
Start: 3224122
End: 3224856
Strand: Direct
Name: ykgG [C]
Synonym: Bcep18194_A6082
Alternate gene names: 78067551
Gene position: 3224122-3224856 (Clockwise)
Preceding gene: 78067550
Following gene: 78067552
Centisome position: 87.28
GC content: 73.88
Gene sequence:
>735_bases ATGAGCGCGCGCGACGCAATCCTCCAGCGGCTGCGCGCCGCCGCCCCGGGTGTCGCGGCAGCGGCCGCCCCCACGCTCGA CGCACGCATCGACACGCATTACGACACGCGCCGCGCGCAGAACGAGGCCGCGCACGATCCGCACACGCTTGCCCACACGA TGCAGGCCGCGCTCACCGCGTCGCACGCGGAGGTCTGGTGCGCGACCGGCGACGAATGGCCCGCGCAACTCGCTGCACGG CTCGCCGACGCCGGCGTGCGCCGCCTGCTGCTCGACCCGGCTCGCGCCGAATCCGCGGCGCTCGCCCGCGCGCTGCCCGA CACGGTCGCGCCCGTGCCGTTCGACCGGCCGATCGACGCGTGGAAGACCGAACTGTTCGACACGATCGACGCGGGCTTCA CCGTCGCGCGCTCGGGAATCGCGGCCACCGGCACCGTCGTGCTCGCACCCGATGCCGGCACGCCGCGCACGGTGTCGCTG GTGCCGCCGCTGCATGTCGCGCTCGTTCATGCGAGCACGCTGCATCCGGACCTGCACGCGGCCGTGCACGCGGAGCGCTG GCACGCCGGCATGCCGACCAACCTCGTGCTGGTGTCGGGCCCGTCGAAGACCTCCGACATCCAGCAGACGCTCGCGTATG GCGCACACGGCCCACGCCGTCTGTGGGTCGTGATCGTCACCGATACGGCAGCCGCCCGCCCGGCCGCCACCGCCAGCGAG GACTTCCCGCGATGA
Upstream 100 bases:
>100_bases ACGCGGCCGACAAGGCCGGCGCGCCGCTGCCGGTCGAGCACCTCGCCAGTTTCCTGTGGCGCCGCACGGCCGGCGCCGCA TCGCTGCGCGGAGACAAGCA
Downstream 100 bases:
>100_bases GCGACCACACTGTGCAATTCGTCGCCCCCGGCGACTTCAAGGCCCGCGCGCGCGCCGCGCTCGACGATCCCGCGCTGCGC CAGAGCTTTCGTGGCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSARDAILQRLRAAAPGVAAAAAPTLDARIDTHYDTRRAQNEAAHDPHTLAHTMQAALTASHAEVWCATGDEWPAQLAAR LADAGVRRLLLDPARAESAALARALPDTVAPVPFDRPIDAWKTELFDTIDAGFTVARSGIAATGTVVLAPDAGTPRTVSL VPPLHVALVHASTLHPDLHAAVHAERWHAGMPTNLVLVSGPSKTSDIQQTLAYGAHGPRRLWVVIVTDTAAARPAATASE DFPR
Sequences:
>Translated_244_residues MSARDAILQRLRAAAPGVAAAAAPTLDARIDTHYDTRRAQNEAAHDPHTLAHTMQAALTASHAEVWCATGDEWPAQLAAR LADAGVRRLLLDPARAESAALARALPDTVAPVPFDRPIDAWKTELFDTIDAGFTVARSGIAATGTVVLAPDAGTPRTVSL VPPLHVALVHASTLHPDLHAAVHAERWHAGMPTNLVLVSGPSKTSDIQQTLAYGAHGPRRLWVVIVTDTAAARPAATASE DFPR >Mature_243_residues SARDAILQRLRAAAPGVAAAAAPTLDARIDTHYDTRRAQNEAAHDPHTLAHTMQAALTASHAEVWCATGDEWPAQLAARL ADAGVRRLLLDPARAESAALARALPDTVAPVPFDRPIDAWKTELFDTIDAGFTVARSGIAATGTVVLAPDAGTPRTVSLV PPLHVALVHASTLHPDLHAAVHAERWHAGMPTNLVLVSGPSKTSDIQQTLAYGAHGPRRLWVVIVTDTAAARPAATASED FPR
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutC/ykgG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003741 - InterPro: IPR002698 [H]
Pfam domain/function: PF02589 DUF162 [H]
EC number: NA
Molecular weight: Translated: 25717; Mature: 25586
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARDAILQRLRAAAPGVAAAAAPTLDARIDTHYDTRRAQNEAAHDPHTLAHTMQAALTA CCHHHHHHHHHHHCCCCCHHHCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH SHAEVWCATGDEWPAQLAARLADAGVRRLLLDPARAESAALARALPDTVAPVPFDRPIDA CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCHHH WKTELFDTIDAGFTVARSGIAATGTVVLAPDAGTPRTVSLVPPLHVALVHASTLHPDLHA HHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCEEEEHHHHHCCCHHHH AVHAERWHAGMPTNLVLVSGPSKTSDIQQTLAYGAHGPRRLWVVIVTDTAAARPAATASE HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCC DFPR CCCC >Mature Secondary Structure SARDAILQRLRAAAPGVAAAAAPTLDARIDTHYDTRRAQNEAAHDPHTLAHTMQAALTA CHHHHHHHHHHHCCCCCHHHCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH SHAEVWCATGDEWPAQLAARLADAGVRRLLLDPARAESAALARALPDTVAPVPFDRPIDA CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCHHH WKTELFDTIDAGFTVARSGIAATGTVVLAPDAGTPRTVSLVPPLHVALVHASTLHPDLHA HHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCEEEEHHHHHCCCHHHH AVHAERWHAGMPTNLVLVSGPSKTSDIQQTLAYGAHGPRRLWVVIVTDTAAARPAATASE HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCC DFPR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]