| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is ybeZ [H]
Identifier: 78067491
GI number: 78067491
Start: 3156721
End: 3157767
Strand: Direct
Name: ybeZ [H]
Synonym: Bcep18194_A6022
Alternate gene names: 78067491
Gene position: 3156721-3157767 (Clockwise)
Preceding gene: 78067490
Following gene: 78067492
Centisome position: 85.45
GC content: 69.34
Gene sequence:
>1047_bases TTGAAGCCGACCCAAGCACTGGAATTCGTCGCGCCGCGCGACGACAACGCGCGCCTCGCCAACCTCTGCGGCCCGCTCGA CGAGAACCTGCGGCAGATCGAACAGGCGCTCGACGTCACGCTATCGCGACGCGGCCACCGGATCGCGATTCGCGGCCGCG GCGCCAAGCTCGCGCTCGCCGCGCTCGAGAACTTCTACAACCGCGCGCGCGATGCGTTGTCGGTCGACGACATCCAGCTC GCGCTGGTCGAAGTACGCCACACGGCCGGCAACGGCCGCCAGGACACGCTCGACGTGCGCTTTCGCGGCGACCCCGACCA TCCGTTCGACGACCCCATCGTACAACTCGACGCCAGCGAGCCGGACGAGGAGCCCGCACCGAAGCTCTACACGCGGCGCG CCGACCTGCGCGGCCGCACGCCGGCACAGCGCGAATACCTGAAGCAGATCCTTTCGCACGACGTGACGCTCGGCGTCGGG CCGGCCGGCACCGGCAAGACCTACCTCGCGGTCGCGTGCGCGGTCGACGCGCTCGAACGCGACCAGGTCAAGCGGATCGT GCTGACGCGCCCGGCCGTCGAGGCCGGCGAGCGGCTCGGCTTCCTGCCGGGCGATCTCGCGCAGAAGGTCGACCCGTACC TGCGCCCGCTGTACGACGCGCTGTACGACCTGCTCGGCTTCGACAAGACGGCGAAGATGTTCGAGCGCCAGATGATCGAG ATCGCGCCGCTCGCGTACATGCGCGGCCGCACGCTGAACCACGCGTTCATCATCCTCGACGAGGCGCAGAACACGACGCC CGAACAGATGAAGATGTTCCTCACGCGGATCGGCTTCGGCTCAAAGGCGGTCGTGACCGGCGACACGAGCCAGGTCGACC TGCCGCGCGGCCACAAGAGCGGCCTCGTCGAGGCGCAGCAAGTGCTCGGCGGCGTGCGCGGCATCGCGCTCACGCGCTTC ACGAGCGCGGACGTCGTGCGCCATCCGCTCGTCGCGCGCATCGTCGAGGCATACGACGAATTCCACGCGCAGCACCAGGA CGGCTGA
Upstream 100 bases:
>100_bases ATGCGTACCCGCATTCGCTGCGCGGCGAGCTCGTGCTCGTCAGCGACGACGCGAGCGCGGCCACCCACTGACTGACGCTC AACAGGAACCCGACGCCACT
Downstream 100 bases:
>100_bases CCGGCCGGCGGCACCTGCACGCCGCCCCGGCCCGACAGCCCGGCCCGGCCCGCCAGACGGCGCGCCGGGCTTTTTTTCGC CTGCTTGAATTCGGGTGCGA
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKPTQALEFVAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKLALAALENFYNRARDALSVDDIQL ALVEVRHTAGNGRQDTLDVRFRGDPDHPFDDPIVQLDASEPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTLGVG PAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRGIALTRF TSADVVRHPLVARIVEAYDEFHAQHQDG
Sequences:
>Translated_348_residues MKPTQALEFVAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKLALAALENFYNRARDALSVDDIQL ALVEVRHTAGNGRQDTLDVRFRGDPDHPFDDPIVQLDASEPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTLGVG PAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRGIALTRF TSADVVRHPLVARIVEAYDEFHAQHQDG >Mature_348_residues MKPTQALEFVAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKLALAALENFYNRARDALSVDDIQL ALVEVRHTAGNGRQDTLDVRFRGDPDHPFDDPIVQLDASEPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTLGVG PAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRGIALTRF TSADVVRHPLVARIVEAYDEFHAQHQDG
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=341, Percent_Identity=53.0791788856305, Blast_Score=325, Evalue=3e-90, Organism=Escherichia coli, GI1787257, Length=204, Percent_Identity=47.5490196078431, Blast_Score=181, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38605; Mature: 38605
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTQALEFVAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKLALA CCCHHHHHEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH ALENFYNRARDALSVDDIQLALVEVRHTAGNGRQDTLDVRFRGDPDHPFDDPIVQLDASE HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCC PDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTLGVGPAGTGKTYLAVACAVDALER CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHH DQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE HHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKS HHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC GLVEAQQVLGGVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQHQDG CHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPTQALEFVAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKLALA CCCHHHHHEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH ALENFYNRARDALSVDDIQLALVEVRHTAGNGRQDTLDVRFRGDPDHPFDDPIVQLDASE HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCC PDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTLGVGPAGTGKTYLAVACAVDALER CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHH DQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE HHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKS HHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC GLVEAQQVLGGVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQHQDG CHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]