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The map label for this gene is glpD

Identifier: 78067474

GI number: 78067474

Start: 3138616

End: 3140139

Strand: Direct

Name: glpD

Synonym: Bcep18194_A6005

Alternate gene names: 78067474

Gene position: 3138616-3140139 (Clockwise)

Preceding gene: 78067472

Following gene: 78067475

Centisome position: 84.96

GC content: 68.5

Gene sequence:

>1524_bases
GTGACCCAACCGAATCGCTACGATCTGCTCGTCGTCGGCGGCGGCATCAACGGCGCGGGCATCGCGCGCGATGCGGCCGG
CCGCGGCCTGTCGGTCATGCTCTGCGAGCAGGACGATCTCGCGTCGCACACGTCGTCGTCCAGCACGAAGCTGATTCACG
GCGGCCTGCGTTACCTCGAGTACAACGAGTTCGGGCTCGTGCGCAAGGCGCTGCAGGAGCGCGAAACGCTGCTGCGCGCG
GCGCCGCACATCATGTGGCCGCTGCGCTTTGTCATGCCGCACATGCCGAACCTGCGTCCGGCCTGGCTGATCCGCATCGG
CCTGTTCCTTTACGATCACCTCGCAAAACGCGAGCTGCTGCCCGGCTCGCGCGGCATCGACATGCGCCGCCATGCGGCCG
GCGCGCCGCTGATCGATTCGATCAAGCGCGGCTTCGTGTATTCGGACGGCTGGGTCGACGACGCGCGCCTCGTCGTGCTG
AACGCGATGGATGCGAAGGAGCGCGGCGCGGAGATCCTGACGCGCACGAAGCTGGTGTCCGCCGAACGCCGCGGCGACGA
ATGGGAAGCGCGGCTGCAGCACGCCGACGGTTCGATCCGCGTCGTGCATGCGCGCGCGATCGCGAACGCGGCCGGCCCGT
GGGTCGGCGAAGTGCTGAAAGGCGCGCTCGGCCGCGGTGCGCACCACAGCGTGCGGCTCGTGAAGGGCAGCCACATCATC
ACGCGCCGCCTGTTCGATCACGACCACGCGTACATCTTCCAGAACCCGGACAAGCGGATCATCTTCGCGATTCCGTACGA
ACACGATTTCACGCTGATCGGCACGACCGACGTCGAATACACGAACGATCCCGCGAAGGTCGCGATCGATCGCGACGAGA
CACAGTACCTGTGCGATTCGATTAACCGCTACTTCAAGCGCAAGATCTCGCCGGCCGACGTGCACTGGACCTACTCGGGC
GTGCGCCCGCTGCTGGAAGACGAAAACGCCGCGAACGCATCGGCCGTCACGCGCGACTACCGCCTCGAGCTGGACGACGG
CGCGGGCGCCCCGCTGCTGTCGGTGTTCGGCGGCAAGATCACGACGTTCCGCAAGCTCGCGGAAGAAGCCGGCGACATGC
TGTGCAGCGTGCTCGGCCGCGACGCGAAAACCTGGACGGCCGGCGTCGCGCTGCCGGGCGGCGACATCGCGAACGCGAAG
TTCGACGCATTCGCCGATACGTTCGCCAAACGCCATGCGTGGCTGCCCGCTGCGCTCGCCCGCCGCTATGCACGTGCCTA
CGGCACGCGCGCGGAGCGCGTGATCGACGGCGCGAAGTCGCTCGCCGAGCTCGGCACCGAAGTCGCACCGGGCATCTACG
ACGCCGAACTGCGCTACCTGCGCGACGCCGAATGGGCGACCCGCGCGCAGGACGTGCTGTGGCGCCGCTCGAAGCTCGGC
CTGCACGTGGCACCCGGCACACTCGACGCGGTGACCGCCGCGGTCGATGCGTGGTTCGCCGCCGCGCACGCGCCGCAGGC
CTGA

Upstream 100 bases:

>100_bases
GCCCCGCTTTATCGAACTTTACTTTTTCGATTTCGTTCGTTAAATTTCGAATTCGAACATTTTCTGTTCAACCATTTCCA
TCAGACGATAAGGACAGCAG

Downstream 100 bases:

>100_bases
TCCGAATGCAGTTGCAGTTGCCGTACCGACGTTGACTCACCGACGCGCCGCCCAACATGCGGCGCGCATCACAACTAAGC
CAAATCCACGGATGGAGATG

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLEYNEFGLVRKALQERETLLRA
APHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVL
NAMDAKERGAEILTRTKLVSAERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLKGALGRGAHHSVRLVKGSHII
TRRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDSINRYFKRKISPADVHWTYSG
VRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKITTFRKLAEEAGDMLCSVLGRDAKTWTAGVALPGGDIANAK
FDAFADTFAKRHAWLPAALARRYARAYGTRAERVIDGAKSLAELGTEVAPGIYDAELRYLRDAEWATRAQDVLWRRSKLG
LHVAPGTLDAVTAAVDAWFAAAHAPQA

Sequences:

>Translated_507_residues
MTQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLEYNEFGLVRKALQERETLLRA
APHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVL
NAMDAKERGAEILTRTKLVSAERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLKGALGRGAHHSVRLVKGSHII
TRRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDSINRYFKRKISPADVHWTYSG
VRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKITTFRKLAEEAGDMLCSVLGRDAKTWTAGVALPGGDIANAK
FDAFADTFAKRHAWLPAALARRYARAYGTRAERVIDGAKSLAELGTEVAPGIYDAELRYLRDAEWATRAQDVLWRRSKLG
LHVAPGTLDAVTAAVDAWFAAAHAPQA
>Mature_506_residues
TQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLEYNEFGLVRKALQERETLLRAA
PHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVLN
AMDAKERGAEILTRTKLVSAERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLKGALGRGAHHSVRLVKGSHIIT
RRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDSINRYFKRKISPADVHWTYSGV
RPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKITTFRKLAEEAGDMLCSVLGRDAKTWTAGVALPGGDIANAKF
DAFADTFAKRHAWLPAALARRYARAYGTRAERVIDGAKSLAELGTEVAPGIYDAELRYLRDAEWATRAQDVLWRRSKLGL
HVAPGTLDAVTAAVDAWFAAAHAPQA

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=520, Percent_Identity=27.8846153846154, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI285002231, Length=520, Percent_Identity=27.8846153846154, Blast_Score=167, Evalue=1e-41,
Organism=Escherichia coli, GI2367226, Length=454, Percent_Identity=49.7797356828194, Blast_Score=434, Evalue=1e-123,
Organism=Escherichia coli, GI1788574, Length=491, Percent_Identity=27.6985743380855, Blast_Score=102, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI115534726, Length=512, Percent_Identity=29.4921875, Blast_Score=161, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI17509253, Length=519, Percent_Identity=28.7090558766859, Blast_Score=150, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6322036, Length=569, Percent_Identity=27.5922671353251, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI161077125, Length=527, Percent_Identity=29.4117647058824, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24653942, Length=527, Percent_Identity=29.4117647058824, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24653944, Length=527, Percent_Identity=29.4117647058824, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI20130025, Length=527, Percent_Identity=29.4117647058824, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24586295, Length=384, Percent_Identity=28.125, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19921278, Length=516, Percent_Identity=24.8062015503876, Blast_Score=95, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 55996; Mature: 55865

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00977 FAD_G3PDH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLE
CCCCCCEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCCHHCCCCCCCCEEEECCHHHEE
YNEFGLVRKALQERETLLRAAPHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVLNAMDAKERGAEILTRTKLVS
CCCCCCCHHHHHCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLKGALGRGAHHSVRLVKGSHII
HHHCCCHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
TRRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDS
HHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEECCCCCEEEECCCHHHHHHHH
INRYFKRKISPADVHWTYSGVRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKI
HHHHHHHCCCCCCEEEECCCCCCHHCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHCCCH
TTFRKLAEEAGDMLCSVLGRDAKTWTAGVALPGGDIANAKFDAFADTFAKRHAWLPAALA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
RRYARAYGTRAERVIDGAKSLAELGTEVAPGIYDAELRYLRDAEWATRAQDVLWRRSKLG
HHHHHHHCCHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCC
LHVAPGTLDAVTAAVDAWFAAAHAPQA
EEECCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLE
CCCCCEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCCHHCCCCCCCCEEEECCHHHEE
YNEFGLVRKALQERETLLRAAPHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVLNAMDAKERGAEILTRTKLVS
CCCCCCCHHHHHCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLKGALGRGAHHSVRLVKGSHII
HHHCCCHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
TRRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDS
HHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEECCCCCEEEECCCHHHHHHHH
INRYFKRKISPADVHWTYSGVRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKI
HHHHHHHCCCCCCEEEECCCCCCHHCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHCCCH
TTFRKLAEEAGDMLCSVLGRDAKTWTAGVALPGGDIANAKFDAFADTFAKRHAWLPAALA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
RRYARAYGTRAERVIDGAKSLAELGTEVAPGIYDAELRYLRDAEWATRAQDVLWRRSKLG
HHHHHHHCCHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCC
LHVAPGTLDAVTAAVDAWFAAAHAPQA
EEECCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8157588; 10984043 [H]