| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is proP [H]
Identifier: 78067451
GI number: 78067451
Start: 3112698
End: 3114356
Strand: Direct
Name: proP [H]
Synonym: Bcep18194_A5982
Alternate gene names: 78067451
Gene position: 3112698-3114356 (Clockwise)
Preceding gene: 78067450
Following gene: 78067452
Centisome position: 84.26
GC content: 65.22
Gene sequence:
>1659_bases ATGGCAACGTTAGGCGGGCAAATTTCGCACGCGCCGATGACGGGCGAAGAGAAGAAGGTGATCTTCGCGTCGTCGCTCGG CACCGTGTTCGAGTGGTACGACTTTTACCTGGCCGGCTCGCTCGCGGCCTACATCAGCAAGAGTTTCTTCTCCGGTGTCA ATCCAACTGCCGCCTTCATCTTCACGCTGCTCGGCTTCGCGGCCGGCTTCGCGGTGCGGCCGTTCGGCGCGATCGTGTTC GGCCGGCTCGGCGACCTCGTCGGACGCAAGCACACGTTCCTCGTAACGATCGTGATCATGGGCCTCTCGACGTTCGTGGT CGGCTTCCTGCCCGGCTACGCATCGATCGGCATCGCCGCGCCCGTGATCTTCATCGCGATGCGGCTGTTGCAGGGCCTCG CGCTCGGCGGCGAGTACGGCGGCGCGGCGACCTACGTCGCCGAGCATGCGCCGGCCAACCGTCGCGGCTTCTACACCGCG TGGATCCAGACGACCGCCACGCTCGGCCTGTTCCTGTCGCTGCTCGTGATCCTCGGCATCCGCACGCTCATCGGCGAGGA AGCGTTCGGCAACTGGGGCTGGCGCGTGCCGTTCGTCGCGTCGATCCTGCTGCTCGCGGTGTCGGTATGGATCCGGATGC AACTGAACGAATCGCCGGTGTTCCTGCGCATCAAGGCGGAAGGCAAGACGTCGAAGGCGCCGCTGACCGAAGCGTTCGGC CAGTGGAAGAACCTGAAGATCGTGATCCTCGCGCTCGTCGGCCTAACCGCCGGCCAGGCTGTCGTGTGGTACACGGGCCA GTTCTACGCGCTGTTCTTCCTCACGCAGACGCTGAAGGTGGACGGGGCAAGCGCGAACATCCTGATCGCGATCGCGCTCC TGATCGGCACGCCGTTCTTCCTGTTCTTCGGGTCGCTGTCGGACAAGATCGGCCGCAAGCCGATCATCCTCGCGGGCTGC CTGATCGCGGCGCTGACCTACTTCCCGCTGTTCAAGGCGCTCACGCACTACGCGAACCCGCAGCTCGAACTCGCGACGCA GAAGGCGCCGATCACGGTCATCGCCGATCCGGCCGCCTGCTCGTTCCAGTTCAACCCGGTGGGCACGTCGAAGTTCACGA ACTCGTGCGACGTCGCGAAGAGCGCGCTCGCGAAGGCCGGCCTGAACTACGAGAACGTCGCGGCACCGGCTGGCGCGACA GCCCAGATCAAGGTCGGCGACACGGTGGTCCCCGCCTATGAAGGCAAGGCGGCCGACGCGAAGGCGCAGGGTGCGGCGTT CGACAAGACGCTCGCGTCGACGCTGAAGGCGGCCGGCTACCCGGCGAAGGCGGACCCGGCGCAGCTCAACTGGCCGATGA CGATCGTGATCCTGACGATCCTCGTGATCTACGTGACGATGGTCTACGGCCCGATCGCGGCGATGCTGGTCGAGATGTTC CCGACGCGGATCCGCTACACGTCGATGTCGCTGCCCTATCACATCGGCAACGGCTGGTTCGGCGGCTTCCTGCCGGCCAC CGCGTTCGCGATCGTCGCGGCGAAGGGCGACATCTACTCGGGCCTCTGGTATCCGATCGTGATCGCGCTGGCCACGTTCG TGATCGGGCTGCTGTTCGTCAAGGAGACGAAGGACTCGAACATCTACGCTCAGGATTGA
Upstream 100 bases:
>100_bases CGCGAGTCAGTCGGCCGTAAGTTTCCGTACCAATAATCCTCGACAGGCCCGCTCACCCAAGGCGGCCGCACATCTATATC AAGGGACTTGGAGACGACTC
Downstream 100 bases:
>100_bases GGGGGATGTGCGGACGGTTGCCGGCGGTGCACGGTGATCGTCCGCAACAAGGTCGGCACGGGCCGCCGGCGCCTTTTTCA CGGATGATGAAAAAAGGTGT
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MATLGGQISHAPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDLVGRKHTFLVTIVIMGLSTFVVGFLPGYASIGIAAPVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTA WIQTTATLGLFLSLLVILGIRTLIGEEAFGNWGWRVPFVASILLLAVSVWIRMQLNESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFFLFFGSLSDKIGRKPIILAGC LIAALTYFPLFKALTHYANPQLELATQKAPITVIADPAACSFQFNPVGTSKFTNSCDVAKSALAKAGLNYENVAAPAGAT AQIKVGDTVVPAYEGKAADAKAQGAAFDKTLASTLKAAGYPAKADPAQLNWPMTIVILTILVIYVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGDIYSGLWYPIVIALATFVIGLLFVKETKDSNIYAQD
Sequences:
>Translated_552_residues MATLGGQISHAPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDLVGRKHTFLVTIVIMGLSTFVVGFLPGYASIGIAAPVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTA WIQTTATLGLFLSLLVILGIRTLIGEEAFGNWGWRVPFVASILLLAVSVWIRMQLNESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFFLFFGSLSDKIGRKPIILAGC LIAALTYFPLFKALTHYANPQLELATQKAPITVIADPAACSFQFNPVGTSKFTNSCDVAKSALAKAGLNYENVAAPAGAT AQIKVGDTVVPAYEGKAADAKAQGAAFDKTLASTLKAAGYPAKADPAQLNWPMTIVILTILVIYVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGDIYSGLWYPIVIALATFVIGLLFVKETKDSNIYAQD >Mature_551_residues ATLGGQISHAPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVFG RLGDLVGRKHTFLVTIVIMGLSTFVVGFLPGYASIGIAAPVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTAW IQTTATLGLFLSLLVILGIRTLIGEEAFGNWGWRVPFVASILLLAVSVWIRMQLNESPVFLRIKAEGKTSKAPLTEAFGQ WKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFFLFFGSLSDKIGRKPIILAGCL IAALTYFPLFKALTHYANPQLELATQKAPITVIADPAACSFQFNPVGTSKFTNSCDVAKSALAKAGLNYENVAAPAGATA QIKVGDTVVPAYEGKAADAKAQGAAFDKTLASTLKAAGYPAKADPAQLNWPMTIVILTILVIYVTMVYGPIAAMLVEMFP TRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGDIYSGLWYPIVIALATFVIGLLFVKETKDSNIYAQD
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=328, Percent_Identity=35.3658536585366, Blast_Score=198, Evalue=7e-52, Organism=Escherichia coli, GI1788292, Length=327, Percent_Identity=34.5565749235474, Blast_Score=185, Evalue=5e-48, Organism=Escherichia coli, GI1788942, Length=323, Percent_Identity=34.984520123839, Blast_Score=168, Evalue=9e-43, Organism=Escherichia coli, GI1789941, Length=220, Percent_Identity=42.7272727272727, Blast_Score=151, Evalue=9e-38, Organism=Escherichia coli, GI87082231, Length=213, Percent_Identity=27.6995305164319, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082404, Length=317, Percent_Identity=25.2365930599369, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 58950; Mature: 58819
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLGGQISHAPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDLVGRKHTFLVTIVIMGLSTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTAWIQTTATLGLFLSLLVILGI HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH RTLIGEEAFGNWGWRVPFVASILLLAVSVWIRMQLNESPVFLRIKAEGKTSKAPLTEAFG HHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFF CCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH LFFGSLSDKIGRKPIILAGCLIAALTYFPLFKALTHYANPQLELATQKAPITVIADPAAC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEE SFQFNPVGTSKFTNSCDVAKSALAKAGLNYENVAAPAGATAQIKVGDTVVPAYEGKAADA EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCEEECCCCCCCCCC KAQGAAFDKTLASTLKAAGYPAKADPAQLNWPMTIVILTILVIYVTMVYGPIAAMLVEMF CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGDIYSGLWYPIVIALATFVIGLLFV HHHEEEEEECCCEEECCCCCCHHHHHHHHHHHEECCCHHCCHHHHHHHHHHHHHHHHHHH KETKDSNIYAQD EECCCCCCEECC >Mature Secondary Structure ATLGGQISHAPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDLVGRKHTFLVTIVIMGLSTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTAWIQTTATLGLFLSLLVILGI HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH RTLIGEEAFGNWGWRVPFVASILLLAVSVWIRMQLNESPVFLRIKAEGKTSKAPLTEAFG HHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFF CCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH LFFGSLSDKIGRKPIILAGCLIAALTYFPLFKALTHYANPQLELATQKAPITVIADPAAC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEE SFQFNPVGTSKFTNSCDVAKSALAKAGLNYENVAAPAGATAQIKVGDTVVPAYEGKAADA EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCEEECCCCCCCCCC KAQGAAFDKTLASTLKAAGYPAKADPAQLNWPMTIVILTILVIYVTMVYGPIAAMLVEMF CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGDIYSGLWYPIVIALATFVIGLLFV HHHEEEEEECCCEEECCCCCCHHHHHHHHHHHEECCCHHCCHHHHHHHHHHHHHHHHHHH KETKDSNIYAQD EECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]