Click here to switch to the map view.

The map label for this gene is recA

Identifier: 78067448

GI number: 78067448

Start: 3108905

End: 3109951

Strand: Reverse

Name: recA

Synonym: Bcep18194_A5979

Alternate gene names: 78067448

Gene position: 3109951-3108905 (Counterclockwise)

Preceding gene: 78067453

Following gene: 78067447

Centisome position: 84.19

GC content: 62.75

Gene sequence:

>1047_bases
ATGACCGCCGAGAAGAGCAAGGCGCTGGCCGCCGCGCTTGCCCAGATCGAAAAGCAGTTCGGCAAGGGCTCGATCATGCG
CATGGGCGACGGCGAGGCGACCGAGAACATCCAGGTCGTGTCCACGGGCTCGCTCGGTCTCGATATCGCGCTCGGCGTCG
GCGGCCTGCCGCGCGGCCGGGTGGTCGAAATCTACGGTCCGGAATCGTCCGGTAAAACCACGCTCACGCTGCAGGTCATT
GCCGAACTGCAGAAGATCGGCGGCACCGCAGCGTTCATCGACGCCGAGCACGCGCTCGACGTTCAATATGCAGCGAAGCT
CGGCGTGAACGTGCCGGAGCTGCTGATCTCGCAGCCGGACACCGGCGAGCAGGCGCTTGAAATCACCGACGCGCTGGTGC
GCTCGGGCTCGATCGACATGATCGTCATCGACTCGGTCGCGGCGCTCGTGCCGAAGGCCGAAATCGAAGGCGAGATGGGC
GATTCGTTGCCGGGCCTGCAGGCCCGCCTGATGTCGCAGGCGCTGCGCAAGCTGACCGGCACGATCAAGCGCACGAACTG
CCTGGTGATCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTCGGCAACCCGGAAACCACGACGGGCGGTAACG
CGCTGAAGTTCTACTCGTCGGTGCGTCTCGACATTCGCCGGATCGGCTCGATCAAGAAGAACGACGAGGTGATCGGCAAC
GAAACCCGCGTGAAGGTCGTCAAGAACAAGGTGTCGCCGCCGTTCCGCGAAGCGATCTTCGACATCCTGTATGGCGAAGG
CATTTCGCGTCAGGGCGAGATCATCGATCTCGGCGTGCAGGCGAAGATCGTCGACAAGGCGGGCGCTTGGTACAGCTACA
ACGGCGAGAAGATCGGCCAGGGCAAGGACAACGCGCGTGAATTCTTGCGCGAGAATCCGGAAATCGCACGCGAGATCGAG
AACCGCATTCGCGAATCGCTTGGCGTGGTCGCCATGCCTGATGGTGCAGGCCAGGACGAAGCCGAGGCGATGGACGAAGA
AGAGTGA

Upstream 100 bases:

>100_bases
CTGCATTCGTGGGCGGCGCTTGAAAGCGGGCGCGCCTCTAACAGACGCTGCTCATCATAGCAAAGGACGATTCATGGAAG
ATAGCAAGAAGGGCTCCGGG

Downstream 100 bases:

>100_bases
TGGTCGGGCGCCGAGGTCAGGCTGGCGAGCCGGAGGAGAGCGACACGCCCGAAACGGCGGGCCGCTCCGGCCGGCGAACC
GGATCCTCGAGCGCCGATCG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTAEKSKALAAALAQIEKQFGKGSIMRMGDGEATENIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVI
AELQKIGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALEITDALVRSGSIDMIVIDSVAALVPKAEIEGEMG
DSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGN
ETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNAREFLRENPEIAREIE
NRIRESLGVVAMPDGAGQDEAEAMDEEE

Sequences:

>Translated_348_residues
MTAEKSKALAAALAQIEKQFGKGSIMRMGDGEATENIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVI
AELQKIGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALEITDALVRSGSIDMIVIDSVAALVPKAEIEGEMG
DSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGN
ETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNAREFLRENPEIAREIE
NRIRESLGVVAMPDGAGQDEAEAMDEEE
>Mature_347_residues
TAEKSKALAAALAQIEKQFGKGSIMRMGDGEATENIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVIA
ELQKIGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALEITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGD
SLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGNE
TRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNAREFLRENPEIAREIEN
RIRESLGVVAMPDGAGQDEAEAMDEEE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=323, Percent_Identity=71.8266253869969, Blast_Score=478, Evalue=1e-136,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37416; Mature: 37285

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEKSKALAAALAQIEKQFGKGSIMRMGDGEATENIQVVSTGSLGLDIALGVGGLPRGR
CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCC
VVEIYGPESSGKTTLTLQVIAELQKIGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPD
EEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCHHHHCCCCC
TGEQALEITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTG
CCHHHHHHHHHHHHCCCCCEEECCHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGN
HHHHCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCC
ETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQ
CCEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCC
GKDNAREFLRENPEIAREIENRIRESLGVVAMPDGAGQDEAEAMDEEE
CCHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
TAEKSKALAAALAQIEKQFGKGSIMRMGDGEATENIQVVSTGSLGLDIALGVGGLPRGR
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCC
VVEIYGPESSGKTTLTLQVIAELQKIGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPD
EEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCHHHHCCCCC
TGEQALEITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTG
CCHHHHHHHHHHHHCCCCCEEECCHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGN
HHHHCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCC
ETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQ
CCEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCC
GKDNAREFLRENPEIAREIENRIRESLGVVAMPDGAGQDEAEAMDEEE
CCHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA