| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067421
Identifier: 78067421
GI number: 78067421
Start: 3081170
End: 3082297
Strand: Direct
Name: 78067421
Synonym: Bcep18194_A5952
Alternate gene names: NA
Gene position: 3081170-3082297 (Clockwise)
Preceding gene: 78067420
Following gene: 78067431
Centisome position: 83.41
GC content: 67.38
Gene sequence:
>1128_bases ATGCAGACACAACAACACGCACCCGCCCGCACCCGTCAGCGCATGCTGCGCACCGCGCAAGTCGCGATCGCCGGCGCCGC GCTCGCGCTGCTCGCCGCATGCGGCGGCGGTGACGACAACAACAACAGCGCATCGAACACGCCGCCGTCGGGCGTGAAAA TGCAGGTCGTGTCGTTCGGCGACAGCCTGTCCGACGCAGGCACCTACTCGCAGATCAAGCTCGGCTTCGGCGGCGGCCGC TTCACGACCAACCCGGGCCAGGTGTGGACGCAGAACGTCGCGCAATACTACGGCGACACGCTGCAGCCCGCGAACCAGGG CGGGTTCGGGATTCCGCTGCAGGCCACCGGCGGCCTCGGCTACGCACAGGGCGGCTCGCGCGTGACGCAACAGCCGGGCA TCGGCCACGCTGACGCCAGCGTGCCGAACGCCGACTACGCGCAAGCGACCACGACGCCGATCGCCGACCAGGTCAAGCAA TACGTGGCACAGCACGGCAGCTTCAACGCCGGCCAGGTCGTGCTGCTGAACGGCGGCGCGAACGACATCTTCTACCAGGT CGCGGCGCTGCAGGCCGGCGCGATCACGCCGACGCAACTGCAGCAGAACATCGGCGCCGCCGCGCAACAGCTCGCGGGCA TCGTGCAGCAGATCGTCGCCGCCGGCGCAACGCACGTGTTCGTGTCGAACGTGCCGGATATCGGCGGCACGCCGCTCGCG CTGCAAGGCGGCACGCAGACGACCCTCACGCAACTGTCGATGCTGTTCAACGGCACGCTCGCCGCGACGCTGCAGGCACT CAAGGTCGACACGACCAAGTACGTGCTGCTCGACACGTTCACGTGGCAGGACGGCATCCTCGCGAACTACAAGGCGAACG GCTTCGCGGTGTCGAACACCGACACGGCCTGTAACCTGAAGGCGATGGTCCAGGCCGCCACGCAGTACGGCGTCGCGAAC GCAACCGCATTCGGCTCGTCGCTGTTCTGCTCGCAGCAGACCTACACGGTCGCAAACGCGGACCAGACCTACATGTTCGC CGACACGGTCCACCCGACGACGCGCCTGCATGCACTGTTCGCGCAGTACGTCGAACAGCAGATCGCGAAGTCCGGCGTCG GCAAGTAA
Upstream 100 bases:
>100_bases AATAAACCGTTTCAGCCAACGGCCGCCGCGCAGCCCGGAACCGAGCAGGCACGCGGCAGATGAGAAACACATCAGGCCAT ATCTACGAGGAGATCGAACG
Downstream 100 bases:
>100_bases GCCGCCGACCACGCGCCCAAACGAAAACGCCCGACCGGTTTGCCGGTCGGGCGTTTTTTCATTCCAGTGCCGGGATTGGC GTCAGTCGCGCGCTTCGAAC
Product: phospholipase/lecithinase/hemolysin-like
Products: NA
Alternate protein names: GDSL Family Lipase; Outer Membrane Autotransporter Barrel; Lipase; Lipase / Esterase Protein; Lipase/Esterase; Phospholipase/Lecithinase/Hemolysin-Like Protein; Outer Membrane Autotransporter; Triacylglycerol Lipase/Esterase Protein; Lipase / Esterase; Esterase; Moraxella Catarrhalis Adherence Protein McaP; Outer Membrane Esterase; EstA Protein; Phospholipase/Lecithinase/Hemolysin-Like; Outer Membrane Autotransporter Barrel Domain Protein; Autotransporter Carboxylic Ester Hydrolase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MQTQQHAPARTRQRMLRTAQVAIAGAALALLAACGGGDDNNNSASNTPPSGVKMQVVSFGDSLSDAGTYSQIKLGFGGGR FTTNPGQVWTQNVAQYYGDTLQPANQGGFGIPLQATGGLGYAQGGSRVTQQPGIGHADASVPNADYAQATTTPIADQVKQ YVAQHGSFNAGQVVLLNGGANDIFYQVAALQAGAITPTQLQQNIGAAAQQLAGIVQQIVAAGATHVFVSNVPDIGGTPLA LQGGTQTTLTQLSMLFNGTLAATLQALKVDTTKYVLLDTFTWQDGILANYKANGFAVSNTDTACNLKAMVQAATQYGVAN ATAFGSSLFCSQQTYTVANADQTYMFADTVHPTTRLHALFAQYVEQQIAKSGVGK
Sequences:
>Translated_375_residues MQTQQHAPARTRQRMLRTAQVAIAGAALALLAACGGGDDNNNSASNTPPSGVKMQVVSFGDSLSDAGTYSQIKLGFGGGR FTTNPGQVWTQNVAQYYGDTLQPANQGGFGIPLQATGGLGYAQGGSRVTQQPGIGHADASVPNADYAQATTTPIADQVKQ YVAQHGSFNAGQVVLLNGGANDIFYQVAALQAGAITPTQLQQNIGAAAQQLAGIVQQIVAAGATHVFVSNVPDIGGTPLA LQGGTQTTLTQLSMLFNGTLAATLQALKVDTTKYVLLDTFTWQDGILANYKANGFAVSNTDTACNLKAMVQAATQYGVAN ATAFGSSLFCSQQTYTVANADQTYMFADTVHPTTRLHALFAQYVEQQIAKSGVGK >Mature_375_residues MQTQQHAPARTRQRMLRTAQVAIAGAALALLAACGGGDDNNNSASNTPPSGVKMQVVSFGDSLSDAGTYSQIKLGFGGGR FTTNPGQVWTQNVAQYYGDTLQPANQGGFGIPLQATGGLGYAQGGSRVTQQPGIGHADASVPNADYAQATTTPIADQVKQ YVAQHGSFNAGQVVLLNGGANDIFYQVAALQAGAITPTQLQQNIGAAAQQLAGIVQQIVAAGATHVFVSNVPDIGGTPLA LQGGTQTTLTQLSMLFNGTLAATLQALKVDTTKYVLLDTFTWQDGILANYKANGFAVSNTDTACNLKAMVQAATQYGVAN ATAFGSSLFCSQQTYTVANADQTYMFADTVHPTTRLHALFAQYVEQQIAKSGVGK
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38892; Mature: 38892
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQQHAPARTRQRMLRTAQVAIAGAALALLAACGGGDDNNNSASNTPPSGVKMQVVSFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECC DSLSDAGTYSQIKLGFGGGRFTTNPGQVWTQNVAQYYGDTLQPANQGGFGIPLQATGGLG CCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCC YAQGGSRVTQQPGIGHADASVPNADYAQATTTPIADQVKQYVAQHGSFNAGQVVLLNGGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC NDIFYQVAALQAGAITPTQLQQNIGAAAQQLAGIVQQIVAAGATHVFVSNVPDIGGTPLA CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEE LQGGTQTTLTQLSMLFNGTLAATLQALKVDTTKYVLLDTFTWQDGILANYKANGFAVSNT ECCCCHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEEEEEECCCCCEEEECCCCEEECCC DTACNLKAMVQAATQYGVANATAFGSSLFCSQQTYTVANADQTYMFADTVHPTTRLHALF CCCHHHHHHHHHHHHHCCCHHHHCCCHHEECCCEEEEECCCCEEEEEECCCCHHHHHHHH AQYVEQQIAKSGVGK HHHHHHHHHHHCCCC >Mature Secondary Structure MQTQQHAPARTRQRMLRTAQVAIAGAALALLAACGGGDDNNNSASNTPPSGVKMQVVSFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECC DSLSDAGTYSQIKLGFGGGRFTTNPGQVWTQNVAQYYGDTLQPANQGGFGIPLQATGGLG CCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCC YAQGGSRVTQQPGIGHADASVPNADYAQATTTPIADQVKQYVAQHGSFNAGQVVLLNGGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC NDIFYQVAALQAGAITPTQLQQNIGAAAQQLAGIVQQIVAAGATHVFVSNVPDIGGTPLA CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEE LQGGTQTTLTQLSMLFNGTLAATLQALKVDTTKYVLLDTFTWQDGILANYKANGFAVSNT ECCCCHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEEEEEECCCCCEEEECCCCEEECCC DTACNLKAMVQAATQYGVANATAFGSSLFCSQQTYTVANADQTYMFADTVHPTTRLHALF CCCHHHHHHHHHHHHHCCCHHHHCCCHHEECCCEEEEECCCCEEEEEECCCCHHHHHHHH AQYVEQQIAKSGVGK HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA