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The map label for this gene is scrK [H]

Identifier: 78067397

GI number: 78067397

Start: 3052252

End: 3053208

Strand: Reverse

Name: scrK [H]

Synonym: Bcep18194_A5928

Alternate gene names: 78067397

Gene position: 3053208-3052252 (Counterclockwise)

Preceding gene: 78067398

Following gene: 78067396

Centisome position: 82.65

GC content: 70.32

Gene sequence:

>957_bases
ATGGCCGAGATCGTCGTTGCCGGCGAACTGCTCGCCGAATTCGTCGCCGCCGAGCGCGGCCAGGGTTTCGATGCGCCGGG
CCTGTTCGAAGGGCCGTTTCCGAGCGGTGCGCCGGCAATCTTCGCCGACCAGGCCGCGCGGCTCGGCGCACGCGTCGCGT
ATGCGGGCTGCGTCGGTCGCGATGCATTCGGCGACGCGATCGTCGCGCGGCTCGAACGCGATGGCGTCGACGTCGCGCGC
ATCCGTCGCGTCGCGCGCCCGACCGGCACCGCGTTCGTCGCGTATCGCGAAGACGGCTCGCGCAGCTTCGTCTATACGCT
GTCCACCAGCGCGGCCGCGTGCGTCGATGCGCCCGATGTCGATACCGCGATGTTCGACGGCTGCCGCTATTTCCACGTGA
TGGGCTCGTCGCTGACGAGCGAATCGGCGATCGCGGCCGTGCAGCGCGGCGTGATCGAGGCGGCGCGCGCCGGCGCGAAA
GTGTCGTTCGATCCGAACGTGCGGCCCGAAATGCTGAGCTTTCGCCCGATGCGCGCGGCACTCGACGTGATGCTCGACGC
ATGCCACCTGTTCCTGCCGAGCGAAGCCGATCTGCCGTTCTTCTGCGGGCCGCAGCCGGCCGAGCGCGCGATCGCGGGCC
TGCTCGCGACGCATCCGCTGCTCGAACGTGTCGTGCTGAAACGCGGCGCGCAAGGCAGCGTCGCGTTCGATCGCGCGAAC
CGGGCGGAGGCTCCGGCGTTTCAGGTCGATGAACTCGACCCGACCGGAGCCGGCGACTGCTTCGGCGGCACGCTGGTCGC
GAGCCTCGTCGCCGGCATGCCGATCGAGGTCGCACTGCGCCGCGCGAACGCGGCCGGGGCGATCGCGGTCACGCGGCGCG
GCCCGATGGAAGGTAACAGCAGCGCGGCCGAAATCGACCGCTTCCTGACCGAACGAGGTATTGCATGTCCGGCCTGA

Upstream 100 bases:

>100_bases
CTGATATGGTGCCGCTCGCACGCGCCATTTGCCGGCCGGCTCGCGACGCAGCGGTGTCGCCGCACGCCGCGGCCGCCGTC
GAACGAGGAGGGGCCGCCTG

Downstream 100 bases:

>100_bases
CGACCTTCGCCGAACGCTCGCGCACCGCGCATGCGGACGCGGTGCTGCGGATGATCTTCGACGCGAACCGCGCGGACGCG
CAGCGCGGCATCTATTCGAT

Product: ribokinase family sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAEIVVAGELLAEFVAAERGQGFDAPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGRDAFGDAIVARLERDGVDVAR
IRRVARPTGTAFVAYREDGSRSFVYTLSTSAAACVDAPDVDTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAK
VSFDPNVRPEMLSFRPMRAALDVMLDACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAN
RAEAPAFQVDELDPTGAGDCFGGTLVASLVAGMPIEVALRRANAAGAIAVTRRGPMEGNSSAAEIDRFLTERGIACPA

Sequences:

>Translated_318_residues
MAEIVVAGELLAEFVAAERGQGFDAPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGRDAFGDAIVARLERDGVDVAR
IRRVARPTGTAFVAYREDGSRSFVYTLSTSAAACVDAPDVDTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAK
VSFDPNVRPEMLSFRPMRAALDVMLDACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAN
RAEAPAFQVDELDPTGAGDCFGGTLVASLVAGMPIEVALRRANAAGAIAVTRRGPMEGNSSAAEIDRFLTERGIACPA
>Mature_317_residues
AEIVVAGELLAEFVAAERGQGFDAPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGRDAFGDAIVARLERDGVDVARI
RRVARPTGTAFVAYREDGSRSFVYTLSTSAAACVDAPDVDTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAKV
SFDPNVRPEMLSFRPMRAALDVMLDACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRANR
AEAPAFQVDELDPTGAGDCFGGTLVASLVAGMPIEVALRRANAAGAIAVTRRGPMEGNSSAAEIDRFLTERGIACPA

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082281, Length=263, Percent_Identity=26.2357414448669, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790193, Length=269, Percent_Identity=26.0223048327138, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI87081971, Length=275, Percent_Identity=24.7272727272727, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17532905, Length=322, Percent_Identity=27.9503105590062, Blast_Score=87, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.4 [H]

Molecular weight: Translated: 33267; Mature: 33136

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIVVAGELLAEFVAAERGQGFDAPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGR
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DAFGDAIVARLERDGVDVARIRRVARPTGTAFVAYREDGSRSFVYTLSTSAAACVDAPDV
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCC
DTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAKVSFDPNVRPEMLSFRPMRAA
CHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCHHHHH
LDVMLDACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAN
HHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
RAEAPAFQVDELDPTGAGDCFGGTLVASLVAGMPIEVALRRANAAGAIAVTRRGPMEGNS
CCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCC
SAAEIDRFLTERGIACPA
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AEIVVAGELLAEFVAAERGQGFDAPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGR
CEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DAFGDAIVARLERDGVDVARIRRVARPTGTAFVAYREDGSRSFVYTLSTSAAACVDAPDV
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCC
DTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAKVSFDPNVRPEMLSFRPMRAA
CHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCHHHHH
LDVMLDACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAN
HHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
RAEAPAFQVDELDPTGAGDCFGGTLVASLVAGMPIEVALRRANAAGAIAVTRRGPMEGNS
CCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCC
SAAEIDRFLTERGIACPA
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809835 [H]