| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is estB [H]
Identifier: 78067389
GI number: 78067389
Start: 3043561
End: 3044757
Strand: Reverse
Name: estB [H]
Synonym: Bcep18194_A5920
Alternate gene names: 78067389
Gene position: 3044757-3043561 (Counterclockwise)
Preceding gene: 78067391
Following gene: 78067388
Centisome position: 82.42
GC content: 72.93
Gene sequence:
>1197_bases ATGTCATCCCTGCCTGTCTCCGCTGTGCGCGCGGAACCGGACGCCGCGCTGCGCCACCGGCTCGACGATGCGCTCGATCG CGCGCTTGCCGACGCGCGCATGGTCGGTGCGGTCGTGCTGGTCGCGCGGGACGGCGAGCTGCGCTATGCGCGCGCCGTCG GGCTTGCCGATCGCGAAGCCGGCACGCCGATGCGGGAAGACGCGCTGTTCCGTCTGTCGTCGGTCACGAAGCCGGTCGTG GCGGCCGCCGCGATGCGGCTGGTCGCGGCAGGCAGCATCGCGCTCGACGATCCGGTCACGCGCTGGTTGCCCGGGTTCCG TCCGGCGTTGCCAGACGGCACGCCTGCCGTCATCACGTTGCGTCATCTGCTATCGCATACGGCCGGCCTCGGCTACCGCT TCCTCGAAGCGGACGGCGACGGCCCGTATGCGCGCGCCAGCGTGTCCGACGGGATGGATCGCTCGGGTCTGTCGCTCGCC GAGAACCTGCGGCGCATCGCCGGCGTGCCGCTGCAGTTCGCGCCGGGCACGTCGTGGGGCTATTCGCTCGCGATCGACGT GGTCGGCGCGCTGATCGAGGCGGTCGACGGGCGGCCGCTCGCCGACGCGGTGGCCGCACTCGTCACGACACCGCTCGGGA TGACCGACACCGCGTTCGTCGCGCCCGACGCCACGCGCTTCGCGACGCCGTACGTGAGCACGCCGGGCGCCCCGCGCCGG ATGGCGGACGTCGATCTCGTGCCGGTGTTCGACGGCACGATCGGCATCCGCTTCGAGCCGGCGCGCGCGTTCGATGTCGA TGCGTGGCCGTCGGGCGGCGCGGGGATGGTCGGTACCGCGCGCGACTGCGTGACGCTGCTCGACACGCTGCGCACGGGCC GTGACGGTTGGCTTGGGCGCGCATGGACCGACGAGATGGCGCGCGCGCAGCCGGGTGCGCACGACCTGCGGGATGCGCCG GGTTTCGGCTTCGGGCTCGGCTTTTCGGTGCTGCGCGACCCGGTGGCCGCGCAGTCGCCGGAGTCGGTCGGCACCTGGCG CGGCGGCGGCGCATACGGGCATACGTGGTTCGTCGACCGCGCGGCCGGGCTGACGGTCGTCGCGCTGTCCAACACGCTGT ACGAGGGCCTCAATGGGCGGATCGTGACCTGTGTGCGCGATGCGGTCTACGGCGTCGGAACCGGGAGCGCGGCATGA
Upstream 100 bases:
>100_bases TGCGGACGCCGGCGTCCGGATTGTCCGGAACTCTACCCGGGTTTTTCTTCTTGCGTCGGCTCCCTACGATGAGCGCTCGT TCACTGTATGAGGTCACGCC
Downstream 100 bases:
>100_bases GCGATTGCACGTCGATCGATGACGAACTGGCCGTGCGACCGGTGCAGGCCGGCACGCGCCTGCCGGTCGCGAACCTGCTG GCGCTCGCGACGGCCGGTTT
Product: Beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSSLPVSAVRAEPDAALRHRLDDALDRALADARMVGAVVLVARDGELRYARAVGLADREAGTPMREDALFRLSSVTKPVV AAAAMRLVAAGSIALDDPVTRWLPGFRPALPDGTPAVITLRHLLSHTAGLGYRFLEADGDGPYARASVSDGMDRSGLSLA ENLRRIAGVPLQFAPGTSWGYSLAIDVVGALIEAVDGRPLADAVAALVTTPLGMTDTAFVAPDATRFATPYVSTPGAPRR MADVDLVPVFDGTIGIRFEPARAFDVDAWPSGGAGMVGTARDCVTLLDTLRTGRDGWLGRAWTDEMARAQPGAHDLRDAP GFGFGLGFSVLRDPVAAQSPESVGTWRGGGAYGHTWFVDRAAGLTVVALSNTLYEGLNGRIVTCVRDAVYGVGTGSAA
Sequences:
>Translated_398_residues MSSLPVSAVRAEPDAALRHRLDDALDRALADARMVGAVVLVARDGELRYARAVGLADREAGTPMREDALFRLSSVTKPVV AAAAMRLVAAGSIALDDPVTRWLPGFRPALPDGTPAVITLRHLLSHTAGLGYRFLEADGDGPYARASVSDGMDRSGLSLA ENLRRIAGVPLQFAPGTSWGYSLAIDVVGALIEAVDGRPLADAVAALVTTPLGMTDTAFVAPDATRFATPYVSTPGAPRR MADVDLVPVFDGTIGIRFEPARAFDVDAWPSGGAGMVGTARDCVTLLDTLRTGRDGWLGRAWTDEMARAQPGAHDLRDAP GFGFGLGFSVLRDPVAAQSPESVGTWRGGGAYGHTWFVDRAAGLTVVALSNTLYEGLNGRIVTCVRDAVYGVGTGSAA >Mature_397_residues SSLPVSAVRAEPDAALRHRLDDALDRALADARMVGAVVLVARDGELRYARAVGLADREAGTPMREDALFRLSSVTKPVVA AAAMRLVAAGSIALDDPVTRWLPGFRPALPDGTPAVITLRHLLSHTAGLGYRFLEADGDGPYARASVSDGMDRSGLSLAE NLRRIAGVPLQFAPGTSWGYSLAIDVVGALIEAVDGRPLADAVAALVTTPLGMTDTAFVAPDATRFATPYVSTPGAPRRM ADVDLVPVFDGTIGIRFEPARAFDVDAWPSGGAGMVGTARDCVTLLDTLRTGRDGWLGRAWTDEMARAQPGAHDLRDAPG FGFGLGFSVLRDPVAAQSPESVGTWRGGGAYGHTWFVDRAAGLTVVALSNTLYEGLNGRIVTCVRDAVYGVGTGSAA
Specific function: Acts on short-chain (C4-C6) fatty acid esters and triglycerides, including tertiary alcohol esters. Activity on p- nitrophenyl esters is generally higher than on o-nitrophenyl esters. Lacks beta-lactamase activity; it hydrolyzes the ester bond of cephalos
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=374, Percent_Identity=26.2032085561497, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786574, Length=224, Percent_Identity=29.4642857142857, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17550934, Length=208, Percent_Identity=29.3269230769231, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41623; Mature: 41491
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPVSAVRAEPDAALRHRLDDALDRALADARMVGAVVLVARDGELRYARAVGLADREA CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEHHHHCCCCCCC GTPMREDALFRLSSVTKPVVAAAAMRLVAAGSIALDDPVTRWLPGFRPALPDGTPAVITL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCCCCCCHHHHHH RHLLSHTAGLGYRFLEADGDGPYARASVSDGMDRSGLSLAENLRRIAGVPLQFAPGTSWG HHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCC YSLAIDVVGALIEAVDGRPLADAVAALVTTPLGMTDTAFVAPDATRFATPYVSTPGAPRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHCCCCCCCCCCCCC MADVDLVPVFDGTIGIRFEPARAFDVDAWPSGGAGMVGTARDCVTLLDTLRTGRDGWLGR CCCCEEEEEECCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC AWTDEMARAQPGAHDLRDAPGFGFGLGFSVLRDPVAAQSPESVGTWRGGGAYGHTWFVDR HHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEEC AAGLTVVALSNTLYEGLNGRIVTCVRDAVYGVGTGSAA CCCEEEEEEHHHHHHCCCCCEEEEEHHHHHCCCCCCCC >Mature Secondary Structure SSLPVSAVRAEPDAALRHRLDDALDRALADARMVGAVVLVARDGELRYARAVGLADREA CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEHHHHCCCCCCC GTPMREDALFRLSSVTKPVVAAAAMRLVAAGSIALDDPVTRWLPGFRPALPDGTPAVITL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCCCCCCHHHHHH RHLLSHTAGLGYRFLEADGDGPYARASVSDGMDRSGLSLAENLRRIAGVPLQFAPGTSWG HHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCC YSLAIDVVGALIEAVDGRPLADAVAALVTTPLGMTDTAFVAPDATRFATPYVSTPGAPRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHCCCCCCCCCCCCC MADVDLVPVFDGTIGIRFEPARAFDVDAWPSGGAGMVGTARDCVTLLDTLRTGRDGWLGR CCCCEEEEEECCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC AWTDEMARAQPGAHDLRDAPGFGFGLGFSVLRDPVAAQSPESVGTWRGGGAYGHTWFVDR HHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEEC AAGLTVVALSNTLYEGLNGRIVTCVRDAVYGVGTGSAA CCCEEEEEEHHHHHHCCCCCEEEEEHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11472796; 11847270 [H]