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The map label for this gene is ygdL [H]

Identifier: 78067368

GI number: 78067368

Start: 3019437

End: 3020294

Strand: Reverse

Name: ygdL [H]

Synonym: Bcep18194_A5899

Alternate gene names: 78067368

Gene position: 3020294-3019437 (Counterclockwise)

Preceding gene: 78067372

Following gene: 78067365

Centisome position: 81.76

GC content: 69.23

Gene sequence:

>858_bases
ATGTCCGTCGCCGACGCTGCCCCGCCCAGTTCTTCTGATCTTACCCCGACCCCGGAAATCCAGCTTGACGTGGATCGAGC
GCGGCGTTTCGGCGGCGTCGCGCGCCTGTACGGCGCGCCGGCCGCTGCCGCGTTCGAGCGCGCGCACGTCGCGGTGATCG
GGATCGGCGGCGTCGGGTCGTGGGTGGCCGAGGCGCTCGCGCGCAACGCAGTCGGCACGCTGACGCTGATCGATCTCGAC
AACGTCGCCGAAAGCAATACGAACCGGCAGATCCATGCGCTCGACGGCAATTTCGGCAAGCCGAAGGTCGACGCGATGGC
CGAGCGGATCGCGCTGATCGATCCCGCGTGCCGCGTGAACCGGATCGAGGATTTCGTCGAGCCCGACAACTTCGATGCGC
TGCTCGGCGGCGGTTTCGACTATGTGATCGACGCGATCGACAGCGTGCGCACGAAGGTTGCGCTGATCGCGTGGTGCGTC
GCGAAACGCCAGCCGCTCGTCGTGGTCGGCGGCGCGGGCGGGCAACTCGACCCGACGCGCATCCGGATCGACGATCTCGC
GCTGACGATCCAGGATCCGCTGCTGTCGAAGGTGCGCGCGCAGTTGCGCAAGCAGCACGGCTTTCCGCGCGGGCCGAAAG
CGCGGTTCAAGGTCAGCGCCGTGTATTCGGACGAGCCGCTGATCTATCCGGAAGCGGCCGCGTGCGACCTCGAGGACGGC
GCCGAGCCGTCCGCGGCCGCGCACGTCGCGGGGCTCAACTGTGCGGGATTCGGTTCGAGCGTGTGCGTGACCGCGAGTTT
CGGCTTCGCGGCCGCCGCGCATGCGCTGCGCGCGATCGCGGCGCAAGCCGCCGGCTGA

Upstream 100 bases:

>100_bases
TTGTAGCCAACGCGCGAGAAACGTGCGTGCACAGTGGCGCGTGCGAGCGGGGAGTTCAGGCAAAATAGAGGGCTGCACGA
CTTACGTTTTCCTTGCTGCC

Downstream 100 bases:

>100_bases
GCCGCCGTGAATCGCGGTCGTTAAGGAATGCTGCGGCGCGTGACACGCGCCGTCGTATGGCATGCGGGGCGATCCCGCAG
CCGGGCCGTTGCGGCCCGGC

Product: UBA/THIF-type NAD/FAD binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSVADAAPPSSSDLTPTPEIQLDVDRARRFGGVARLYGAPAAAAFERAHVAVIGIGGVGSWVAEALARNAVGTLTLIDLD
NVAESNTNRQIHALDGNFGKPKVDAMAERIALIDPACRVNRIEDFVEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCV
AKRQPLVVVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAAACDLEDG
AEPSAAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAAQAAG

Sequences:

>Translated_285_residues
MSVADAAPPSSSDLTPTPEIQLDVDRARRFGGVARLYGAPAAAAFERAHVAVIGIGGVGSWVAEALARNAVGTLTLIDLD
NVAESNTNRQIHALDGNFGKPKVDAMAERIALIDPACRVNRIEDFVEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCV
AKRQPLVVVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAAACDLEDG
AEPSAAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAAQAAG
>Mature_284_residues
SVADAAPPSSSDLTPTPEIQLDVDRARRFGGVARLYGAPAAAAFERAHVAVIGIGGVGSWVAEALARNAVGTLTLIDLDN
VAESNTNRQIHALDGNFGKPKVDAMAERIALIDPACRVNRIEDFVEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCVA
KRQPLVVVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAAACDLEDGA
EPSAAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAAQAAG

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=261, Percent_Identity=52.1072796934866, Blast_Score=268, Evalue=2e-73,
Organism=Escherichia coli, GI1787048, Length=124, Percent_Identity=33.0645161290323, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082356, Length=131, Percent_Identity=32.0610687022901, Blast_Score=62, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321790, Length=201, Percent_Identity=27.8606965174129, Blast_Score=92, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6322825, Length=143, Percent_Identity=32.1678321678322, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24582879, Length=133, Percent_Identity=33.0827067669173, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 29706; Mature: 29575

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVADAAPPSSSDLTPTPEIQLDVDRARRFGGVARLYGAPAAAAFERAHVAVIGIGGVGS
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHHCCCHHHHHHCCEEEEEEECCHHH
WVAEALARNAVGTLTLIDLDNVAESNTNRQIHALDGNFGKPKVDAMAERIALIDPACRVN
HHHHHHHHCCCCEEEEEECCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHH
RIEDFVEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCVAKRQPLVVVGGAGGQLDPTR
HHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCE
IRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAAACDLEDG
EEEEHEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCC
AEPSAAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAAQAAG
CCCCHHHHCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVADAAPPSSSDLTPTPEIQLDVDRARRFGGVARLYGAPAAAAFERAHVAVIGIGGVGS
CCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHHCCCHHHHHHCCEEEEEEECCHHH
WVAEALARNAVGTLTLIDLDNVAESNTNRQIHALDGNFGKPKVDAMAERIALIDPACRVN
HHHHHHHHCCCCEEEEEECCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHH
RIEDFVEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCVAKRQPLVVVGGAGGQLDPTR
HHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCE
IRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAAACDLEDG
EEEEHEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCC
AEPSAAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAAQAAG
CCCCHHHHCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]