| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yjeE [H]
Identifier: 78067363
GI number: 78067363
Start: 3014299
End: 3014853
Strand: Direct
Name: yjeE [H]
Synonym: Bcep18194_A5894
Alternate gene names: 78067363
Gene position: 3014299-3014853 (Clockwise)
Preceding gene: 78067359
Following gene: 78067364
Centisome position: 81.6
GC content: 66.13
Gene sequence:
>555_bases ATGTCAGCCACGTCCAGCCACTCGCCTCATGCCGTCACGTTGCCCGCCCCGCTCGAGCAGCGCGTGATCGCGCTCGCCGA CGAAGCGGCGACCGAGGCCTTCGGCACCCGCTTCGCGCACGCACTCGACGCGGCACGCGTCGAACTCGCCCGCGCGCATG CGTTCGACGGGCTGCAGATCCAGCTGGTCGGTGATCTCGGCGCGGGCAAGACGTCCCTGGTACGCGCGATCCTGCGCGGC CTCGGCCACGCGGGGCGCGTGCGCAGCCCGACCTATACGCTCGTCGAGCCGTACGCGCTCGAACGCGACGATGGGGAACT CGAGGTCTATCACTTCGATCTGTATCGTTTCAACGATCCGGCCGAATGGTCCGACGCAGGCTTTCGCGAATATTTCAATT CCAGCGCGATCTGCCTCGTCGAATGGCCACAACAGGCGGGCACGCTGCTCGGCGTACCCGATCTGGTTTTCTCGCTCGAC GTGGATGGCGACGGCCGCGCCCTCACCGTCCGGGCGTACAGCGCTTCAGGAAAGGCATGTCTCGAAAGATGTTGA
Upstream 100 bases:
>100_bases GCATCGTCGAGCGCGCACGGTGCCGCGCCTTCGGCACAAGTCGAAGGCCTGTCGGATGCGGCGAGTTCCGGTAATCGGTT CATCGCACTATTTTACGAGA
Downstream 100 bases:
>100_bases TCAAACCGTTCCGCTCGATCGAATCGGCGGCCACCGCGACGCACAACTGGCGGCGCCGCCAGATCCTGTGCGCGGGCGCG TCGACGCTGGTGCTCGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSATSSHSPHAVTLPAPLEQRVIALADEAATEAFGTRFAHALDAARVELARAHAFDGLQIQLVGDLGAGKTSLVRAILRG LGHAGRVRSPTYTLVEPYALERDDGELEVYHFDLYRFNDPAEWSDAGFREYFNSSAICLVEWPQQAGTLLGVPDLVFSLD VDGDGRALTVRAYSASGKACLERC
Sequences:
>Translated_184_residues MSATSSHSPHAVTLPAPLEQRVIALADEAATEAFGTRFAHALDAARVELARAHAFDGLQIQLVGDLGAGKTSLVRAILRG LGHAGRVRSPTYTLVEPYALERDDGELEVYHFDLYRFNDPAEWSDAGFREYFNSSAICLVEWPQQAGTLLGVPDLVFSLD VDGDGRALTVRAYSASGKACLERC >Mature_183_residues SATSSHSPHAVTLPAPLEQRVIALADEAATEAFGTRFAHALDAARVELARAHAFDGLQIQLVGDLGAGKTSLVRAILRGL GHAGRVRSPTYTLVEPYALERDDGELEVYHFDLYRFNDPAEWSDAGFREYFNSSAICLVEWPQQAGTLLGVPDLVFSLDV DGDGRALTVRAYSASGKACLERC
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=166, Percent_Identity=48.7951807228916, Blast_Score=144, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 19905; Mature: 19774
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATSSHSPHAVTLPAPLEQRVIALADEAATEAFGTRFAHALDAARVELARAHAFDGLQI CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE QLVGDLGAGKTSLVRAILRGLGHAGRVRSPTYTLVEPYALERDDGELEVYHFDLYRFNDP EEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCEEEEEEEEEEECCC AEWSDAGFREYFNSSAICLVEWPQQAGTLLGVPDLVFSLDVDGDGRALTVRAYSASGKAC CCCCCCHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEEECCCCCEEEEEEECCCCHHH LERC HHCC >Mature Secondary Structure SATSSHSPHAVTLPAPLEQRVIALADEAATEAFGTRFAHALDAARVELARAHAFDGLQI CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE QLVGDLGAGKTSLVRAILRGLGHAGRVRSPTYTLVEPYALERDDGELEVYHFDLYRFNDP EEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCEEEEEEEEEEECCC AEWSDAGFREYFNSSAICLVEWPQQAGTLLGVPDLVFSLDVDGDGRALTVRAYSASGKAC CCCCCCHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEEECCCCCEEEEEEECCCCHHH LERC HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]