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The map label for this gene is 78067308

Identifier: 78067308

GI number: 78067308

Start: 2952547

End: 2953740

Strand: Reverse

Name: 78067308

Synonym: Bcep18194_A5839

Alternate gene names: NA

Gene position: 2953740-2952547 (Counterclockwise)

Preceding gene: 78067309

Following gene: 78067307

Centisome position: 79.96

GC content: 62.23

Gene sequence:

>1194_bases
TTGTTGAATTCCCTGCTCGATTTTCTTTCCCACGGGCTCCTGCATTTTTCGTGGTGGCAGGTCGCGCTGTTCGCGCTCGC
CGTCACGCACGTCACGATCATCGGCGTGACGGTCTACCTGCACCGCTGCCAGGCGCACCGCGCGCTTGAGCTGCATCCGA
TCGCGAGCCACTTCTTCCGCCTCTGGCTGTGGATGACGACCGGCATGCTGACCGGCCAGTGGGCCGCGATTCACCGCAAG
CACCACGCGAAGTGCGAGACCGAGGAAGATCCGCACAGCCCGCAGACGCGCGGCATCTGGAAGGTGTTCCTCGAAGGCGC
CGAGCTGTATCGCGCGGAAGCGAAGAACGAAGAGACGATGCGCAAGTTCGGCCATGGCACGCCGAGCGACTGGGTCGAAC
GCAATGTCTATTCGAAGTACCCGATTCTCGGCATCAGCCTGATGATGGTGATCGACGTCGCGCTGTTCGGCGTGATCGGC
CTGACCGTGTGGGCCGTGCAGATGGTCTGGATTCCGTTCTGGGCGGCTGGCGTCGTCAACGGCTTCGGTCACTTCTGGGG
CTATCGCAACTTCAACTCGACCGACGCGAGCACGAACCTGTTCCCGTGGGGCATCGTGATCGGCGGCGAAGAGCTGCACA
ACAACCACCACACGTTCGCGACGTCGGCGAAGCTGTCGAACAAGTGGTACGAGTTCGACATCGGCTGGATGTACATCCGC
ATCATGTCGGCATTCGGTCTCGCGAAGGTGAAGAAGGTCGCGCCGACGCCGCGCCTGAACAAGCCGAAGACGGTGCTCGA
CCAGGAAACGCTGCAGGCCGTGCTGTCGAACCGCTACGAAGTGATGGCGCGCTACGGCAAGGCCGTGAAGCGTGCGTACC
GCCAGGAGCTCGCGCACCTGAAGGAAATCGGCGGCGAGAAGTACCAGATGATGCGCGGCGCACGCAAGTGGTTCCACAAG
GATGCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGTTGCCGGAAATCTTCGCGAACAGCCAGAAGCTGCAAACCTACTT
CCAGTTGCGCCAGGATCTCGCCGCGATCTGGGATCGTTCGACCGCATCGCGCGAACAGCTTCTCGCGCAATTGCAGGATT
GGTGCCATCGCGCAGAACAAAGCGGCATCAAGGCGCTGCAGGAATTCGCGACGCGCCTGCGCCGCTACGCCTGA

Upstream 100 bases:

>100_bases
CTTGGAACGGTTGAAGTAAAATTCTGGTCTACACGCGGTATGCTTTCATTTTTCTGACGCTTGGCGCGGGCCGGCGTCGC
TCTCATCACAGGTAACTGCC

Downstream 100 bases:

>100_bases
TTCGAAATCGATTAGAATCTAAGGACGTCAAAAACCCCGCGTTGGCGGGGTTTTTTATTTGGTTCGCCGGTTTTCGAAGG
GTGATCGGCAGGGCTGGATT

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Delta-9 Acyl-Lipid Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Domain Protein; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family; Fatty Acid Desaturase Family Proteiin

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MLNSLLDFLSHGLLHFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFRLWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETMRKFGHGTPSDWVERNVYSKYPILGISLMMVIDVALFGVIG
LTVWAVQMVWIPFWAAGVVNGFGHFWGYRNFNSTDASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHLKEIGGEKYQMMRGARKWFHK
DADGLDEPQKKLLPEIFANSQKLQTYFQLRQDLAAIWDRSTASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA

Sequences:

>Translated_397_residues
MLNSLLDFLSHGLLHFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFRLWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETMRKFGHGTPSDWVERNVYSKYPILGISLMMVIDVALFGVIG
LTVWAVQMVWIPFWAAGVVNGFGHFWGYRNFNSTDASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHLKEIGGEKYQMMRGARKWFHK
DADGLDEPQKKLLPEIFANSQKLQTYFQLRQDLAAIWDRSTASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA
>Mature_397_residues
MLNSLLDFLSHGLLHFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFRLWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETMRKFGHGTPSDWVERNVYSKYPILGISLMMVIDVALFGVIG
LTVWAVQMVWIPFWAAGVVNGFGHFWGYRNFNSTDASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHLKEIGGEKYQMMRGARKWFHK
DADGLDEPQKKLLPEIFANSQKLQTYFQLRQDLAAIWDRSTASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321383, Length=246, Percent_Identity=26.0162601626016, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45928; Mature: 45928

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSLLDFLSHGLLHFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LWLWMTTGMLTGQWAAIHRKHHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETM
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
RKFGHGTPSDWVERNVYSKYPILGISLMMVIDVALFGVIGLTVWAVQMVWIPFWAAGVVN
HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFGHFWGYRNFNSTDASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
HHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHHHHCCCCEEECHHHHHHH
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEIGGEKYQMMRGARKWFHKDADGLDEPQKKLLPEIFANSQKLQTYFQLRQDLAAIWDRS
HHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
TASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNSLLDFLSHGLLHFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LWLWMTTGMLTGQWAAIHRKHHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETM
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
RKFGHGTPSDWVERNVYSKYPILGISLMMVIDVALFGVIGLTVWAVQMVWIPFWAAGVVN
HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFGHFWGYRNFNSTDASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
HHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHHHHCCCCEEECHHHHHHH
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEIGGEKYQMMRGARKWFHKDADGLDEPQKKLLPEIFANSQKLQTYFQLRQDLAAIWDRS
HHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
TASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA