| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067226
Identifier: 78067226
GI number: 78067226
Start: 2866759
End: 2867295
Strand: Direct
Name: 78067226
Synonym: Bcep18194_A5757
Alternate gene names: NA
Gene position: 2866759-2867295 (Clockwise)
Preceding gene: 78067224
Following gene: 78067227
Centisome position: 77.6
GC content: 67.6
Gene sequence:
>537_bases ATGAACGCTACCCGACGTCGTGTCCTTTCCGCTGCGCTCGCGACCGCCTTCGCATTCGCACCGGCGCTGCAACCCGTTAC CGTCGCCGCCACTTACTCGAACGGCAACGCCACCGCCCAGTTCAACGTCACGCTGACGATCCAGGCGAACTGCACGATCG CCGCCAACCCGCTCGCATTCGGCACGACCGGCGTGCTCGCGTCGACGATCAGCCAGCAGACCACCCTGTCCGTCACCTGC ACGAACTCGACGCCGTACAACGTCGGGCTCGATGCGGGCGCCGTCACGGGCTCGACGGTCGCCAGCCGGCTGATGGCCGG CACCGCAAGCGGCAACACGAGCACGACGGTCGGCTACCAGATCTACCAGGATTCGGGGCACGCCACGGTCTGGGGCAACA CACAGGGAACGGACACGGTCGGCGGCACCGGGACCGGTTCCGCGCAGTCGCTGAACGTGTACGGCCAGGTGCCGGCGCAG GCGACACCGAAGCCCGACACCTATCAGGCGACCGTCACCGCCACCGTCTACTTCTGA
Upstream 100 bases:
>100_bases TTCCGTCAACGACAGCGCAGTTCCGTCGGCACGGCAGGCACAACGCGGGAGGCCACCCGCGAGCCGGGCGACACCCCTTG AACGGCTGGAGATAACCACA
Downstream 100 bases:
>100_bases CGCCCCGTGGCGTTCCTTCCGCGCGCGCTCGCCGCGCTGTGGGCCGCGTCGGCGGCGGCCGTATCCGCGGCCACGCTGCA GATCACGCCCGTGACGATCG
Product: uncharacterized secreted protein-like
Products: NA
Alternate protein names: Signal Peptide Protein; Spore Coat U Domain Protein; Spore Coat Protein U Domain-Containing; Spore Coat Protein U; Lipoprotein; Spore Coat Protein U Domain Protein; Protein U; Spore Coat Protein U Family Protein; Secreted Protein-Like
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNATRRRVLSAALATAFAFAPALQPVTVAATYSNGNATAQFNVTLTIQANCTIAANPLAFGTTGVLASTISQQTTLSVTC TNSTPYNVGLDAGAVTGSTVASRLMAGTASGNTSTTVGYQIYQDSGHATVWGNTQGTDTVGGTGTGSAQSLNVYGQVPAQ ATPKPDTYQATVTATVYF
Sequences:
>Translated_178_residues MNATRRRVLSAALATAFAFAPALQPVTVAATYSNGNATAQFNVTLTIQANCTIAANPLAFGTTGVLASTISQQTTLSVTC TNSTPYNVGLDAGAVTGSTVASRLMAGTASGNTSTTVGYQIYQDSGHATVWGNTQGTDTVGGTGTGSAQSLNVYGQVPAQ ATPKPDTYQATVTATVYF >Mature_178_residues MNATRRRVLSAALATAFAFAPALQPVTVAATYSNGNATAQFNVTLTIQANCTIAANPLAFGTTGVLASTISQQTTLSVTC TNSTPYNVGLDAGAVTGSTVASRLMAGTASGNTSTTVGYQIYQDSGHATVWGNTQGTDTVGGTGTGSAQSLNVYGQVPAQ ATPKPDTYQATVTATVYF
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17973; Mature: 17973
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATRRRVLSAALATAFAFAPALQPVTVAATYSNGNATAQFNVTLTIQANCTIAANPLAF CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEEEEEEECEEEEECCCCC GTTGVLASTISQQTTLSVTCTNSTPYNVGLDAGAVTGSTVASRLMAGTASGNTSTTVGYQ CCHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEE IYQDSGHATVWGNTQGTDTVGGTGTGSAQSLNVYGQVPAQATPKPDTYQATVTATVYF EEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MNATRRRVLSAALATAFAFAPALQPVTVAATYSNGNATAQFNVTLTIQANCTIAANPLAF CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEEEEEEECEEEEECCCCC GTTGVLASTISQQTTLSVTCTNSTPYNVGLDAGAVTGSTVASRLMAGTASGNTSTTVGYQ CCHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEE IYQDSGHATVWGNTQGTDTVGGTGTGSAQSLNVYGQVPAQATPKPDTYQATVTATVYF EEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA