| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is otsA [H]
Identifier: 78067188
GI number: 78067188
Start: 2824795
End: 2826216
Strand: Reverse
Name: otsA [H]
Synonym: Bcep18194_A5719
Alternate gene names: 78067188
Gene position: 2826216-2824795 (Counterclockwise)
Preceding gene: 78067189
Following gene: 78067187
Centisome position: 76.51
GC content: 67.37
Gene sequence:
>1422_bases ATGAGCAGATTGATCGTGGTATCGAACCGTGTCGCCGCCGGCGAGGACACGCGCCCGAGCGCGGGTGGCCTGGCGGTCGG CGTGATGGACGCGCTGAAGGAAACGGGCGGCGTCTGGTTCGGCTGGAACGGCGAGATCGTCGACGCACCCGATACCGAAC CCGCGATCCAGCAGGACGGCAACGTCACCTATGCGACGGTCGGGCTGAACCGGCGCGACTACGATCAGTACTACCGCGGC TTCTCGAACGCGACGCTGTGGCCGGTGTTCCATTACCGCGGCGATCTCGCGCGCTTCGACCGTCAGGAGTACGCGGGCTA TCTGCGCGTGAACGCGATGCTCGCCAAGCAGCTTGCCGCCCTGCTGCGCCCCGACGACCTGATCTGGGTACACGACTATC ACCTGTTGCCGTTCGCGCATTACCTGCGCGAGCTCGGCGTGAAGAACCCGATCGGCTTCTTCCTGCACATTCCGTTTCCG TCGCCCGACATGCTGCGTCTCGTGCCGCCGCACGAGGAACTCGTGAAGTTCATGTGCGCGTACGACGTCGCGGGCTTCCA GACCGAGACCGACAAGCAGGCGTTCACCGACTACATCGAACGGCGCGGGATCGGTGCGGCGAGCGACGACGGAATGCTGC ACGCGCATGGCCGCGTCGTGAAGGTCGCCGCCTATCCGATCGGTGTGCATCCCGACGCGATCGCGCAGGCGGCCGTCCAG TACAGCGCGCGCAAGCCGGTGAAGATGCTGCGCGAGGCGCTCGACGGCCGCAAGCTGGTGATGAGCGTCGACCGCCTCGA CTACTCGAAGGGGCTCGTCGAGCGCTTCCAGTCGTTCGAGCGGATGCTCGCGAACGCGCCGGGCTGGCAGGGGCGCGTGT CGCTCCTGCAGATCGCGCCGCCGACGCGTTCCGACGTGAAGACCTATCAGGACATTCGCGAAACGCTCGAAGGCGAGGCC GGCCGCATCAACGGCCGCTTCTCGCAGCTGGACTGGACCCCGATCCAGTACCTGAACCGCAAGTACGAGCGCAACCTGCT GATGGCGTTCTTCCGGATGTCGCAGGTCGGCTACGTGACGCCGCTGCGCGACGGGATGAATCTCGTCGCGAAGGAGTACG TCGCGTCGCAGGATCCGGCCGATCCGGGCGTGCTCGTGCTGTCGGAGTTCGCGGGTGCGGCAGCCGAGCTGACCGGCGCG CTCCTCGTCAATCCGTATGACCTGTCGCAGATGGCCGAGGCGCTCGAGCGCGCGCTGTCGATGCCGCTCGCGGAGCGGCA GGCGCGCCACGAGGAAAACCTCGCGCGGTTGCGTGTGAACGACCTGTCGGTCTGGCGCGATACGTTCGTCGCCGACTTGC GCAGTGTCGCGGCTGCCGCGTCGGTCACGCGGCGCGCGGGCCGGCGGGTCGCGCATGCGTGA
Upstream 100 bases:
>100_bases ATTGCTCACGTCTGAATCGCCGCACGGCCGCCTTCGGGTCGCCGTGTCCGCCTTGGCGCGCGCCGCGCGCCAGCCAATCG AATCGAGGAGGGGAAGCCGC
Downstream 100 bases:
>100_bases GGTCGTGGAAGGGCCCGGCGTCGCCGACGACGACGCCTCCCGCCGCTTCTTCGTCGTGACCGGTGGTCCGGGCTCGGGCA AGAGCACGTTGCTCGACGCG
Product: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSRLIVVSNRVAAGEDTRPSAGGLAVGVMDALKETGGVWFGWNGEIVDAPDTEPAIQQDGNVTYATVGLNRRDYDQYYRG FSNATLWPVFHYRGDLARFDRQEYAGYLRVNAMLAKQLAALLRPDDLIWVHDYHLLPFAHYLRELGVKNPIGFFLHIPFP SPDMLRLVPPHEELVKFMCAYDVAGFQTETDKQAFTDYIERRGIGAASDDGMLHAHGRVVKVAAYPIGVHPDAIAQAAVQ YSARKPVKMLREALDGRKLVMSVDRLDYSKGLVERFQSFERMLANAPGWQGRVSLLQIAPPTRSDVKTYQDIRETLEGEA GRINGRFSQLDWTPIQYLNRKYERNLLMAFFRMSQVGYVTPLRDGMNLVAKEYVASQDPADPGVLVLSEFAGAAAELTGA LLVNPYDLSQMAEALERALSMPLAERQARHEENLARLRVNDLSVWRDTFVADLRSVAAAASVTRRAGRRVAHA
Sequences:
>Translated_473_residues MSRLIVVSNRVAAGEDTRPSAGGLAVGVMDALKETGGVWFGWNGEIVDAPDTEPAIQQDGNVTYATVGLNRRDYDQYYRG FSNATLWPVFHYRGDLARFDRQEYAGYLRVNAMLAKQLAALLRPDDLIWVHDYHLLPFAHYLRELGVKNPIGFFLHIPFP SPDMLRLVPPHEELVKFMCAYDVAGFQTETDKQAFTDYIERRGIGAASDDGMLHAHGRVVKVAAYPIGVHPDAIAQAAVQ YSARKPVKMLREALDGRKLVMSVDRLDYSKGLVERFQSFERMLANAPGWQGRVSLLQIAPPTRSDVKTYQDIRETLEGEA GRINGRFSQLDWTPIQYLNRKYERNLLMAFFRMSQVGYVTPLRDGMNLVAKEYVASQDPADPGVLVLSEFAGAAAELTGA LLVNPYDLSQMAEALERALSMPLAERQARHEENLARLRVNDLSVWRDTFVADLRSVAAAASVTRRAGRRVAHA >Mature_472_residues SRLIVVSNRVAAGEDTRPSAGGLAVGVMDALKETGGVWFGWNGEIVDAPDTEPAIQQDGNVTYATVGLNRRDYDQYYRGF SNATLWPVFHYRGDLARFDRQEYAGYLRVNAMLAKQLAALLRPDDLIWVHDYHLLPFAHYLRELGVKNPIGFFLHIPFPS PDMLRLVPPHEELVKFMCAYDVAGFQTETDKQAFTDYIERRGIGAASDDGMLHAHGRVVKVAAYPIGVHPDAIAQAAVQY SARKPVKMLREALDGRKLVMSVDRLDYSKGLVERFQSFERMLANAPGWQGRVSLLQIAPPTRSDVKTYQDIRETLEGEAG RINGRFSQLDWTPIQYLNRKYERNLLMAFFRMSQVGYVTPLRDGMNLVAKEYVASQDPADPGVLVLSEFAGAAAELTGAL LVNPYDLSQMAEALERALSMPLAERQARHEENLARLRVNDLSVWRDTFVADLRSVAAAASVTRRAGRRVAHA
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=467, Percent_Identity=51.8201284796574, Blast_Score=483, Evalue=1e-137, Organism=Caenorhabditis elegans, GI115533560, Length=420, Percent_Identity=29.7619047619048, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI115533558, Length=420, Percent_Identity=29.7619047619048, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71987012, Length=437, Percent_Identity=29.0617848970252, Blast_Score=158, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6319602, Length=468, Percent_Identity=33.974358974359, Blast_Score=289, Evalue=7e-79, Organism=Saccharomyces cerevisiae, GI6320279, Length=402, Percent_Identity=27.1144278606965, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323537, Length=383, Percent_Identity=27.154046997389, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6323917, Length=373, Percent_Identity=27.0777479892761, Blast_Score=165, Evalue=1e-41, Organism=Drosophila melanogaster, GI19920676, Length=498, Percent_Identity=36.9477911646586, Blast_Score=287, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 52930; Mature: 52799
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIVVSNRVAAGEDTRPSAGGLAVGVMDALKETGGVWFGWNGEIVDAPDTEPAIQQDG CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEECCCCCCCCHHCCC NVTYATVGLNRRDYDQYYRGFSNATLWPVFHYRGDLARFDRQEYAGYLRVNAMLAKQLAA CEEEEEECCCCCCHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH LLRPDDLIWVHDYHLLPFAHYLRELGVKNPIGFFLHIPFPSPDMLRLVPPHEELVKFMCA HHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCHHHHHHHHHH YDVAGFQTETDKQAFTDYIERRGIGAASDDGMLHAHGRVVKVAAYPIGVHPDAIAQAAVQ HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEECCCCHHHHHHHHHH YSARKPVKMLREALDGRKLVMSVDRLDYSKGLVERFQSFERMLANAPGWQGRVSLLQIAP HHCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC PTRSDVKTYQDIRETLEGEAGRINGRFSQLDWTPIQYLNRKYERNLLMAFFRMSQVGYVT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PLRDGMNLVAKEYVASQDPADPGVLVLSEFAGAAAELTGALLVNPYDLSQMAEALERALS CCHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCHHHHHCCEEEECCCCHHHHHHHHHHHHC MPLAERQARHEENLARLRVNDLSVWRDTFVADLRSVAAAASVTRRAGRRVAHA CCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRLIVVSNRVAAGEDTRPSAGGLAVGVMDALKETGGVWFGWNGEIVDAPDTEPAIQQDG CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEECCCCCCCCHHCCC NVTYATVGLNRRDYDQYYRGFSNATLWPVFHYRGDLARFDRQEYAGYLRVNAMLAKQLAA CEEEEEECCCCCCHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH LLRPDDLIWVHDYHLLPFAHYLRELGVKNPIGFFLHIPFPSPDMLRLVPPHEELVKFMCA HHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCHHHHHHHHHH YDVAGFQTETDKQAFTDYIERRGIGAASDDGMLHAHGRVVKVAAYPIGVHPDAIAQAAVQ HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEECCCCHHHHHHHHHH YSARKPVKMLREALDGRKLVMSVDRLDYSKGLVERFQSFERMLANAPGWQGRVSLLQIAP HHCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC PTRSDVKTYQDIRETLEGEAGRINGRFSQLDWTPIQYLNRKYERNLLMAFFRMSQVGYVT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PLRDGMNLVAKEYVASQDPADPGVLVLSEFAGAAAELTGALLVNPYDLSQMAEALERALS CCHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCHHHHHCCEEEECCCCHHHHHHHHHHHHC MPLAERQARHEENLARLRVNDLSVWRDTFVADLRSVAAAASVTRRAGRRVAHA CCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA