Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is ybbP [H]

Identifier: 78067076

GI number: 78067076

Start: 2704299

End: 2706914

Strand: Reverse

Name: ybbP [H]

Synonym: Bcep18194_A5607

Alternate gene names: 78067076

Gene position: 2706914-2704299 (Counterclockwise)

Preceding gene: 78067077

Following gene: 78067075

Centisome position: 73.28

GC content: 71.9

Gene sequence:

>2616_bases
TTGAAGGGGCGGCAACACGCGGCGCAGCCGCCGGCCGGGCAACCCGGCCATGAGGTGAGCGCGCATGCCGGCCGCTTCGG
CCTGCGCGACCTGATCCGCCAGGCCGCCCGCATGACCGCGCGCGACTGGCGCGCGGGCGAGTTGACGCTGCTCGTCCTTG
CCTTGGTGCTCGCGGTCGCGGCGCTGACGAGCGTCGGCTTCCTTGCCGACCGGCTGCGCCAGGGGCTCGAGCGCGACGCG
CGCCAGATGCTCGGCGCCGATTTCGTCGTGCGGGCCGATCGCCCCGTCGATCCGTCGTTCGACCAGCAGGCCCGCGCGCT
CGGGCTGCGTACCGCGACGACCGCCATCTTCCCGAGCATGATCGCGTCCGCCACGGGCGGGCAGGCGACCGACGCGGCGC
CCTCTCGCCTCGCGGCCGTGAAGGCCGTGTCGCCCGGCTATCCGTTGCGCGGCGCGGTCGAGATCCTGCCGGCCGGCGCT
GCCGTCGCGCAGAAGGCCGCCGAGATTCCCGCGCCCGGCACCGTATGGGCCGATCCGGCGCTGCTCGATGCGCTGCACCT
GAAAGCGGGCGATACGGTGCGTGTCGGACTGCGCACGTTCAAGGTCGCCGCATCGATCTCCCGCGAACTCGATCGCGGCT
TTTCCTTCGTCAATTTTTCGCCGCGGTTGATGATGCGCGCCGATGAACTCGCCGCAACGGGGCTCACGGGCTACGGCAGC
CGTGTTACGTACCGGCTGCTGGTCGCCGGCGACCAGCAGGCTGTCACACGCTTCGAAGCGTATGCGCACGCACGTGTCGA
CGGCGGGAAGCTGCGCGGCGTCGGTCTGGAATCGTTGCAGGAAGGCCAGCCGCAGGTGCGGCAGACGCTGGATCGAGCGC
GCCACTTCCTGACGCTCGTCGCACTGCTTACCGCGCTGCTCGCGGCGGTCGCGATTGCGATGGCCGCGCAGCGCTACATG
CGGCGCCACCTCGACGGCTGTGCGACGATGCGCTGCCTCGGCGTGAGCCGCCGCACGCTCGGCGCGCTGTTTGCGCTCGA
ATTCGCCGGGATCGGGATCGTGTCCGGTGCCGCAGGCGCGGTGCTCGGCTACGGCGGCCACTGGGCGTTGCTGGCCGCGC
TCGGTGGCCTGATCGACGTGGTGCTGCCGCCGCCCACGCTGTGGCCGGCGCTGATTGGCGTGGGCGCTGCGCTCGTGCTG
CTGCTCGGCTTCGCGCTGCCGCCGCTCGTGCCGCTCACGCGCGTGCCGCCGGTGCGCGTGCTGCGGCGCGAGTGGGGCGA
CGCGTCGCGCACCGCATGGGCCGCGTACGCGATCGGCGTCGTGCTGTTCGCGGCGCTGCTGATCGTGGCGGCCGGCAACC
TGAAACTCGGGCTGATCGTCGCGGGCGGTTTCGCCGGCGCGCTGGTCGGTTTCGCGCTGATCGCGCGGCTCGTGCTGTTC
GCCGCCGCGCGCGCGGTGCGCAATGCGCGCGTGGCTGCGGGCGTCGGCTGGCGCTACGCACTCGCGTCGCTGCACCGGCG
CGGCACGGCCAGCGCGCTGCAGATCACCGCACTCGCGCTTGGCCTGATGTGCCTGCTGCTGATCGCGATCACGCGCAACG
ACCTCGTCGCGGGCTGGCGTCAGTCGACGCCGCCCGATGCGCCGAATCAGTTCCTGATCGACATCCAGCCCGACCAGCGC
GCTGACGTCGCGGCCTACCTGACCGCGCACGGCGTGCGCGACGCGGAGCCCGCGCCGATGGTGCGCGGCCGCCTCGTCGC
GATCAACGGCAAGCCGGTGAATCCGGACGCGTACCCGTCCGAGGAGGCGCGCCGGCTCGTCGACCGCGAGTTCAACCTGT
CCTATACGACCGAGCTGCCGTCCGACAACCGGATCGTCGAAGGCGACTGGTTCGGCACCGCGGCCACGCCGCAGATCTCG
ATCGAGGCCGGCCTCGCGAAGACGCTGAACGTGAAGCCGGGCGACATGCTGCGCTTCGACGTGACGGGGCTGACGGTCGA
CGCGCCGATCACGAGCGTGCGCAAGCTCGACTGGGGTTCGTTCCGCGTCAATTTCTTCGTGCTGATGCCGCCGCCGGTGC
TGAAGGATTTCCCGGCCGTGTACCTGACGAGCTTCCATTTGCCCGCATCGGATGCCGCGCTGCTCGATCCGCTGATCGCG
CGCTACCCGAACCTGACCGCGATCGACGTCGCGCCGATTCTCGCGCAGCTGCAGCGGATGATGCTGCAGGTGGTCGGGGC
GGTGCAGTTCCTGTTTGCGTTCACGCTCGCGGCCGGCGTGCTCGTGCTGTACACGGCGCTTGCCGGCACGCGCGACGAGC
GGGTGCGCGAGGCCGCGCTGCTGCGCGCGCTCGGCGCGTCGCGCGCGCAGGTCAACGCGGTGCAGCGCGCGGAATTCGTC
GTGGTCGGCGCGCTGGCTGGTGCGCTGGCATCGGCGGGCGCGATCGCGGTCGGCTGGGTGCTCGCGTCGCGTGTATTCGA
CTTCCAGCTCGCCGTCGATCCGTGGCTGGTGCCGGCCGGCATCGCGGCCGGCATCGTGTGCGCCGGTGCGGCCGGCTGGC
TGAGCCTGCATAATGTGCTGCGGCGCCCCGCGCTGCAGTCGCTGCGCGACGCATGA

Upstream 100 bases:

>100_bases
CGTGGGCGCTCCCGCGCCTGTGGCGCGGTGTCTCGGGCGGCTTTCGCGGCATGGCGAACCACATGGTGTCGCGGCTCAAC
TCGATCGGGGGGAAGCGCGA

Downstream 100 bases:

>100_bases
GCGTCGCCGGCAACCCTGAAGCCCCTGTTTTCCGACTATCCGTATGACCGATGTGAATGACGATGCGCCGTCGCAACCCA
CGGCGTTCGAGCTCGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 871; Mature: 871

Protein sequence:

>871_residues
MKGRQHAAQPPAGQPGHEVSAHAGRFGLRDLIRQAARMTARDWRAGELTLLVLALVLAVAALTSVGFLADRLRQGLERDA
RQMLGADFVVRADRPVDPSFDQQARALGLRTATTAIFPSMIASATGGQATDAAPSRLAAVKAVSPGYPLRGAVEILPAGA
AVAQKAAEIPAPGTVWADPALLDALHLKAGDTVRVGLRTFKVAASISRELDRGFSFVNFSPRLMMRADELAATGLTGYGS
RVTYRLLVAGDQQAVTRFEAYAHARVDGGKLRGVGLESLQEGQPQVRQTLDRARHFLTLVALLTALLAAVAIAMAAQRYM
RRHLDGCATMRCLGVSRRTLGALFALEFAGIGIVSGAAGAVLGYGGHWALLAALGGLIDVVLPPPTLWPALIGVGAALVL
LLGFALPPLVPLTRVPPVRVLRREWGDASRTAWAAYAIGVVLFAALLIVAAGNLKLGLIVAGGFAGALVGFALIARLVLF
AAARAVRNARVAAGVGWRYALASLHRRGTASALQITALALGLMCLLLIAITRNDLVAGWRQSTPPDAPNQFLIDIQPDQR
ADVAAYLTAHGVRDAEPAPMVRGRLVAINGKPVNPDAYPSEEARRLVDREFNLSYTTELPSDNRIVEGDWFGTAATPQIS
IEAGLAKTLNVKPGDMLRFDVTGLTVDAPITSVRKLDWGSFRVNFFVLMPPPVLKDFPAVYLTSFHLPASDAALLDPLIA
RYPNLTAIDVAPILAQLQRMMLQVVGAVQFLFAFTLAAGVLVLYTALAGTRDERVREAALLRALGASRAQVNAVQRAEFV
VVGALAGALASAGAIAVGWVLASRVFDFQLAVDPWLVPAGIAAGIVCAGAAGWLSLHNVLRRPALQSLRDA

Sequences:

>Translated_871_residues
MKGRQHAAQPPAGQPGHEVSAHAGRFGLRDLIRQAARMTARDWRAGELTLLVLALVLAVAALTSVGFLADRLRQGLERDA
RQMLGADFVVRADRPVDPSFDQQARALGLRTATTAIFPSMIASATGGQATDAAPSRLAAVKAVSPGYPLRGAVEILPAGA
AVAQKAAEIPAPGTVWADPALLDALHLKAGDTVRVGLRTFKVAASISRELDRGFSFVNFSPRLMMRADELAATGLTGYGS
RVTYRLLVAGDQQAVTRFEAYAHARVDGGKLRGVGLESLQEGQPQVRQTLDRARHFLTLVALLTALLAAVAIAMAAQRYM
RRHLDGCATMRCLGVSRRTLGALFALEFAGIGIVSGAAGAVLGYGGHWALLAALGGLIDVVLPPPTLWPALIGVGAALVL
LLGFALPPLVPLTRVPPVRVLRREWGDASRTAWAAYAIGVVLFAALLIVAAGNLKLGLIVAGGFAGALVGFALIARLVLF
AAARAVRNARVAAGVGWRYALASLHRRGTASALQITALALGLMCLLLIAITRNDLVAGWRQSTPPDAPNQFLIDIQPDQR
ADVAAYLTAHGVRDAEPAPMVRGRLVAINGKPVNPDAYPSEEARRLVDREFNLSYTTELPSDNRIVEGDWFGTAATPQIS
IEAGLAKTLNVKPGDMLRFDVTGLTVDAPITSVRKLDWGSFRVNFFVLMPPPVLKDFPAVYLTSFHLPASDAALLDPLIA
RYPNLTAIDVAPILAQLQRMMLQVVGAVQFLFAFTLAAGVLVLYTALAGTRDERVREAALLRALGASRAQVNAVQRAEFV
VVGALAGALASAGAIAVGWVLASRVFDFQLAVDPWLVPAGIAAGIVCAGAAGWLSLHNVLRRPALQSLRDA
>Mature_871_residues
MKGRQHAAQPPAGQPGHEVSAHAGRFGLRDLIRQAARMTARDWRAGELTLLVLALVLAVAALTSVGFLADRLRQGLERDA
RQMLGADFVVRADRPVDPSFDQQARALGLRTATTAIFPSMIASATGGQATDAAPSRLAAVKAVSPGYPLRGAVEILPAGA
AVAQKAAEIPAPGTVWADPALLDALHLKAGDTVRVGLRTFKVAASISRELDRGFSFVNFSPRLMMRADELAATGLTGYGS
RVTYRLLVAGDQQAVTRFEAYAHARVDGGKLRGVGLESLQEGQPQVRQTLDRARHFLTLVALLTALLAAVAIAMAAQRYM
RRHLDGCATMRCLGVSRRTLGALFALEFAGIGIVSGAAGAVLGYGGHWALLAALGGLIDVVLPPPTLWPALIGVGAALVL
LLGFALPPLVPLTRVPPVRVLRREWGDASRTAWAAYAIGVVLFAALLIVAAGNLKLGLIVAGGFAGALVGFALIARLVLF
AAARAVRNARVAAGVGWRYALASLHRRGTASALQITALALGLMCLLLIAITRNDLVAGWRQSTPPDAPNQFLIDIQPDQR
ADVAAYLTAHGVRDAEPAPMVRGRLVAINGKPVNPDAYPSEEARRLVDREFNLSYTTELPSDNRIVEGDWFGTAATPQIS
IEAGLAKTLNVKPGDMLRFDVTGLTVDAPITSVRKLDWGSFRVNFFVLMPPPVLKDFPAVYLTSFHLPASDAALLDPLIA
RYPNLTAIDVAPILAQLQRMMLQVVGAVQFLFAFTLAAGVLVLYTALAGTRDERVREAALLRALGASRAQVNAVQRAEFV
VVGALAGALASAGAIAVGWVLASRVFDFQLAVDPWLVPAGIAAGIVCAGAAGWLSLHNVLRRPALQSLRDA

Specific function: Unknown

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1786704, Length=825, Percent_Identity=31.1515151515152, Blast_Score=321, Evalue=2e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 92039; Mature: 92039

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRQHAAQPPAGQPGHEVSAHAGRFGLRDLIRQAARMTARDWRAGELTLLVLALVLAVA
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ALTSVGFLADRLRQGLERDARQMLGADFVVRADRPVDPSFDQQARALGLRTATTAIFPSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IASATGGQATDAAPSRLAAVKAVSPGYPLRGAVEILPAGAAVAQKAAEIPAPGTVWADPA
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHEECCCHHHHHHHHCCCCCCCCCCCHH
LLDALHLKAGDTVRVGLRTFKVAASISRELDRGFSFVNFSPRLMMRADELAATGLTGYGS
HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCC
RVTYRLLVAGDQQAVTRFEAYAHARVDGGKLRGVGLESLQEGQPQVRQTLDRARHFLTLV
CEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
ALLTALLAAVAIAMAAQRYMRRHLDGCATMRCLGVSRRTLGALFALEFAGIGIVSGAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCCCH
VLGYGGHWALLAALGGLIDVVLPPPTLWPALIGVGAALVLLLGFALPPLVPLTRVPPVRV
HCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LRREWGDASRTAWAAYAIGVVLFAALLIVAAGNLKLGLIVAGGFAGALVGFALIARLVLF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
AAARAVRNARVAAGVGWRYALASLHRRGTASALQITALALGLMCLLLIAITRNDLVAGWR
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
QSTPPDAPNQFLIDIQPDQRADVAAYLTAHGVRDAEPAPMVRGRLVAINGKPVNPDAYPS
CCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
EEARRLVDREFNLSYTTELPSDNRIVEGDWFGTAATPQISIEAGLAKTLNVKPGDMLRFD
HHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCCCCCEEEECCCHHCCCCCCCCEEEEE
VTGLTVDAPITSVRKLDWGSFRVNFFVLMPPPVLKDFPAVYLTSFHLPASDAALLDPLIA
ECCEEECCCHHHHHHCCCCCEEEEEEEEECCHHHHHCCHHHHEEECCCCCCHHHHHHHHH
RYPNLTAIDVAPILAQLQRMMLQVVGAVQFLFAFTLAAGVLVLYTALAGTRDERVREAAL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LRALGASRAQVNAVQRAEFVVVGALAGALASAGAIAVGWVLASRVFDFQLAVDPWLVPAG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCHHHH
IAAGIVCAGAAGWLSLHNVLRRPALQSLRDA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGRQHAAQPPAGQPGHEVSAHAGRFGLRDLIRQAARMTARDWRAGELTLLVLALVLAVA
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ALTSVGFLADRLRQGLERDARQMLGADFVVRADRPVDPSFDQQARALGLRTATTAIFPSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IASATGGQATDAAPSRLAAVKAVSPGYPLRGAVEILPAGAAVAQKAAEIPAPGTVWADPA
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHEECCCHHHHHHHHCCCCCCCCCCCHH
LLDALHLKAGDTVRVGLRTFKVAASISRELDRGFSFVNFSPRLMMRADELAATGLTGYGS
HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCC
RVTYRLLVAGDQQAVTRFEAYAHARVDGGKLRGVGLESLQEGQPQVRQTLDRARHFLTLV
CEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
ALLTALLAAVAIAMAAQRYMRRHLDGCATMRCLGVSRRTLGALFALEFAGIGIVSGAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCCCH
VLGYGGHWALLAALGGLIDVVLPPPTLWPALIGVGAALVLLLGFALPPLVPLTRVPPVRV
HCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LRREWGDASRTAWAAYAIGVVLFAALLIVAAGNLKLGLIVAGGFAGALVGFALIARLVLF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
AAARAVRNARVAAGVGWRYALASLHRRGTASALQITALALGLMCLLLIAITRNDLVAGWR
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
QSTPPDAPNQFLIDIQPDQRADVAAYLTAHGVRDAEPAPMVRGRLVAINGKPVNPDAYPS
CCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
EEARRLVDREFNLSYTTELPSDNRIVEGDWFGTAATPQISIEAGLAKTLNVKPGDMLRFD
HHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCCCCCEEEECCCHHCCCCCCCCEEEEE
VTGLTVDAPITSVRKLDWGSFRVNFFVLMPPPVLKDFPAVYLTSFHLPASDAALLDPLIA
ECCEEECCCHHHHHHCCCCCEEEEEEEEECCHHHHHCCHHHHEEECCCCCCHHHHHHHHH
RYPNLTAIDVAPILAQLQRMMLQVVGAVQFLFAFTLAAGVLVLYTALAGTRDERVREAAL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LRALGASRAQVNAVQRAEFVVVGALAGALASAGAIAVGWVLASRVFDFQLAVDPWLVPAG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCHHHH
IAAGIVCAGAAGWLSLHNVLRRPALQSLRDA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]