Click here to switch to the map view.

The map label for this gene is puuD [H]

Identifier: 78066943

GI number: 78066943

Start: 2559533

End: 2560339

Strand: Reverse

Name: puuD [H]

Synonym: Bcep18194_A5474

Alternate gene names: 78066943

Gene position: 2560339-2559533 (Counterclockwise)

Preceding gene: 78066944

Following gene: 78066942

Centisome position: 69.31

GC content: 73.36

Gene sequence:

>807_bases
ATGCGTGCGCGCCCGATCGTAGCCGTCACCGCCGACCGCATCCTGCGCGGTGCGCATCCGAACCACACCGCGGGGGAGAA
GTACCTGGCCGCGCTCGTCGACGGCGCCGGCGCGCTTGCATTCGTGCTGCCCGCGCTCGGCGCGCGCCAGCCGGCCGACG
CGATCGTCGCGGCGATCGACGGGTTGCTGTTGACCGGCAGCTATTCGAACGTCGAGCCGCATCACTATGGCGGCACCGCG
AGCGCGCCCGACACGCTGCACGACCCCGCGCGCGATGCGACCGCGCTGCCGCTGATCCGCGCGGCGATCGACGCGGGCGT
GCCCGTGCTCGCGATCTGTCGCGGCATGCAGGAGCTGAACGTCGCGTACGGCGGCACGCTGCACCAGAGGCTGCACGCGA
CGACCGGCTTCGACGATCACCGCGAGCGGCCCGCCGATCCGCTCGAACGGCAGTACGGCCCCGCGCACGTCGTGCAGTTC
GCGCCGGGCGGCCTGCTGCAGCGGGTCGCGCGCGGCGCGCAGGCGGCGACGGTCAATTCGCTGCACGATCAGGGCATCGC
GCAGCTCGGCGCGGGGCTCGTCGTCGAAGCCAGTGCGCCCGACGGGCTGGTCGAGGCCGTCAGCGTGCGCGGCGCGCGCG
CGTTCGCGCTCGGCGTGCAGTGGCATCCCGAATGGCGCTACGCGGAACAGTCGCTGTCGCGCGACATCTTCGCGGCATTT
GGCGCGGCGTGCCGCGCGCGCATGACGCATCGCATTCATGCAGCCGGCGGCGCGATGGCGTCGCCGGCTGCATCCGACGT
CGACTGA

Upstream 100 bases:

>100_bases
GGCATGCGCCGCGTCGTGGTGTGCGTGTGCGGCGCCGGCGCGAACCGCCTTCACTGTTCCGCGTGCGACCGTATCGCGCG
CGATTACCGGAGAGACCCCC

Downstream 100 bases:

>100_bases
TAGAGGCCGATCATGCAACCCGAACTGAGCGAATTCCTGCGACAGCACCGCATCACCGAGGTCGAGGCGATCATTCCCGA
CATGGCCGGCATTGCGCGCG

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRARPIVAVTADRILRGAHPNHTAGEKYLAALVDGAGALAFVLPALGARQPADAIVAAIDGLLLTGSYSNVEPHHYGGTA
SAPDTLHDPARDATALPLIRAAIDAGVPVLAICRGMQELNVAYGGTLHQRLHATTGFDDHRERPADPLERQYGPAHVVQF
APGGLLQRVARGAQAATVNSLHDQGIAQLGAGLVVEASAPDGLVEAVSVRGARAFALGVQWHPEWRYAEQSLSRDIFAAF
GAACRARMTHRIHAAGGAMASPAASDVD

Sequences:

>Translated_268_residues
MRARPIVAVTADRILRGAHPNHTAGEKYLAALVDGAGALAFVLPALGARQPADAIVAAIDGLLLTGSYSNVEPHHYGGTA
SAPDTLHDPARDATALPLIRAAIDAGVPVLAICRGMQELNVAYGGTLHQRLHATTGFDDHRERPADPLERQYGPAHVVQF
APGGLLQRVARGAQAATVNSLHDQGIAQLGAGLVVEASAPDGLVEAVSVRGARAFALGVQWHPEWRYAEQSLSRDIFAAF
GAACRARMTHRIHAAGGAMASPAASDVD
>Mature_268_residues
MRARPIVAVTADRILRGAHPNHTAGEKYLAALVDGAGALAFVLPALGARQPADAIVAAIDGLLLTGSYSNVEPHHYGGTA
SAPDTLHDPARDATALPLIRAAIDAGVPVLAICRGMQELNVAYGGTLHQRLHATTGFDDHRERPADPLERQYGPAHVVQF
APGGLLQRVARGAQAATVNSLHDQGIAQLGAGLVVEASAPDGLVEAVSVRGARAFALGVQWHPEWRYAEQSLSRDIFAAF
GAACRARMTHRIHAAGGAMASPAASDVD

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=249, Percent_Identity=44.1767068273092, Blast_Score=197, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 27903; Mature: 27903

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARPIVAVTADRILRGAHPNHTAGEKYLAALVDGAGALAFVLPALGARQPADAIVAAID
CCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHH
GLLLTGSYSNVEPHHYGGTASAPDTLHDPARDATALPLIRAAIDAGVPVLAICRGMQELN
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VAYGGTLHQRLHATTGFDDHRERPADPLERQYGPAHVVQFAPGGLLQRVARGAQAATVNS
HHHCCHHHHHHHHCCCCCHHHCCCCCHHHHCCCCHHEEEECCCHHHHHHHCCCHHHHHHH
LHDQGIAQLGAGLVVEASAPDGLVEAVSVRGARAFALGVQWHPEWRYAEQSLSRDIFAAF
HHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCEEEEEECEECCCHHHHHHHHHHHHHHHH
GAACRARMTHRIHAAGGAMASPAASDVD
HHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRARPIVAVTADRILRGAHPNHTAGEKYLAALVDGAGALAFVLPALGARQPADAIVAAID
CCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHH
GLLLTGSYSNVEPHHYGGTASAPDTLHDPARDATALPLIRAAIDAGVPVLAICRGMQELN
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VAYGGTLHQRLHATTGFDDHRERPADPLERQYGPAHVVQFAPGGLLQRVARGAQAATVNS
HHHCCHHHHHHHHCCCCCHHHCCCCCHHHHCCCCHHEEEECCCHHHHHHHCCCHHHHHHH
LHDQGIAQLGAGLVVEASAPDGLVEAVSVRGARAFALGVQWHPEWRYAEQSLSRDIFAAF
HHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCEEEEEECEECCCHHHHHHHHHHHHHHHH
GAACRARMTHRIHAAGGAMASPAASDVD
HHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]