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The map label for this gene is cyaB [H]

Identifier: 78066845

GI number: 78066845

Start: 2439472

End: 2440323

Strand: Reverse

Name: cyaB [H]

Synonym: Bcep18194_A5376

Alternate gene names: 78066845

Gene position: 2440323-2439472 (Counterclockwise)

Preceding gene: 78066846

Following gene: 78066844

Centisome position: 66.06

GC content: 63.26

Gene sequence:

>852_bases
ATGTCGATCGGCGCGGCTTTGAGCCTGTCAGGCTGTAATTTAGATGTACTAAATCCGAAAGGAAGCGTGGGCGCTGCCGA
AAAGGCGCTGATCGCGACGTCCACCTGGGCGATGCTGATCGTCGTCGTGCCGGTGATCCTGCTCACGCTGTGGTTTGCGT
GGCGTTACCGCGCGTCGAACCGCAACGCCACCTACGCGCCGAACTGGTCGCACTCGACTGCGATCGAGGTCGTGATCTGG
ACGGTGCCGACGCTGATCATCCTGTTCCTCGGCGTGCTCACGTGGAAGACCACGCACGAGCTCGACCCGTACAAGCCGCT
CGAGTCGTCGGTGAAGCCGATCGATGTCGAGGTCGTCGCACTCGACTGGAAGTGGCTGTTCATCTATCCGGAACTCGGCA
TCGCGTCGGTGAACCAGCTCGCGATTCCGGTCGGCACGCCGGTGAACTTCCGCATCACGTCGGATTCGGTGATGAACTCG
TTCTTCATCCCGCAGCTCGGCGGCCAGGTCTACGCGATGGCCGGCATGCAGACGCGCCTGCACCTGATCGCCGACGAGGC
CGGCAACTATGCGGGCACGTCCGCCAACTTCAGCGGCCGCGGCTTCTCCGACATGAAGTTCCGCACGCTCGCCGAGCCGC
GCGAACAGTTCGATGCATGGGTGCAGAAGGTGAAGGCGTCGCCGGACCGGCTCGACGCGACTGTGTACGGCACCGTCGCG
CAGCCGAGCGAGAAGGCGCCCGTGCGCTACTTCTCGTCGGTCGATCCGCGACTCTTCCACAACATCATCGCGAAATACAA
CGATGGCCACGTCCTCGACCTGAAGGACGCCGCCTGCGGCACGAAGGGGTAA

Upstream 100 bases:

>100_bases
ACTTTCGTGGATCGAATGCGCATCGGGCATACGCAAACGGATTCAATGACCCTCGGGCTGTGTGATGAAAAGAAAAGCTT
CTAAAGGCGGAGTGGCGCTG

Downstream 100 bases:

>100_bases
CGCATGTTCGGCAAACTCACACTCTCGGCGATCCCGTTCGATCAGCCCATCATCATGGGGGCCGGTGCCTTCATGGGGCT
GATCGTGCTGGGCATTCTCG

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome A1 subunit 2; Oxidase BA(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSIGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASNRNATYAPNWSHSTAIEVVIW
TVPTLIILFLGVLTWKTTHELDPYKPLESSVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPVNFRITSDSVMNS
FFIPQLGGQVYAMAGMQTRLHLIADEAGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASPDRLDATVYGTVA
QPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG

Sequences:

>Translated_283_residues
MSIGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASNRNATYAPNWSHSTAIEVVIW
TVPTLIILFLGVLTWKTTHELDPYKPLESSVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPVNFRITSDSVMNS
FFIPQLGGQVYAMAGMQTRLHLIADEAGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASPDRLDATVYGTVA
QPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG
>Mature_282_residues
SIGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASNRNATYAPNWSHSTAIEVVIWT
VPTLIILFLGVLTWKTTHELDPYKPLESSVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPVNFRITSDSVMNSF
FIPQLGGQVYAMAGMQTRLHLIADEAGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASPDRLDATVYGTVAQ
PSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=269, Percent_Identity=58.364312267658, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 31079; Mature: 30948

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASN
CCCCCEEEECCCCEEEECCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHEECCC
RNATYAPNWSHSTAIEVVIWTVPTLIILFLGVLTWKTTHELDPYKPLESSVKPIDVEVVA
CCCEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEEEE
LDWKWLFIYPELGIASVNQLAIPVGTPVNFRITSDSVMNSFFIPQLGGQVYAMAGMQTRL
EEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHCCCCCCCCEEEEECCCEEE
HLIADEAGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASPDRLDATVYGTVA
EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEEC
QPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG
CCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SIGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASN
CCCCEEEECCCCEEEECCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHEECCC
RNATYAPNWSHSTAIEVVIWTVPTLIILFLGVLTWKTTHELDPYKPLESSVKPIDVEVVA
CCCEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEEEE
LDWKWLFIYPELGIASVNQLAIPVGTPVNFRITSDSVMNSFFIPQLGGQVYAMAGMQTRL
EEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHCCCCCCCCEEEEECCCEEE
HLIADEAGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASPDRLDATVYGTVA
EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEEC
QPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG
CCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8392509 [H]