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The map label for this gene is cyoC [H]

Identifier: 78066843

GI number: 78066843

Start: 2436854

End: 2437462

Strand: Reverse

Name: cyoC [H]

Synonym: Bcep18194_A5374

Alternate gene names: 78066843

Gene position: 2437462-2436854 (Counterclockwise)

Preceding gene: 78066844

Following gene: 78066842

Centisome position: 65.98

GC content: 65.35

Gene sequence:

>609_bases
ATGTTGCAGAAAACCTTGAGCGCAACCCTGCTCGAGCACGACGACCATCCGCCGTCGCATTCGGTGTTCGGGTTCTGGCT
GTACCTGATGACCGACTGCGTGATCTTTGCGGCGCTGTTCGCGACGTTCGCGGTGCTCGGCCAGCAGCATGCGGGCGGGC
CGACCGCGAAAGACCTGTTCGACATTCCGGGCGTCGCGGTGGAAACCGCCGCGCTGCTGCTGTCGAGCATCACGTACGGT
TTCGCGATGCTCGCTGCGTACAAGCAGCGGCGCGGCGCGCTGCTCGCGTGGCTCGCGGTGACGTTCGTGCTCGGCGCGGC
GTTTCTCGTGATGGAACTGCGCGAGTTCTCGCACCTGATCGCGGAGGGCGCAGGCCCGCAGCGCAGCGCGTTCCTGTCGG
CGTTCTTCACGCTGGTCGGCACGCACGGGCTGCACGTGACGGCCGGGCTGCTGTGGATGATCGTGCTCGCCGGGCAGATC
GTGTTCCGCGGCGGCGACCTGACCGATCGCGACCTGCGACGCCTGACGTGCCTGAGCCTCTTCTGGCACTTCCTCGACAT
CGTGTGGATCTGCGTGTTTTCCTTTGTCTATCTCGCGAGCGTGATCTAA

Upstream 100 bases:

>100_bases
GGTATTACATCCCCGCGTCGACGGTGCGGAAGATCGAAGACAAGCAGCCGACGCAGCGCGTGGCCGCGCGCGTCGACGAC
GTGGAACTGGAGGCCAACTG

Downstream 100 bases:

>100_bases
ATGGCCCATTCGCATTCGTCTCAACTCGAAGAAGGGCACGGCAGTGTCGGCGGCTACGTCGCCGGTTTCATCCTGTCGGT
GCTGCTCACAGCCGCGTCGT

Product: Heme/copper-type cytochrome/quinol oxidase subunit 3-like

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLQKTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGQQHAGGPTAKDLFDIPGVAVETAALLLSSITYG
FAMLAAYKQRRGALLAWLAVTFVLGAAFLVMELREFSHLIAEGAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQI
VFRGGDLTDRDLRRLTCLSLFWHFLDIVWICVFSFVYLASVI

Sequences:

>Translated_202_residues
MLQKTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGQQHAGGPTAKDLFDIPGVAVETAALLLSSITYG
FAMLAAYKQRRGALLAWLAVTFVLGAAFLVMELREFSHLIAEGAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQI
VFRGGDLTDRDLRRLTCLSLFWHFLDIVWICVFSFVYLASVI
>Mature_202_residues
MLQKTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGQQHAGGPTAKDLFDIPGVAVETAALLLSSITYG
FAMLAAYKQRRGALLAWLAVTFVLGAAFLVMELREFSHLIAEGAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQI
VFRGGDLTDRDLRRLTCLSLFWHFLDIVWICVFSFVYLASVI

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=188, Percent_Identity=59.5744680851064, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22184; Mature: 22184

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGQQHAGGPTAKDLF
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DIPGVAVETAALLLSSITYGFAMLAAYKQRRGALLAWLAVTFVLGAAFLVMELREFSHLI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVFRGGDLTDRDLRRLTCLSL
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FWHFLDIVWICVFSFVYLASVI
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQKTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGQQHAGGPTAKDLF
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DIPGVAVETAALLLSSITYGFAMLAAYKQRRGALLAWLAVTFVLGAAFLVMELREFSHLI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVFRGGDLTDRDLRRLTCLSL
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FWHFLDIVWICVFSFVYLASVI
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]