| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is gltX
Identifier: 78066834
GI number: 78066834
Start: 2426327
End: 2427865
Strand: Reverse
Name: gltX
Synonym: Bcep18194_A5365
Alternate gene names: 78066834
Gene position: 2427865-2426327 (Counterclockwise)
Preceding gene: 78066836
Following gene: 78066833
Centisome position: 65.72
GC content: 66.41
Gene sequence:
>1539_bases ATGTCCGGCGCGAGTATAATTCCGGCTTCTTTCCCGTTCCGGGCGTCGCCGGCCCCGTTGCTGTCCGGGCTGCCGCCGTC GATCCCGCGTCGAATCATTCATGCGCCCCAGGCGTTCGAGTTACCGTTTATGACCCGTCCTGTCCGTACCCGCTTCGCGC CGAGCCCCACCGGCTTCATCCACCTCGGCAACATCCGCTCCGCACTCTATCCGTGGGCGTTCGCCCGCAAGATGAAGGGC ACGTTCGTGCTGCGCATCGAGGATACCGACGTCGAGCGCTCGTCGCAGGAAGCAGTCGACGCGATCCTCGATGGGATGCA GTGGCTCGGCCTGGATTTCGACGAAGGCCCGATCTATCAGATGCAGCGGATGGACCGCTATCGCGAGGTGATCGCGCAGA TGCTCGAAAAGGGCCTCGCGTACCCGTGCTACATGTCGGCCGAGGAACTCGACGCGCTGCGCGAACGCCAGCGCGAGGCC GGCCTGAAGCCGCGCTATGACGGCACGTGGCGTCCGGAGCCCGGCAAGGTGCTGCCGGAGCCGCCGGCCGGCGTGAAGCC GGTGCTGCGCTTCCGCAATCCGCTGACCGGCACGGTCGTGTGGGACGACGCCGTGAAGGGGCGTGTCGAGATCTCGAATG AAGAGCTCGACGACCTCGTGATCGCGCGCCCGGACGGCACGCCGATCTACAACTTCTGCGTGGTGGTGGACGACATGGAC ATGGGCATAACGCACGTGATCCGTGGCGATGACCACGTGAACAACACGCCGCGCCAGATCAACATCCTGAATGCGCTCGG CGGCGAGCCGCCCGTCTACGCGCACCTGCCGACCGTGCTGAACGAGCAGGGCGAGAAGATGAGCAAGCGCCATGGCGCGA TGAGCGTGATGGCGTACCGCGACGCGGGCTTCCTGCCTGAAGCCGTCGTCAACTATCTCGCGCGCCTCGGCTGGTCGCAC GGCGACGCCGAGATCTTCTCGCGCGAGCAGTTCGTCGAATGGTTCGATCTCGAGCATCTCGGCAAGTCGCCCGCGCAGTA CGACCACAGCAAGCTGAGCTGGCTGAACGCGCATTACATCAAGGAAGCGGACAACGCGCGCCTCGCCGAGCTGGCGAAGC CGTTCCTCGCCGCCCTCGGCATCGACGATGCGGCGATCGCGACGGGCCCTGCGCTCGAAGCGGTGGTCGGGCTGATGAAG GATCGCGCGACGACGGTCAAGGAGATCGCGGAAGGCGCCACGATGTTCTATCGTGTGCCGGCACCGGAAGCCGATGCGCT TGCACAGCACGTGACCGATGTGGTGCGTCCGGCGCTGGCCGATCTCGTCGCTGCGCTGAAGGCGGCCGACTGGACCAAGG AGGCCGTGTCCGCCGCGCTGAAGGCGACGCTCGGCACGCACAAGCTGAAGATGCCGCAACTCGCGATGCCGGTGCGCCTG CTGGTGGCCGGTACGACGCACACGCCGTCGATCGATGCGGTGCTCGTGCTGTTCGGTCGCGATGTCGTGGTGTCGCGCAT CGAGGCCGCGCTGGCCTGA
Upstream 100 bases:
>100_bases TAGGTTCCGAGCGACCGTACGGCAGGTTCCGTATGGCCGGCGCCGCGCCGGCTGGCGGCCGCGGCGCGCACATCATAAAG CAAGCGGCGCGCTTGGCGCG
Downstream 100 bases:
>100_bases GGTTCGAGGGCGAGCGAAGCTGCCTGTGCGTGACATCGCGGCAGCTTCGCAAAAAATTTCGCTCGAATCGCAAAAAGGGT ATTTACAAGTTCAAAGTAGC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSGASIIPASFPFRASPAPLLSGLPPSIPRRIIHAPQAFELPFMTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKG TFVLRIEDTDVERSSQEAVDAILDGMQWLGLDFDEGPIYQMQRMDRYREVIAQMLEKGLAYPCYMSAEELDALRERQREA GLKPRYDGTWRPEPGKVLPEPPAGVKPVLRFRNPLTGTVVWDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD MGITHVIRGDDHVNNTPRQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSVMAYRDAGFLPEAVVNYLARLGWSH GDAEIFSREQFVEWFDLEHLGKSPAQYDHSKLSWLNAHYIKEADNARLAELAKPFLAALGIDDAAIATGPALEAVVGLMK DRATTVKEIAEGATMFYRVPAPEADALAQHVTDVVRPALADLVAALKAADWTKEAVSAALKATLGTHKLKMPQLAMPVRL LVAGTTHTPSIDAVLVLFGRDVVVSRIEAALA
Sequences:
>Translated_512_residues MSGASIIPASFPFRASPAPLLSGLPPSIPRRIIHAPQAFELPFMTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKG TFVLRIEDTDVERSSQEAVDAILDGMQWLGLDFDEGPIYQMQRMDRYREVIAQMLEKGLAYPCYMSAEELDALRERQREA GLKPRYDGTWRPEPGKVLPEPPAGVKPVLRFRNPLTGTVVWDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD MGITHVIRGDDHVNNTPRQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSVMAYRDAGFLPEAVVNYLARLGWSH GDAEIFSREQFVEWFDLEHLGKSPAQYDHSKLSWLNAHYIKEADNARLAELAKPFLAALGIDDAAIATGPALEAVVGLMK DRATTVKEIAEGATMFYRVPAPEADALAQHVTDVVRPALADLVAALKAADWTKEAVSAALKATLGTHKLKMPQLAMPVRL LVAGTTHTPSIDAVLVLFGRDVVVSRIEAALA >Mature_511_residues SGASIIPASFPFRASPAPLLSGLPPSIPRRIIHAPQAFELPFMTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGT FVLRIEDTDVERSSQEAVDAILDGMQWLGLDFDEGPIYQMQRMDRYREVIAQMLEKGLAYPCYMSAEELDALRERQREAG LKPRYDGTWRPEPGKVLPEPPAGVKPVLRFRNPLTGTVVWDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMDM GITHVIRGDDHVNNTPRQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSVMAYRDAGFLPEAVVNYLARLGWSHG DAEIFSREQFVEWFDLEHLGKSPAQYDHSKLSWLNAHYIKEADNARLAELAKPFLAALGIDDAAIATGPALEAVVGLMKD RATTVKEIAEGATMFYRVPAPEADALAQHVTDVVRPALADLVAALKAADWTKEAVSAALKATLGTHKLKMPQLAMPVRLL VAGTTHTPSIDAVLVLFGRDVVVSRIEAALA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=494, Percent_Identity=29.5546558704453, Blast_Score=204, Evalue=2e-52, Organism=Escherichia coli, GI1788743, Length=468, Percent_Identity=50.2136752136752, Blast_Score=466, Evalue=1e-132, Organism=Escherichia coli, GI226510925, Length=245, Percent_Identity=36.734693877551, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1786895, Length=207, Percent_Identity=25.6038647342995, Blast_Score=69, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71993394, Length=481, Percent_Identity=29.3139293139293, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17543332, Length=130, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324540, Length=332, Percent_Identity=36.7469879518072, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6321192, Length=233, Percent_Identity=26.1802575107296, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=123, Percent_Identity=32.520325203252, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24665321, Length=498, Percent_Identity=29.3172690763052, Blast_Score=218, Evalue=9e-57,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56405; Mature: 56274
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGASIIPASFPFRASPAPLLSGLPPSIPRRIIHAPQAFELPFMTRPVRTRFAPSPTGFI CCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEE HLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSSQEAVDAILDGMQWLGLDFDEGPIYQ EECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHH MQRMDRYREVIAQMLEKGLAYPCYMSAEELDALRERQREAGLKPRYDGTWRPEPGKVLPE HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PPAGVKPVLRFRNPLTGTVVWDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD CCCCCHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCCCEEEEEEEEECCC MGITHVIRGDDHVNNTPRQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSVMAYR CCEEEEECCCCCCCCCCCEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEEC DAGFLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHSKLSWLNAHYI CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KEADNARLAELAKPFLAALGIDDAAIATGPALEAVVGLMKDRATTVKEIAEGATMFYRVP HCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC APEADALAQHVTDVVRPALADLVAALKAADWTKEAVSAALKATLGTHKLKMPQLAMPVRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHCCEEE LVAGTTHTPSIDAVLVLFGRDVVVSRIEAALA EEECCCCCCCCCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure SGASIIPASFPFRASPAPLLSGLPPSIPRRIIHAPQAFELPFMTRPVRTRFAPSPTGFI CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEE HLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSSQEAVDAILDGMQWLGLDFDEGPIYQ EECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHH MQRMDRYREVIAQMLEKGLAYPCYMSAEELDALRERQREAGLKPRYDGTWRPEPGKVLPE HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PPAGVKPVLRFRNPLTGTVVWDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD CCCCCHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCCCEEEEEEEEECCC MGITHVIRGDDHVNNTPRQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSVMAYR CCEEEEECCCCCCCCCCCEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEEC DAGFLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHSKLSWLNAHYI CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KEADNARLAELAKPFLAALGIDDAAIATGPALEAVVGLMKDRATTVKEIAEGATMFYRVP HCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC APEADALAQHVTDVVRPALADLVAALKAADWTKEAVSAALKATLGTHKLKMPQLAMPVRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHCCEEE LVAGTTHTPSIDAVLVLFGRDVVVSRIEAALA EEECCCCCCCCCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA