| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is btuE [C]
Identifier: 78066813
GI number: 78066813
Start: 2403045
End: 2403524
Strand: Reverse
Name: btuE [C]
Synonym: Bcep18194_A5344
Alternate gene names: 78066813
Gene position: 2403524-2403045 (Counterclockwise)
Preceding gene: 78066815
Following gene: 78066806
Centisome position: 65.06
GC content: 63.33
Gene sequence:
>480_bases ATGTCCACCCTGTATTCGTTCAGCGCAGAGACGCTTGCCGGCGCGCCGGCCTCGCTCGACGCGTATCGCGGCAAGGTGCT GCTGATCGTCAACACCGCGAGCGAGTGTGGTTTCACGCCGCAGTACGCGGGCCTGCAGAAGCTGTACGACCAGTACGCGG CGCGCGGTTTCTATGTGCTCGGCTTCCCGTGCAACCAGTTCGGCAAGCAGGAGCCCGGCGACGCCGCGCAAATCGGCGCG TTCTGCGAGCGCAATTACGGCGTCACGTTCCCGATGTTCGCGAAGATCGACGTGAAGGGCGACCATGCGCATCCGCTGTA CCGCTACCTGACCGACGAGGCGCCCGGCATTCTCGGCCTCAAGGCGATCAAGTGGAATTTCACGAAATTCCTGGTCGATC GCGAAGGGCGCATCGTCAAGCGCTACGCGCCGTCGACCAAGCCGGACGAAATCGCCGCGGATATCGACAAGCTGCTGTGA
Upstream 100 bases:
>100_bases GCGCGCCGCTCGCGCCGGGCATTGGCCGTTCGGCGGATGCCGCAACGGGGCAATTTCGCCTAGACTCCACGTCGATCCGG TTTCGTAAAAGGAGTGCCCG
Downstream 100 bases:
>100_bases CGGCGGCCGGCGGCGTTCGCGGCGCCGGTGCGGATCGCACGGCCGCCGCCGCCGTCCCGGCCGTTAGAGGATCGGTGCGA ACAGCCGCGCGACGTGCATC
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSTLYSFSAETLAGAPASLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFYVLGFPCNQFGKQEPGDAAQIGA FCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGLKAIKWNFTKFLVDREGRIVKRYAPSTKPDEIAADIDKLL
Sequences:
>Translated_159_residues MSTLYSFSAETLAGAPASLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFYVLGFPCNQFGKQEPGDAAQIGA FCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGLKAIKWNFTKFLVDREGRIVKRYAPSTKPDEIAADIDKLL >Mature_158_residues STLYSFSAETLAGAPASLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFYVLGFPCNQFGKQEPGDAAQIGAF CERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGLKAIKWNFTKFLVDREGRIVKRYAPSTKPDEIAADIDKLL
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=156, Percent_Identity=47.4358974358974, Blast_Score=140, Evalue=5e-34, Organism=Homo sapiens, GI90903240, Length=156, Percent_Identity=47.4358974358974, Blast_Score=139, Evalue=8e-34, Organism=Homo sapiens, GI15618997, Length=157, Percent_Identity=43.9490445859873, Blast_Score=134, Evalue=2e-32, Organism=Homo sapiens, GI192455698, Length=160, Percent_Identity=40, Blast_Score=134, Evalue=3e-32, Organism=Homo sapiens, GI90903238, Length=131, Percent_Identity=48.0916030534351, Blast_Score=115, Evalue=1e-26, Organism=Homo sapiens, GI41406084, Length=186, Percent_Identity=37.0967741935484, Blast_Score=98, Evalue=4e-21, Organism=Homo sapiens, GI4557629, Length=178, Percent_Identity=35.3932584269663, Blast_Score=96, Evalue=1e-20, Organism=Homo sapiens, GI6006001, Length=178, Percent_Identity=34.8314606741573, Blast_Score=94, Evalue=4e-20, Organism=Homo sapiens, GI32967607, Length=181, Percent_Identity=31.4917127071823, Blast_Score=85, Evalue=3e-17, Organism=Homo sapiens, GI33186887, Length=177, Percent_Identity=32.2033898305085, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI41406082, Length=70, Percent_Identity=52.8571428571429, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1788003, Length=167, Percent_Identity=40.1197604790419, Blast_Score=145, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17506887, Length=160, Percent_Identity=46.25, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17535473, Length=160, Percent_Identity=44.375, Blast_Score=145, Evalue=7e-36, Organism=Caenorhabditis elegans, GI193210707, Length=162, Percent_Identity=44.4444444444444, Blast_Score=134, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71993584, Length=158, Percent_Identity=41.1392405063291, Blast_Score=131, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17550320, Length=181, Percent_Identity=33.1491712707182, Blast_Score=109, Evalue=8e-25, Organism=Caenorhabditis elegans, GI193209493, Length=181, Percent_Identity=33.7016574585635, Blast_Score=108, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=40, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71999642, Length=76, Percent_Identity=40.7894736842105, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193210709, Length=72, Percent_Identity=50, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6319721, Length=158, Percent_Identity=51.8987341772152, Blast_Score=186, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322228, Length=159, Percent_Identity=50.9433962264151, Blast_Score=185, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322826, Length=159, Percent_Identity=45.9119496855346, Blast_Score=161, Evalue=4e-41, Organism=Drosophila melanogaster, GI24656772, Length=160, Percent_Identity=46.875, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI24656767, Length=160, Percent_Identity=46.875, Blast_Score=148, Evalue=1e-36, Organism=Drosophila melanogaster, GI24656777, Length=160, Percent_Identity=46.875, Blast_Score=148, Evalue=1e-36, Organism=Drosophila melanogaster, GI85726443, Length=159, Percent_Identity=44.0251572327044, Blast_Score=129, Evalue=9e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 17588; Mature: 17457
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLYSFSAETLAGAPASLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFYVL CCCCCCCCCHHHCCCCCCCHHHCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCEEEE GFPCNQFGKQEPGDAAQIGAFCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGL ECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE KAIKWNFTKFLVDREGRIVKRYAPSTKPDEIAADIDKLL EEEEECCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure STLYSFSAETLAGAPASLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFYVL CCCCCCCCHHHCCCCCCCHHHCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCEEEE GFPCNQFGKQEPGDAAQIGAFCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGL ECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE KAIKWNFTKFLVDREGRIVKRYAPSTKPDEIAADIDKLL EEEEECCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]