| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066804
Identifier: 78066804
GI number: 78066804
Start: 2390690
End: 2391973
Strand: Reverse
Name: 78066804
Synonym: Bcep18194_A5335
Alternate gene names: NA
Gene position: 2391973-2390690 (Counterclockwise)
Preceding gene: 78066805
Following gene: 78066803
Centisome position: 64.75
GC content: 68.46
Gene sequence:
>1284_bases ATGGACGAGTTGACACTCGGTTTGATCGGCGCGGGCGCCGTCGTGGTGGGCGGCGTCGTGGTTTACAACGCATGGCAGGG CGCGAAGGTGCGGCGCAGGATGCCGCGCCCGATGCCGGAAGAAGCGGCCGAGGCGATGAATCGCCCCGAACGCGAAGAAG AATTGCCGTTCATCGAGCCGGTGCGTCAGCCGGTGCGGCGCGAGCCCGCGGCGCCGGCTCCGGCGGCCGCCACAGCCGGC ACGCCGGCCGAAGTCGCACGCGTCGAGCCGACGTTCGGTGGTGTAGCGCCGGCCGACATGCCGGCCGATCTGCAGGCCGA GGCGACCGGTGTCGATACACCGGCCGAGTCGGTCGAGCCGGTTGCCGGCGAGGAAGCCGCACCGGCCTCCACGCACGAAA CGCATGCTGAACCGGCGGAGCTGGCCGAACCCGTGCTACCGGCTGCCACGACGATCTCGTCGGCACCGCCGGCGATCGTC GACCGCCGGATCGACTGCATCGTGCCGATCCGCCTCGGCGGGTTGCTGCCGGGCGACAAGATCCTGCCGGCTGCGCAGCG GCTGCGCCGCGCGGGCAGCAAGCCCGTGCATATCGAAGGCAAGCCGGAGGGCGGCCAGTGGGAGTTGCTGCAGAACGGCG TGCGCTACGAGGAACTGCGTGCGGCCGCGCAGCTCGCGAACCGCAGCGGTGCACTGAACGAGCTCGAGTTCTCCGAATTC GTGACGGGCGTCCAGCAGTTCGCCGACGCGATCGACGGCGCGCCGGAATTCCCGGACATGATGGAAACGGTCGCGATGGC GCGCGAGCTCGACGCGTTCGCCGCGCAATGCGACGCGCAACTGTCGATCAACGTGATGTCGGACGGCGCGCCGTGGTCGG CGAACTACGTGCAGGCGGTCGCGTCGCAGGACGGGCTGCTGCTGTCGCGCGACGGCACGCGTTTCGTGAAGCTCGACGCG AAGCAGAACCCGGTGTTCATGCTGCAGTTCGGCGACACGAACTTCCTGCGTGACGATCTCACGTACAAGGGCGGCAACAT GATCACGCTGGTGCTCGACGTGCCGGTCGCCGAAGAGGACATCCTGCCGTTCCGGCTGATGTGCGACTACGCGAAATCGC TGTCCGAACGGATCGGCGCACGCGTGGTCGACGATTCGCGCCGGCCGCTGCCGGAATCGACGCTGGTCGCGATCGATCAG CAACTGATGAAGCTGTACGCGAAGCTCGAGGAAGCAGGTATCCCGGCCGGTTCGCCGGTCACGCGCCGCCTCTTCAGCCA GTAA
Upstream 100 bases:
>100_bases TTTGCCCAGAATTGACGTTTGACGAAACCGGACCGCGTTCGCGCGGCGCATGGGCGCCCGTTCGCGGTTCCGACGAACAA GAATTGCTGATGGAGCGTGC
Downstream 100 bases:
>100_bases CGCGAACGCGCGGACGGCGGGCGTCGACGCCCGCCGTTCGTCGCTGCAGCGCACACGTTGCTGTTTGCGCTGCAGCACGC GCATCGGGCGCGCATTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: ZipA Related Protein Possibly Involved In; Protein ZipA; Transmembrane Protein; Chromosome Segregation Protein Smc
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPEREEELPFIEPVRQPVRREPAAPAPAAATAG TPAEVARVEPTFGGVAPADMPADLQAEATGVDTPAESVEPVAGEEAAPASTHETHAEPAELAEPVLPAATTISSAPPAIV DRRIDCIVPIRLGGLLPGDKILPAAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFSEF VTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDA KQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEEDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAIDQ QLMKLYAKLEEAGIPAGSPVTRRLFSQ
Sequences:
>Translated_427_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPEREEELPFIEPVRQPVRREPAAPAPAAATAG TPAEVARVEPTFGGVAPADMPADLQAEATGVDTPAESVEPVAGEEAAPASTHETHAEPAELAEPVLPAATTISSAPPAIV DRRIDCIVPIRLGGLLPGDKILPAAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFSEF VTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDA KQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEEDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAIDQ QLMKLYAKLEEAGIPAGSPVTRRLFSQ >Mature_427_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPEREEELPFIEPVRQPVRREPAAPAPAAATAG TPAEVARVEPTFGGVAPADMPADLQAEATGVDTPAESVEPVAGEEAAPASTHETHAEPAELAEPVLPAATTISSAPPAIV DRRIDCIVPIRLGGLLPGDKILPAAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFSEF VTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDA KQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEEDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAIDQ QLMKLYAKLEEAGIPAGSPVTRRLFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45831; Mature: 45831
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPEREEELPFIEP CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCHHHHHHHCCCCCHHCCCHHHH VRQPVRREPAAPAPAAATAGTPAEVARVEPTFGGVAPADMPADLQAEATGVDTPAESVEP HHHHHHCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC VAGEEAAPASTHETHAEPAELAEPVLPAATTISSAPPAIVDRRIDCIVPIRLGGLLPGDK CCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCC ILPAAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFSEF CCHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH VTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH ASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEED HCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCCCC ILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAIDQQLMKLYAKLEEAGIPAGSPV CCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TRRLFSQ HHHHHCC >Mature Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPEREEELPFIEP CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCHHHHHHHCCCCCHHCCCHHHH VRQPVRREPAAPAPAAATAGTPAEVARVEPTFGGVAPADMPADLQAEATGVDTPAESVEP HHHHHHCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC VAGEEAAPASTHETHAEPAELAEPVLPAATTISSAPPAIVDRRIDCIVPIRLGGLLPGDK CCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCC ILPAAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFSEF CCHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH VTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH ASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEED HCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCCCC ILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAIDQQLMKLYAKLEEAGIPAGSPV CCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TRRLFSQ HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA