| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066773
Identifier: 78066773
GI number: 78066773
Start: 2356487
End: 2357707
Strand: Direct
Name: 78066773
Synonym: Bcep18194_A5304
Alternate gene names: NA
Gene position: 2356487-2357707 (Clockwise)
Preceding gene: 78066765
Following gene: 78066774
Centisome position: 63.79
GC content: 75.1
Gene sequence:
>1221_bases ATGGATTCGCTGATCACGGCTGCCGCGCGCGCGCTCGCGGCCGGTGACGCGCTCGGCGCGCTGAACCGCGTCGCGCTGCG TGACGATGCGCCGGCGCTCGCGCTGCGCGGGATCGCGATGGCGCAGCTCGGCGATTTCGAACGCGCGCGCACACTCGTGC GCGCCGCCGCCCGTGCGTTCGGCGCGAAGGAGGCCGTGGCGCGTGCGCGCTGCGTCGTCGCGGAAGCGGAGATCGCGCTC GCGTCGCGCGACCTGCGCTGGCCGACGCGCGCGCTCGATGCCGCGTGCGCGACGCTCGACGCGCACGGCGACCGCGCGAA CGCCGCGCATGCGCGCTATCTCGGCGTGCGCCGGCTGCTGCTGATCGGCCAGCTCGACGATGCCGAGCGGATGCTCGCGA ATCTCGATCCCGCACCGCTGCCGGCTGCATCGCGCGCCGCCCATGAGCTGATCGCGGCCGGCATCGCGATGCGCCGCATC CGTACGCACGCGGCCCGCGCTGCACTCGCCCGAGCACGCGCAGCGGCCCGCGACGCCGGCATCGCCGCGCTGACGGCCGA GGTCGACACCGCGGCACGGGTGCTCGACGCACCGGCCGCCCGCCTCATCGCGCGCGGTACATCGCGGCTCGTGCAGCTCG ACGAAGTCGAGACGCTGTTCGCGTCGAATGCGCTCGTCGTCGATGCGTGCCGCCACACGGTGCGCGACGCGCGCACGACC GTGTCGCTTGCGCGGCGGCCCGTGCTGTTCGTGCTCGCCCGCGCGCTCGGCGAGGCATGGCCGGCCGACGTGTCGCGCAA CGCGCTCGTCGCCGTCGCGTTTCGCGCGAAACACGCGGACGAATCGCATCGCGCGCGCCTGCGTGTCGAGATCGGCCGGC TGCGCGCGGTGCTGCGGCCGCTCGCGAACGTCATCGCCACGCCGCGCGGCTTCGCGCTCGAACCGCTCGGCATACGCGAG ACCGTCGTCCTGGCGCGCCCGGTCGACGATCGCCACGCGGCCGTGCTCGCGCTCCTCGCCGATGGCGAGGCATGGTCGAG CTCCGCGCTGGCACTGGCCCTCGGCACGAGCCAGCGCACCGTGCAGCGCGCACTCGACGCGCTCGCCGAAGCCGACAAGG TCCAGGCGCTAGGCCGCGGCCGCGCGCGCCGCTGGATGACGCCGCCGCTGCCCGGTTTCGCGACGACCTTGTTACTCCCT GCCCCGCTGCCGGGCGATTAG
Upstream 100 bases:
>100_bases TCCGATGGGTATCCGGGCACGGCGTCCGGTGCCGTGTGCGTGGTGCTAGATTAGCGGCGGGTATCGGACCGAAGGGAGTG ACAAGTGTGTCGGGATTCGG
Downstream 100 bases:
>100_bases GATGACCTCACCGAACGACGAGGTGACGAACATGAAACGCTCCAGTGCAGACATCCTTCGCGAATACGGCCCGTTTCCGG GCGTCGACGGCGTACACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDSLITAAARALAAGDALGALNRVALRDDAPALALRGIAMAQLGDFERARTLVRAAARAFGAKEAVARARCVVAEAEIAL ASRDLRWPTRALDAACATLDAHGDRANAAHARYLGVRRLLLIGQLDDAERMLANLDPAPLPAASRAAHELIAAGIAMRRI RTHAARAALARARAAARDAGIAALTAEVDTAARVLDAPAARLIARGTSRLVQLDEVETLFASNALVVDACRHTVRDARTT VSLARRPVLFVLARALGEAWPADVSRNALVAVAFRAKHADESHRARLRVEIGRLRAVLRPLANVIATPRGFALEPLGIRE TVVLARPVDDRHAAVLALLADGEAWSSSALALALGTSQRTVQRALDALAEADKVQALGRGRARRWMTPPLPGFATTLLLP APLPGD
Sequences:
>Translated_406_residues MDSLITAAARALAAGDALGALNRVALRDDAPALALRGIAMAQLGDFERARTLVRAAARAFGAKEAVARARCVVAEAEIAL ASRDLRWPTRALDAACATLDAHGDRANAAHARYLGVRRLLLIGQLDDAERMLANLDPAPLPAASRAAHELIAAGIAMRRI RTHAARAALARARAAARDAGIAALTAEVDTAARVLDAPAARLIARGTSRLVQLDEVETLFASNALVVDACRHTVRDARTT VSLARRPVLFVLARALGEAWPADVSRNALVAVAFRAKHADESHRARLRVEIGRLRAVLRPLANVIATPRGFALEPLGIRE TVVLARPVDDRHAAVLALLADGEAWSSSALALALGTSQRTVQRALDALAEADKVQALGRGRARRWMTPPLPGFATTLLLP APLPGD >Mature_406_residues MDSLITAAARALAAGDALGALNRVALRDDAPALALRGIAMAQLGDFERARTLVRAAARAFGAKEAVARARCVVAEAEIAL ASRDLRWPTRALDAACATLDAHGDRANAAHARYLGVRRLLLIGQLDDAERMLANLDPAPLPAASRAAHELIAAGIAMRRI RTHAARAALARARAAARDAGIAALTAEVDTAARVLDAPAARLIARGTSRLVQLDEVETLFASNALVVDACRHTVRDARTT VSLARRPVLFVLARALGEAWPADVSRNALVAVAFRAKHADESHRARLRVEIGRLRAVLRPLANVIATPRGFALEPLGIRE TVVLARPVDDRHAAVLALLADGEAWSSSALALALGTSQRTVQRALDALAEADKVQALGRGRARRWMTPPLPGFATTLLLP APLPGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42911; Mature: 42911
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLITAAARALAAGDALGALNRVALRDDAPALALRGIAMAQLGDFERARTLVRAAARAF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GAKEAVARARCVVAEAEIALASRDLRWPTRALDAACATLDAHGDRANAAHARYLGVRRLL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LIGQLDDAERMLANLDPAPLPAASRAAHELIAAGIAMRRIRTHAARAALARARAAARDAG HHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IAALTAEVDTAARVLDAPAARLIARGTSRLVQLDEVETLFASNALVVDACRHTVRDARTT CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSLARRPVLFVLARALGEAWPADVSRNALVAVAFRAKHADESHRARLRVEIGRLRAVLRP HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHH LANVIATPRGFALEPLGIRETVVLARPVDDRHAAVLALLADGEAWSSSALALALGTSQRT HHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHH VQRALDALAEADKVQALGRGRARRWMTPPLPGFATTLLLPAPLPGD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEECCCCCCC >Mature Secondary Structure MDSLITAAARALAAGDALGALNRVALRDDAPALALRGIAMAQLGDFERARTLVRAAARAF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GAKEAVARARCVVAEAEIALASRDLRWPTRALDAACATLDAHGDRANAAHARYLGVRRLL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LIGQLDDAERMLANLDPAPLPAASRAAHELIAAGIAMRRIRTHAARAALARARAAARDAG HHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IAALTAEVDTAARVLDAPAARLIARGTSRLVQLDEVETLFASNALVVDACRHTVRDARTT CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSLARRPVLFVLARALGEAWPADVSRNALVAVAFRAKHADESHRARLRVEIGRLRAVLRP HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHH LANVIATPRGFALEPLGIRETVVLARPVDDRHAAVLALLADGEAWSSSALALALGTSQRT HHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHH VQRALDALAEADKVQALGRGRARRWMTPPLPGFATTLLLPAPLPGD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA