| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066764
Identifier: 78066764
GI number: 78066764
Start: 2348173
End: 2348838
Strand: Direct
Name: 78066764
Synonym: Bcep18194_A5295
Alternate gene names: NA
Gene position: 2348173-2348838 (Clockwise)
Preceding gene: 78066762
Following gene: 78066765
Centisome position: 63.57
GC content: 65.92
Gene sequence:
>666_bases ATGGAGTCCACCTTGAAAGACATCGCGCTCGTCGCATTCGACCGCTTCACAGACATCGACCTGTTCCTGATGTGGGACAT TCTCGGCCGCAACAACCGGGACTGGCGCGTCCGGATTCTGGGCGCACAACCGGTGCTGCATTCCGCCCATGGCCTGGCCA TCCCGACGCACGGTCCGCTCGCCGACGCCAATCACGCCGACGCTGTCCTCTTTTCGAGCGGCAAGGAAGGCGTCCCGGCC GCACTCGCCGATCCGGATTTCCTGCCGTCGTTCGATCTCGATCCCGAACGCCAGCTTGTCGGGTCGATCTGCGGCGGGGC CTTCATTCTCGAGCGGCTCGGGCTGCTGCCGCAGCGCCGCGCCACGACGCATCCCGACGCGCGGAAGGGTTTGCAGGCAC TCGAGCTGGACGTGCCGGAGCAGCCGCTGGTGTGCCACGGCAACGTCGCGACCGCGGGCGGGTGCCTTGCGTCGGTCTAT CTGACAGGATGGCTGGTGGAATCGCTGTTCGACGCGGCCAAGCGCCGCGAGACGCTGCTGCCCGTGCTGCCTGCCGGGCA ACGGGCGATTTACGAAGATCTGATCGAGTTCAGCATCAGGCAGGGTGCGGGACAAGCCACCGGTCCGATCCGGATGGTTG AAGGTGAAAACGGGCTTGCGGCGTGA
Upstream 100 bases:
>100_bases GTGCTCATCGTCATCGCCATACAGGCTGTGTATGGTGCGGCATGGACAGATAGGCTGCGGACTCTATCACGGCCGCCGCT TCCGCTGCGCGCCACTACGC
Downstream 100 bases:
>100_bases CGCGCGGACCCATGCGCGGCCGATAGTCGGCAGCCAGCACCCTGTTGCATCGTCGTGCGTGCTGCCGAGCCTGCGGCGGA CCGCGACGTATTCGCGGGCG
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: ThiJ/PfpI Family Protein; DJ-1/PfpI Family Protein; ThiJ/PfpI Domain Protein; Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; AraC Family Transcriptional Regulator
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MESTLKDIALVAFDRFTDIDLFLMWDILGRNNRDWRVRILGAQPVLHSAHGLAIPTHGPLADANHADAVLFSSGKEGVPA ALADPDFLPSFDLDPERQLVGSICGGAFILERLGLLPQRRATTHPDARKGLQALELDVPEQPLVCHGNVATAGGCLASVY LTGWLVESLFDAAKRRETLLPVLPAGQRAIYEDLIEFSIRQGAGQATGPIRMVEGENGLAA
Sequences:
>Translated_221_residues MESTLKDIALVAFDRFTDIDLFLMWDILGRNNRDWRVRILGAQPVLHSAHGLAIPTHGPLADANHADAVLFSSGKEGVPA ALADPDFLPSFDLDPERQLVGSICGGAFILERLGLLPQRRATTHPDARKGLQALELDVPEQPLVCHGNVATAGGCLASVY LTGWLVESLFDAAKRRETLLPVLPAGQRAIYEDLIEFSIRQGAGQATGPIRMVEGENGLAA >Mature_221_residues MESTLKDIALVAFDRFTDIDLFLMWDILGRNNRDWRVRILGAQPVLHSAHGLAIPTHGPLADANHADAVLFSSGKEGVPA ALADPDFLPSFDLDPERQLVGSICGGAFILERLGLLPQRRATTHPDARKGLQALELDVPEQPLVCHGNVATAGGCLASVY LTGWLVESLFDAAKRRETLLPVLPAGQRAIYEDLIEFSIRQGAGQATGPIRMVEGENGLAA
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23808; Mature: 23808
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTLKDIALVAFDRFTDIDLFLMWDILGRNNRDWRVRILGAQPVLHSAHGLAIPTHGPL CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCEECCCCCCC ADANHADAVLFSSGKEGVPAALADPDFLPSFDLDPERQLVGSICGGAFILERLGLLPQRR CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC ATTHPDARKGLQALELDVPEQPLVCHGNVATAGGCLASVYLTGWLVESLFDAAKRRETLL CCCCCHHHHCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVLPAGQRAIYEDLIEFSIRQGAGQATGPIRMVEGENGLAA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MESTLKDIALVAFDRFTDIDLFLMWDILGRNNRDWRVRILGAQPVLHSAHGLAIPTHGPL CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCEECCCCCCC ADANHADAVLFSSGKEGVPAALADPDFLPSFDLDPERQLVGSICGGAFILERLGLLPQRR CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC ATTHPDARKGLQALELDVPEQPLVCHGNVATAGGCLASVYLTGWLVESLFDAAKRRETLL CCCCCHHHHCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVLPAGQRAIYEDLIEFSIRQGAGQATGPIRMVEGENGLAA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA