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The map label for this gene is hycF [C]

Identifier: 78066757

GI number: 78066757

Start: 2343739

End: 2343984

Strand: Direct

Name: hycF [C]

Synonym: Bcep18194_A5288

Alternate gene names: 78066757

Gene position: 2343739-2343984 (Clockwise)

Preceding gene: 78066756

Following gene: 78066758

Centisome position: 63.45

GC content: 62.6

Gene sequence:

>246_bases
ATGTCCCATACCTCGCACGACATCTTCCAGCGCAGCAGCGCACCCGTCACGATCGACGAGACCCTGTGCATCGCCGACAA
GGGCTGCACCGTCTGCGTCGACGTGTGCCCGCTCGACCTGCTTGCGATCGACGTGTCCAAAGGCAAGGCCTATATGCAGT
TCGACGAATGCTGGTACTGCATGCCGTGCGAGCGCGATTGCCCGACCGGCGCGGTCAAGGTCGACATCCCTTACCTGCTG
CGCTGA

Upstream 100 bases:

>100_bases
CCGTACCTCGTGCCGCTTGCCGACGACGATCGCGCCGCCTACACGAATCTGCGCATCCGCGAACCGGCCGCGCTCGCGGC
CGCCCTTTGAGGAACCCGCC

Downstream 100 bases:

>100_bases
CCGCGCCCCTCAACGCCCTCTCCCGTCACTCATGACCGATTCCTCCTTCGCTGCCGCGTTGCCCCGCGCACACGCCCCCG
ACGAAGCCGCACTCGTCGCC

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: Ferredoxin 4Fe-4S; 4Fe-4S Ferredoxin; Ferredoxin-Like Protein

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSHTSHDIFQRSSAPVTIDETLCIADKGCTVCVDVCPLDLLAIDVSKGKAYMQFDECWYCMPCERDCPTGAVKVDIPYLL
R

Sequences:

>Translated_81_residues
MSHTSHDIFQRSSAPVTIDETLCIADKGCTVCVDVCPLDLLAIDVSKGKAYMQFDECWYCMPCERDCPTGAVKVDIPYLL
R
>Mature_80_residues
SHTSHDIFQRSSAPVTIDETLCIADKGCTVCVDVCPLDLLAIDVSKGKAYMQFDECWYCMPCERDCPTGAVKVDIPYLLR

Specific function: Probable Electron Transfer Protein For Hydrogenase 3 [C]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9034; Mature: 8902

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
13.6 %Cys+Met (Translated Protein)
10.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTSHDIFQRSSAPVTIDETLCIADKGCTVCVDVCPLDLLAIDVSKGKAYMQFDECWYC
CCCCCCCHHHCCCCCEEECCEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEECCCEEE
MPCERDCPTGAVKVDIPYLLR
CCCCCCCCCCEEEECCCEECC
>Mature Secondary Structure 
SHTSHDIFQRSSAPVTIDETLCIADKGCTVCVDVCPLDLLAIDVSKGKAYMQFDECWYC
CCCCCCHHHCCCCCEEECCEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEECCCEEE
MPCERDCPTGAVKVDIPYLLR
CCCCCCCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA