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The map label for this gene is yvoA [H]

Identifier: 78066755

GI number: 78066755

Start: 2341222

End: 2341992

Strand: Direct

Name: yvoA [H]

Synonym: Bcep18194_A5286

Alternate gene names: 78066755

Gene position: 2341222-2341992 (Clockwise)

Preceding gene: 78066743

Following gene: 78066756

Centisome position: 63.38

GC content: 64.59

Gene sequence:

>771_bases
ATGACCTCCCCCAACATCGTGCCGCTGTCGGCGGCCCCACTCTACGTGCAGATCAAGGACACGCTGCGCGCGCGCATTCT
CGACGGCACCCATGCGCCGCACAGCCGGATGCCGTCCGAGCACGAACTCTGCGCGATGTTCGACGTCAGTCGCATCACGG
TGCGCCAGGCGCTCGGCGATCTGCAGAAGGAAGGACTGCTGTTCAAGCTGCACGGCAAGGGCACCTTCGTGTCGAAGCCG
AAGGCATTCCAGAACGTGACGTCGCTGCAGGGCTTCGCCGAGGCGATGTCGTCGATGGGCTACGAGATCGTCAACCAGGT
GCGCAGCTTCCGCACCGTCAAGGCCGATCGCCATCTCGCGACGAAGCTGAACGTGCCCGAAGGTGCGCCGCTCGTCGAAA
TTCATCGCGTGCGGCTGCTGAATCGCGAGCCCGTGTCGCTCGAACAGACGTGGGTGCCCGAAGCCGTCGGCAAGCGTCTC
GCGGGCGCCGATCTCGCGACCCGCGACATTTTCCTGGTTCTGGAAAACGACTGCGGCATCCCGCTCGGTCATGCCGATGT
GTCGATCGACGCGATCCTCGCCGACGACGAAATCGTCGATGCGCTGCACGTCGAGGAAAGCAGCCCCGTGCTGCGCATCG
AGCGCCTCACGCACGACGCGTCGGGCGCACCGATCGACTACGAATACCTCTACTTCCGCGGCGACGCCTTCCAGTACCGG
CTGCGCATCGACCGGCAGAAGCCGCGCAAACCTGCAAGGAAACAGCGATGA

Upstream 100 bases:

>100_bases
GCGCTTTTCCGGAATCGGAAAGTCGAAATCAGAAATAGTTGGTTGGGGCGTGCAATCGCGCTCACTACACTCGAGCGATC
TTGTCATAACAAGTTGATCG

Downstream 100 bases:

>100_bases
CTACCCATGTGCTCGAATACGACATCGTCGTGGTCGGCGGCGGCACCGCCGGCCCGATGGCGGCGATCAAGGCAAAGGAG
CGCGATCCGTCCCTGCGCGT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTSPNIVPLSAAPLYVQIKDTLRARILDGTHAPHSRMPSEHELCAMFDVSRITVRQALGDLQKEGLLFKLHGKGTFVSKP
KAFQNVTSLQGFAEAMSSMGYEIVNQVRSFRTVKADRHLATKLNVPEGAPLVEIHRVRLLNREPVSLEQTWVPEAVGKRL
AGADLATRDIFLVLENDCGIPLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
LRIDRQKPRKPARKQR

Sequences:

>Translated_256_residues
MTSPNIVPLSAAPLYVQIKDTLRARILDGTHAPHSRMPSEHELCAMFDVSRITVRQALGDLQKEGLLFKLHGKGTFVSKP
KAFQNVTSLQGFAEAMSSMGYEIVNQVRSFRTVKADRHLATKLNVPEGAPLVEIHRVRLLNREPVSLEQTWVPEAVGKRL
AGADLATRDIFLVLENDCGIPLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
LRIDRQKPRKPARKQR
>Mature_255_residues
TSPNIVPLSAAPLYVQIKDTLRARILDGTHAPHSRMPSEHELCAMFDVSRITVRQALGDLQKEGLLFKLHGKGTFVSKPK
AFQNVTSLQGFAEAMSSMGYEIVNQVRSFRTVKADRHLATKLNVPEGAPLVEIHRVRLLNREPVSLEQTWVPEAVGKRLA
GADLATRDIFLVLENDCGIPLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYRL
RIDRQKPRKPARKQR

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=237, Percent_Identity=28.2700421940928, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786950, Length=237, Percent_Identity=26.5822784810127, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082252, Length=219, Percent_Identity=26.9406392694064, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788418, Length=234, Percent_Identity=24.7863247863248, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28682; Mature: 28551

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPNIVPLSAAPLYVQIKDTLRARILDGTHAPHSRMPSEHELCAMFDVSRITVRQALGD
CCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHH
LQKEGLLFKLHGKGTFVSKPKAFQNVTSLQGFAEAMSSMGYEIVNQVRSFRTVKADRHLA
HHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHE
TKLNVPEGAPLVEIHRVRLLNREPVSLEQTWVPEAVGKRLAGADLATRDIFLVLENDCGI
EECCCCCCCCHHEEEEEHHCCCCCCCCHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCC
PLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
EECCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCEEEEE
LRIDRQKPRKPARKQR
EEECCCCCCCCCCCCC
>Mature Secondary Structure 
TSPNIVPLSAAPLYVQIKDTLRARILDGTHAPHSRMPSEHELCAMFDVSRITVRQALGD
CCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHH
LQKEGLLFKLHGKGTFVSKPKAFQNVTSLQGFAEAMSSMGYEIVNQVRSFRTVKADRHLA
HHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHE
TKLNVPEGAPLVEIHRVRLLNREPVSLEQTWVPEAVGKRLAGADLATRDIFLVLENDCGI
EECCCCCCCCHHEEEEEHHCCCCCCCCHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCC
PLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
EECCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCEEEEE
LRIDRQKPRKPARKQR
EEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]