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The map label for this gene is nolA [H]

Identifier: 78066507

GI number: 78066507

Start: 2075935

End: 2076963

Strand: Direct

Name: nolA [H]

Synonym: Bcep18194_A5038

Alternate gene names: 78066507

Gene position: 2075935-2076963 (Clockwise)

Preceding gene: 78066506

Following gene: 78066512

Centisome position: 56.2

GC content: 65.5

Gene sequence:

>1029_bases
ATGCGACTGAAAGTGGGAGAACTGGCGAAACGCAGCGGGCTGACCGTCCGCACGCTTCATCACTATCACGCGATCGGTTT
GCTGACGCCTTCGGCGCGCGCCGACAACGGCTACCGGCTGTACGACCGCCACGACATCGCCCGGCTCCACCAGATCCAGG
CGCTGCGTCGCTTCGGCCTGTCGCTCACCGAAATCGGCGACCACCTGAACCAGCCCGACACCCCGCTCGTCGAGATCGTC
GCGAAGCAGATCGCGCTGCTCGACCGTCAGCTTGCGCAGACCGCGCAGCTGCGCGAGCGGCTCGTCAGCCTGCATGCGCA
GCTCGCCGCGGGCACGGAGCCGGAGCTGGCCGATTGGCTCACCACACTGGAGTTGATGACCGTGTACGACAAATATTTTT
CCGAGGAAGAACTCGCGCGCCTGCCGATGTACCAGAAGAGCCAGGCGGGCGACGCCGAATGGATCGCACTCGTCGACGAG
GTGCGTGCGCTGCACGACGCGGGCGTGCCCGCCGAGGACGAACGCCCCCGTGCGCTCGCCAGCCGCTGGATGACGCTGCT
CGTGCGCGACACGAACAACGACCCGCGGCTGCTGGCGAAGCTGAACCTGATGCACGAACACGAACCGGCGATGCAGTCGA
AGATCGGCATTTCGACCGCGCTGCGCGACTATGTGCTGCGCGCGTCGTCGGAAACCAAGATGCGGATCTTCGAGAAGTAT
CTGGCGCCGGACGAGATCCGCTTCATGCGGGCCCACTACGGTGAAAGCGCAATGGAATGGCCGCAACTGATGGGCGACGT
GCGCGACGCGATCGATGCGGGCGCCAGACCGGATTCACCGGAAGGCCGCGCGCTCGCGCAACGCTGGCTCACGCTGTTCT
GCCGCTATGCGGGCACCGATCCGGCCACGCATGCGAAATTCCGCCACGCGATGATGAACGAGCCGTCACTGACGAAGGAT
TCGTGGATCGACGACACGTTGATCGGCTTCGTGCGGGAAGCGATGGCGCAGCTTGCGCCTGCGCGCTGA

Upstream 100 bases:

>100_bases
CGTGCCGAATCTGCGTGCGCACCCGATTTCCGATCTTCCGCTTGACCCTCACGTAGCGTAACGTTCGAGACTCCAGTGTG
CGCACCGAACGGAGGAACGA

Downstream 100 bases:

>100_bases
GCAGGTTGAGTGCGTTGATTGCTTGACCGTGCGGGCGGCAGGCGGATTTCCCGTGTGCCGCCCGTTTCGCCATTTGCAGC
CGGTGTCGCGAACCACATCC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRLKVGELAKRSGLTVRTLHHYHAIGLLTPSARADNGYRLYDRHDIARLHQIQALRRFGLSLTEIGDHLNQPDTPLVEIV
AKQIALLDRQLAQTAQLRERLVSLHAQLAAGTEPELADWLTTLELMTVYDKYFSEEELARLPMYQKSQAGDAEWIALVDE
VRALHDAGVPAEDERPRALASRWMTLLVRDTNNDPRLLAKLNLMHEHEPAMQSKIGISTALRDYVLRASSETKMRIFEKY
LAPDEIRFMRAHYGESAMEWPQLMGDVRDAIDAGARPDSPEGRALAQRWLTLFCRYAGTDPATHAKFRHAMMNEPSLTKD
SWIDDTLIGFVREAMAQLAPAR

Sequences:

>Translated_342_residues
MRLKVGELAKRSGLTVRTLHHYHAIGLLTPSARADNGYRLYDRHDIARLHQIQALRRFGLSLTEIGDHLNQPDTPLVEIV
AKQIALLDRQLAQTAQLRERLVSLHAQLAAGTEPELADWLTTLELMTVYDKYFSEEELARLPMYQKSQAGDAEWIALVDE
VRALHDAGVPAEDERPRALASRWMTLLVRDTNNDPRLLAKLNLMHEHEPAMQSKIGISTALRDYVLRASSETKMRIFEKY
LAPDEIRFMRAHYGESAMEWPQLMGDVRDAIDAGARPDSPEGRALAQRWLTLFCRYAGTDPATHAKFRHAMMNEPSLTKD
SWIDDTLIGFVREAMAQLAPAR
>Mature_342_residues
MRLKVGELAKRSGLTVRTLHHYHAIGLLTPSARADNGYRLYDRHDIARLHQIQALRRFGLSLTEIGDHLNQPDTPLVEIV
AKQIALLDRQLAQTAQLRERLVSLHAQLAAGTEPELADWLTTLELMTVYDKYFSEEELARLPMYQKSQAGDAEWIALVDE
VRALHDAGVPAEDERPRALASRWMTLLVRDTNNDPRLLAKLNLMHEHEPAMQSKIGISTALRDYVLRASSETKMRIFEKY
LAPDEIRFMRAHYGESAMEWPQLMGDVRDAIDAGARPDSPEGRALAQRWLTLFCRYAGTDPATHAKFRHAMMNEPSLTKD
SWIDDTLIGFVREAMAQLAPAR

Specific function: Involved in genotype-specific nodulation of soybeans [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 38852; Mature: 38852

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKVGELAKRSGLTVRTLHHYHAIGLLTPSARADNGYRLYDRHDIARLHQIQALRRFGL
CCCCHHHHHHHCCCEEEHHHHHHHHHEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCC
SLTEIGDHLNQPDTPLVEIVAKQIALLDRQLAQTAQLRERLVSLHAQLAAGTEPELADWL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TTLELMTVYDKYFSEEELARLPMYQKSQAGDAEWIALVDEVRALHDAGVPAEDERPRALA
HHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SRWMTLLVRDTNNDPRLLAKLNLMHEHEPAMQSKIGISTALRDYVLRASSETKMRIFEKY
HHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LAPDEIRFMRAHYGESAMEWPQLMGDVRDAIDAGARPDSPEGRALAQRWLTLFCRYAGTD
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PATHAKFRHAMMNEPSLTKDSWIDDTLIGFVREAMAQLAPAR
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLKVGELAKRSGLTVRTLHHYHAIGLLTPSARADNGYRLYDRHDIARLHQIQALRRFGL
CCCCHHHHHHHCCCEEEHHHHHHHHHEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCC
SLTEIGDHLNQPDTPLVEIVAKQIALLDRQLAQTAQLRERLVSLHAQLAAGTEPELADWL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TTLELMTVYDKYFSEEELARLPMYQKSQAGDAEWIALVDEVRALHDAGVPAEDERPRALA
HHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SRWMTLLVRDTNNDPRLLAKLNLMHEHEPAMQSKIGISTALRDYVLRASSETKMRIFEKY
HHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LAPDEIRFMRAHYGESAMEWPQLMGDVRDAIDAGARPDSPEGRALAQRWLTLFCRYAGTD
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PATHAKFRHAMMNEPSLTKDSWIDDTLIGFVREAMAQLAPAR
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631662 [H]