Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78066478

Identifier: 78066478

GI number: 78066478

Start: 2046656

End: 2047141

Strand: Reverse

Name: 78066478

Synonym: Bcep18194_A5009

Alternate gene names: NA

Gene position: 2047141-2046656 (Counterclockwise)

Preceding gene: 78066479

Following gene: 78066477

Centisome position: 55.42

GC content: 61.73

Gene sequence:

>486_bases
ATGCCTGTGTCAGCCACCCTGCAGGATTGCCTGCGTCAGAAGTCATCGCGGTACGAAGTGGTGTACCACCCCTATAGCCA
TACGAGCATGGAGACGGCCGCCGCCGCGCATATTCCCGGCGATCGCCTCGCGAAAACCGTGCTCCTCGAAGACGACGAAG
GCTACGTCGCCGCCGTATTGCCGACCACGTACGCCGTGCGCCTGTCGGATCTCTGGGTGAAGACGGGACGCCATCTCGTG
CTCGCCCGGGAGGTCGAGCTGCGCGAGTTGTTCAAGGATTGCGACATGGGCGCGTTGCCGCCGGTGTGCATGGCGTACGG
GATGAAGACGTTTCTCGAGGAACGTCTCGCGCAGCAGCCGGAAGTCTATTTCGAGGCCGGCGATCACGAGGCGCTGATCC
ACATGATGCAGGATGAATTCCTGATGCTGATGGAGACGGCCGAACGCGCGCATTTCTCGCACAAGATGCAGGGCATGCAC
TCCTGA

Upstream 100 bases:

>100_bases
GTGCGGGAGCGGTGAGGATTTCCATCCGCCGGAATGCGACCTATGCTGAACGAATCCGGTGCGAACGCCGTTCGCCCGTT
TCGCCCAGACGAGGTGTGCC

Downstream 100 bases:

>100_bases
CGCGCGTGGTGCGTCGGCGCTGGCCGGTGCCCGTGAGACACGGTTGTGTGTCGCGGCAGTGGGTATGGTGGCGACAGTTA
ATTCGATGTGCGAAATTATC

Product: YbaK/prolyl-tRNA synthetase associated region

Products: NA

Alternate protein names: YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; YbaK / Prolyl-TRNA Synthetases Associated Domain Protein; YbaK/Aminoacyl-TRNA Synthetase Associated Region

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDDEGYVAAVLPTTYAVRLSDLWVKTGRHLV
LAREVELRELFKDCDMGALPPVCMAYGMKTFLEERLAQQPEVYFEAGDHEALIHMMQDEFLMLMETAERAHFSHKMQGMH
S

Sequences:

>Translated_161_residues
MPVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDDEGYVAAVLPTTYAVRLSDLWVKTGRHLV
LAREVELRELFKDCDMGALPPVCMAYGMKTFLEERLAQQPEVYFEAGDHEALIHMMQDEFLMLMETAERAHFSHKMQGMH
S
>Mature_160_residues
PVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDDEGYVAAVLPTTYAVRLSDLWVKTGRHLVL
AREVELRELFKDCDMGALPPVCMAYGMKTFLEERLAQQPEVYFEAGDHEALIHMMQDEFLMLMETAERAHFSHKMQGMHS

Specific function: Unknown

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18332; Mature: 18201

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDDEGYVAAVL
CCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHEEEEECCCCEEEEEE
PTTYAVRLSDLWVKTGRHLVLAREVELRELFKDCDMGALPPVCMAYGMKTFLEERLAQQP
CCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
EVYFEAGDHEALIHMMQDEFLMLMETAERAHFSHKMQGMHS
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDDEGYVAAVL
CCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHEEEEECCCCEEEEEE
PTTYAVRLSDLWVKTGRHLVLAREVELRELFKDCDMGALPPVCMAYGMKTFLEERLAQQP
CCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
EVYFEAGDHEALIHMMQDEFLMLMETAERAHFSHKMQGMHS
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA