| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066439
Identifier: 78066439
GI number: 78066439
Start: 1996993
End: 1997430
Strand: Direct
Name: 78066439
Synonym: Bcep18194_A4970
Alternate gene names: NA
Gene position: 1996993-1997430 (Clockwise)
Preceding gene: 78066437
Following gene: 78066441
Centisome position: 54.06
GC content: 60.5
Gene sequence:
>438_bases TTGCCGAGACTCATCGCCATGAACGAATCCGATCGCTGGGAGCAGATGCTTACACTGCTCATCTCGCCGACCAAAGTAGA CCACGGGGAGCTATCGATTGGTCGAAATACCGATCGCGCTAGCCGCCGTAACTTGGCGTCGATCCCGTCGAGCAGCAGCA CATGTTGCCCAACTCCGATCGTCGCGGTCGAGCGTCAGACCGGCTCGGAGGTACTTGTATCGTGGCACGACCCGACACGC TGCAGATATGACGAGCAGCGTTGGACGAGCGCGAAGGCCCGCGGCCGTGGTACCTGTGCGCTGAGTGGACGCCTGATCAG AATTGGCGACGAGATCTACAAGCCGCTGTGGCGGGGCGCAAAGCCTCCGGCGAATGCGTCGGCGATGATCATCGCGACCG AACTGGAGCGGTTCATCGATCGGTTACCTAGTCCTTGA
Upstream 100 bases:
>100_bases TTCAGATCGCCCAATGATGTATGTCGGCGTCGCTCCAGGCCGTGTGGGTGCGACGACAGCAACGTGAACTGGCGCACATG CGTGCCGGACCTCGCGCCAA
Downstream 100 bases:
>100_bases GGGACACCTTGCATTCGGCGGTTAGCAGGCGGCGCAGGATAGTGTTTTTTTGAAGATCTCGAGGGGGTAGGAGAATATCC GGCGTTTCTTCGATACGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPRLIAMNESDRWEQMLTLLISPTKVDHGELSIGRNTDRASRRNLASIPSSSSTCCPTPIVAVERQTGSEVLVSWHDPTR CRYDEQRWTSAKARGRGTCALSGRLIRIGDEIYKPLWRGAKPPANASAMIIATELERFIDRLPSP
Sequences:
>Translated_145_residues MPRLIAMNESDRWEQMLTLLISPTKVDHGELSIGRNTDRASRRNLASIPSSSSTCCPTPIVAVERQTGSEVLVSWHDPTR CRYDEQRWTSAKARGRGTCALSGRLIRIGDEIYKPLWRGAKPPANASAMIIATELERFIDRLPSP >Mature_144_residues PRLIAMNESDRWEQMLTLLISPTKVDHGELSIGRNTDRASRRNLASIPSSSSTCCPTPIVAVERQTGSEVLVSWHDPTRC RYDEQRWTSAKARGRGTCALSGRLIRIGDEIYKPLWRGAKPPANASAMIIATELERFIDRLPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16218; Mature: 16087
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLIAMNESDRWEQMLTLLISPTKVDHGELSIGRNTDRASRRNLASIPSSSSTCCPTPI CCCEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHCCHHCCCCCCCCCCCCCE VAVERQTGSEVLVSWHDPTRCRYDEQRWTSAKARGRGTCALSGRLIRIGDEIYKPLWRGA EEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEECCEEEEECHHHHHHHHCCC KPPANASAMIIATELERFIDRLPSP CCCCCCCEEEEHHHHHHHHHHCCCC >Mature Secondary Structure PRLIAMNESDRWEQMLTLLISPTKVDHGELSIGRNTDRASRRNLASIPSSSSTCCPTPI CCEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHCCHHCCCCCCCCCCCCCE VAVERQTGSEVLVSWHDPTRCRYDEQRWTSAKARGRGTCALSGRLIRIGDEIYKPLWRGA EEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEECCEEEEECHHHHHHHHCCC KPPANASAMIIATELERFIDRLPSP CCCCCCCEEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA