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The map label for this gene is yjcH [H]

Identifier: 78066430

GI number: 78066430

Start: 1986707

End: 1987069

Strand: Reverse

Name: yjcH [H]

Synonym: Bcep18194_A4961

Alternate gene names: 78066430

Gene position: 1987069-1986707 (Counterclockwise)

Preceding gene: 78066431

Following gene: 78066429

Centisome position: 53.79

GC content: 57.85

Gene sequence:

>363_bases
GTGGATCACCCAATTTCGGCCACCGAAGGCGTTGCCCTGAACACAGAGGCGTCCGCTACGGTAACGCAGCATCCGTTGCT
GAGCGACGTGCGCTTTCGTGACCTGGTCAAACGGCGCCGCACTTTTGCCTGGTCGATGACGATCGCGATGCTCGCGATCT
ATTTCGCGTTCATCCTTACTCTCGCGTTCTTCCCGCAGTTGCTCGGACAACAGATCGTTCAAGGCCAACCGACTACGTGG
GGTATCCCCGTCGGTTTCGGCATGTTCGCCCTGACATTTGCACTGGTCGCTGTATACGTGTACCGGGCCAATTCCGTCTA
TGACGCGATCGTCGCGTCGATCCGTCAAGGGGACGATCAATGA

Upstream 100 bases:

>100_bases
GGAAACCGCCGTTCCACCGCACTTCTGATCGTGAACGGGAGTGCCTGTCGTCGGTCGCTCCCGCCTAGCGTTACAACAGA
CACAACACGAAGGAGACATC

Downstream 100 bases:

>100_bases
AGCGTGTACTACTCGCGTCGCTCATCGCGATCGAAGCATTGCCAGCAGTCGCGGCCCAACCTGGATCGCTCACGCACGGC
CATAATCCGGTCGCAATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MDHPISATEGVALNTEASATVTQHPLLSDVRFRDLVKRRRTFAWSMTIAMLAIYFAFILTLAFFPQLLGQQIVQGQPTTW
GIPVGFGMFALTFALVAVYVYRANSVYDAIVASIRQGDDQ

Sequences:

>Translated_120_residues
MDHPISATEGVALNTEASATVTQHPLLSDVRFRDLVKRRRTFAWSMTIAMLAIYFAFILTLAFFPQLLGQQIVQGQPTTW
GIPVGFGMFALTFALVAVYVYRANSVYDAIVASIRQGDDQ
>Mature_120_residues
MDHPISATEGVALNTEASATVTQHPLLSDVRFRDLVKRRRTFAWSMTIAMLAIYFAFILTLAFFPQLLGQQIVQGQPTTW
GIPVGFGMFALTFALVAVYVYRANSVYDAIVASIRQGDDQ

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=80, Percent_Identity=41.25, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 13316; Mature: 13316

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHPISATEGVALNTEASATVTQHPLLSDVRFRDLVKRRRTFAWSMTIAMLAIYFAFILT
CCCCCCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFFPQLLGQQIVQGQPTTWGIPVGFGMFALTFALVAVYVYRANSVYDAIVASIRQGDDQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDHPISATEGVALNTEASATVTQHPLLSDVRFRDLVKRRRTFAWSMTIAMLAIYFAFILT
CCCCCCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFFPQLLGQQIVQGQPTTWGIPVGFGMFALTFALVAVYVYRANSVYDAIVASIRQGDDQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]