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The map label for this gene is yagR [C]

Identifier: 78066425

GI number: 78066425

Start: 1979409

End: 1981682

Strand: Reverse

Name: yagR [C]

Synonym: Bcep18194_A4956

Alternate gene names: 78066425

Gene position: 1981682-1979409 (Counterclockwise)

Preceding gene: 78066426

Following gene: 78066424

Centisome position: 53.64

GC content: 60.99

Gene sequence:

>2274_bases
ATGAACGACCTCGAGAACCAACACGACGACATAGACGAAGGTCGCCGGAATTTCATCGTCTCAAGTGCGCTCTTCGTCGC
ATTCAGCCTTGCTCCGGCCTCTCGCGCGGTCGCGCAGGCCGTGATTGCCGACGAAGGCGCCGCCGTCCACGTTTCGAAGG
CTACCGAGACGCTTGCAGGCAGCCTGAAAACCAACCCGCTGCTGGATGCATGGATCAAGATTACGCCGGAAGGCAAAGTT
ACCGTGTTTACAGGCAAGGTCGAGCTCGGCACCGGCGTGCGCACTGCTCTACTACAGATCGCCGCCGAAGAACTGGACAT
GCGCCCGTCGCTGATCACTTTCCTCACCGCCGATACCGGTGCGTCCCCCGACGAAGGATTGACGGCAGGCAGCCACACGA
TCGCCGACAGCGGTAGCGCATTGCTGAACGCCGCCGCTCAAGTGCGCGCACTACTGATCGATGGCGCCGCGAAACATCTC
GGTGTCGATCCTCACGCACTAACGACCAGCGACGGTTCGATCAAGGCCCCCGACGGGCGCACGATGAGCTACGGCAACGC
GGTACGGCTCGTCAATCTTCATCGCGCAGCCACGCCAGCGTCGCCGCTCAGGGATCCCGCAACGTTCAAGGTAATCGGTG
AATCGCTGCCTCGGGTCGACATTCCAAACAAGGTCACGGGCGGTGTCAGCTACGTACAGGACATAGAGTTACCCGGCATG
CTGCACGCACGTGTCGTGATGCCGCCCGTCTATGACTCGAAGTTGCAGTCTTTCGACGAAGACGCAATTCTGAAGATGCC
CGGGATCGTACGAATCGTACGCAACGGCAGCATGCTCGCAGTCGTCGCGCGCGGAGAATGGCAGGCCGTCACCGCCCAGC
GTGCGCTTGCGAACGGTTGTCGCTGGTCGACCGGCCGATCGCTGCCGGATCGCAACACGGTTCATGAAGAACTGAAGCGC
ATCTCGACACAACGCATTGAAATCGCCAATACGCACACAGCGACCGCGCCGGCCACTAAAACGCTGACTGCAACCTTCCT
GAAGAACTACCTTTTGCACGGCTCGATAGGACCGTCCTGCTCAGTCGCTCACCTGGAGAACGGTGTCCTGACCGTCTGGA
CACACTCGCAGGGTGTTTATCCGCTGCGCGACGGGCTCGCCGAAATGCTGTCGATGCCTAAACAAAGCATCCGCTGCGTT
CATGTAGAGGGTTCGGGTTGCTATGGACACAATGGGGCGGACGACGCCGCCGCACACGCAGCGCTCATCGCGGTCGCGAT
GCCGGATCAGCCGGTCAGGGTTCAATGGATGCGTGAGCAGGAGCACGCGTGGGATCACTTCACACCCGCCATGGTCACCG
AAATCAGTGCGTCTCTCGACGCAAGCGGGCATATCGTGGACTGGAAGTACGCCCTGTGGAGCAGCTCGCATAACGAACGG
ATCGTCAACGCCGGCCGACTGCTGCCGGCGCGAATGCTGGAGCCACCGTTTGTGTCTGCACCATCGACACCGATGCTGCA
GCCGGAGGGCGGCGGCGATCGCAACGCGATCCCGCTTTACGCCTTTCCAAACATGCATGTCGTCAACAACTTCTCGCCGA
CGATGCCACTGCAGACGTCGGCGATGCGATCGCTTGGCGCACACATGAACGTGCTGTCAATCGAAAGCTTCATGGACGAA
CTTGCACACACGGCGGGCGTCGATCCCGTCGAATTCCGCTTACGCCACATGCAGGATCCACGCGCGCGCCAAGTGATTGA
ACTCGCTGCGACACGCTTCGGCTGGCCTCGACCACCACGAGCTCGTAATCGAGGCGTCGGTTTCGCCTTTGGGAAGTATA
AGAATCTGATGGCCTATGTCGCGATAGCGGTCGAAATCACGATCGTTCCGGAAACGGGCCAGGTGATCCTCGAGCGCGCT
GAAGCAGCAGTTGACGCGGGACAGATCGTCACGCCGGATGGCATCCGCAATCAGATCGAAGGCGGCATCATCCAGGCGGC
AAGCTGGACGTTGTACGAGGAACTGAAGTACGACACGCAGCGGGTTCGCAGCTTCGACTGGAGTAGTTACCCGATCCTGC
GCTTTTCGGCGGCACCGCGCAGCTTGAACGTTCACCTGATCAACCGCCCGGGTGCGCCATTCCTCGGCGCGGCAGAGGCA
TCGATGGGCCCGACCGCCGGTGCGCTTGCAAATGCGATCTTCGATGCGACCGGCCAGCGCCTGCGCGAAATGCCGTTCGC
TGGAGAACGGCTCAGAAGGCGTATCGACGCGTAG

Upstream 100 bases:

>100_bases
GCGGAACCCACATGCGTATCCTGGCGGCCGTGCGTCAGGTCGCGGGCTTACAGCAACCGGAAAACGCTTCCGAACCCGTG
ACGGTCAGCAAGGCCCTCTG

Downstream 100 bases:

>100_bases
GCGCGCACGGGTGCTGCCGACTATCAGGGTGGAGAATCGCGACTGATGGATACACTTCTTTCGATGCGCATATTCACACG
CATCGTCGAAACAGGCAGCT

Product: putative aldehyde dehydrogenase

Products: NA

Alternate protein names: ALDH [H]

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MNDLENQHDDIDEGRRNFIVSSALFVAFSLAPASRAVAQAVIADEGAAVHVSKATETLAGSLKTNPLLDAWIKITPEGKV
TVFTGKVELGTGVRTALLQIAAEELDMRPSLITFLTADTGASPDEGLTAGSHTIADSGSALLNAAAQVRALLIDGAAKHL
GVDPHALTTSDGSIKAPDGRTMSYGNAVRLVNLHRAATPASPLRDPATFKVIGESLPRVDIPNKVTGGVSYVQDIELPGM
LHARVVMPPVYDSKLQSFDEDAILKMPGIVRIVRNGSMLAVVARGEWQAVTAQRALANGCRWSTGRSLPDRNTVHEELKR
ISTQRIEIANTHTATAPATKTLTATFLKNYLLHGSIGPSCSVAHLENGVLTVWTHSQGVYPLRDGLAEMLSMPKQSIRCV
HVEGSGCYGHNGADDAAAHAALIAVAMPDQPVRVQWMREQEHAWDHFTPAMVTEISASLDASGHIVDWKYALWSSSHNER
IVNAGRLLPARMLEPPFVSAPSTPMLQPEGGGDRNAIPLYAFPNMHVVNNFSPTMPLQTSAMRSLGAHMNVLSIESFMDE
LAHTAGVDPVEFRLRHMQDPRARQVIELAATRFGWPRPPRARNRGVGFAFGKYKNLMAYVAIAVEITIVPETGQVILERA
EAAVDAGQIVTPDGIRNQIEGGIIQAASWTLYEELKYDTQRVRSFDWSSYPILRFSAAPRSLNVHLINRPGAPFLGAAEA
SMGPTAGALANAIFDATGQRLREMPFAGERLRRRIDA

Sequences:

>Translated_757_residues
MNDLENQHDDIDEGRRNFIVSSALFVAFSLAPASRAVAQAVIADEGAAVHVSKATETLAGSLKTNPLLDAWIKITPEGKV
TVFTGKVELGTGVRTALLQIAAEELDMRPSLITFLTADTGASPDEGLTAGSHTIADSGSALLNAAAQVRALLIDGAAKHL
GVDPHALTTSDGSIKAPDGRTMSYGNAVRLVNLHRAATPASPLRDPATFKVIGESLPRVDIPNKVTGGVSYVQDIELPGM
LHARVVMPPVYDSKLQSFDEDAILKMPGIVRIVRNGSMLAVVARGEWQAVTAQRALANGCRWSTGRSLPDRNTVHEELKR
ISTQRIEIANTHTATAPATKTLTATFLKNYLLHGSIGPSCSVAHLENGVLTVWTHSQGVYPLRDGLAEMLSMPKQSIRCV
HVEGSGCYGHNGADDAAAHAALIAVAMPDQPVRVQWMREQEHAWDHFTPAMVTEISASLDASGHIVDWKYALWSSSHNER
IVNAGRLLPARMLEPPFVSAPSTPMLQPEGGGDRNAIPLYAFPNMHVVNNFSPTMPLQTSAMRSLGAHMNVLSIESFMDE
LAHTAGVDPVEFRLRHMQDPRARQVIELAATRFGWPRPPRARNRGVGFAFGKYKNLMAYVAIAVEITIVPETGQVILERA
EAAVDAGQIVTPDGIRNQIEGGIIQAASWTLYEELKYDTQRVRSFDWSSYPILRFSAAPRSLNVHLINRPGAPFLGAAEA
SMGPTAGALANAIFDATGQRLREMPFAGERLRRRIDA
>Mature_757_residues
MNDLENQHDDIDEGRRNFIVSSALFVAFSLAPASRAVAQAVIADEGAAVHVSKATETLAGSLKTNPLLDAWIKITPEGKV
TVFTGKVELGTGVRTALLQIAAEELDMRPSLITFLTADTGASPDEGLTAGSHTIADSGSALLNAAAQVRALLIDGAAKHL
GVDPHALTTSDGSIKAPDGRTMSYGNAVRLVNLHRAATPASPLRDPATFKVIGESLPRVDIPNKVTGGVSYVQDIELPGM
LHARVVMPPVYDSKLQSFDEDAILKMPGIVRIVRNGSMLAVVARGEWQAVTAQRALANGCRWSTGRSLPDRNTVHEELKR
ISTQRIEIANTHTATAPATKTLTATFLKNYLLHGSIGPSCSVAHLENGVLTVWTHSQGVYPLRDGLAEMLSMPKQSIRCV
HVEGSGCYGHNGADDAAAHAALIAVAMPDQPVRVQWMREQEHAWDHFTPAMVTEISASLDASGHIVDWKYALWSSSHNER
IVNAGRLLPARMLEPPFVSAPSTPMLQPEGGGDRNAIPLYAFPNMHVVNNFSPTMPLQTSAMRSLGAHMNVLSIESFMDE
LAHTAGVDPVEFRLRHMQDPRARQVIELAATRFGWPRPPRARNRGVGFAFGKYKNLMAYVAIAVEITIVPETGQVILERA
EAAVDAGQIVTPDGIRNQIEGGIIQAASWTLYEELKYDTQRVRSFDWSSYPILRFSAAPRSLNVHLINRPGAPFLGAAEA
SMGPTAGALANAIFDATGQRLREMPFAGERLRRRIDA

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786478, Length=458, Percent_Identity=25.1091703056769, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.2.99.3 [H]

Molecular weight: Translated: 81773; Mature: 81773

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLENQHDDIDEGRRNFIVSSALFVAFSLAPASRAVAQAVIADEGAAVHVSKATETLAG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHC
SLKTNPLLDAWIKITPEGKVTVFTGKVELGTGVRTALLQIAAEELDMRPSLITFLTADTG
CCCCCCCEEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
ASPDEGLTAGSHTIADSGSALLNAAAQVRALLIDGAAKHLGVDPHALTTSDGSIKAPDGR
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCEECCCCC
TMSYGNAVRLVNLHRAATPASPLRDPATFKVIGESLPRVDIPNKVTGGVSYVQDIELPGM
EECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCC
LHARVVMPPVYDSKLQSFDEDAILKMPGIVRIVRNGSMLAVVARGEWQAVTAQRALANGC
EEEEEECCCCCCHHHHCCCCCCEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCC
RWSTGRSLPDRNTVHEELKRISTQRIEIANTHTATAPATKTLTATFLKNYLLHGSIGPSC
CCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
SVAHLENGVLTVWTHSQGVYPLRDGLAEMLSMPKQSIRCVHVEGSGCYGHNGADDAAAHA
EEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCHHHHHE
ALIAVAMPDQPVRVQWMREQEHAWDHFTPAMVTEISASLDASGHIVDWKYALWSSSHNER
EEEEEECCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCE
IVNAGRLLPARMLEPPFVSAPSTPMLQPEGGGDRNAIPLYAFPNMHVVNNFSPTMPLQTS
EHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCHHH
AMRSLGAHMNVLSIESFMDELAHTAGVDPVEFRLRHMQDPRARQVIELAATRFGWPRPPR
HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
ARNRGVGFAFGKYKNLMAYVAIAVEITIVPETGQVILERAEAAVDAGQIVTPDGIRNQIE
CCCCCCCEEHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHCCCCEECCHHHHHHHC
GGIIQAASWTLYEELKYDTQRVRSFDWSSYPILRFSAAPRSLNVHLINRPGAPFLGAAEA
CCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCC
SMGPTAGALANAIFDATGQRLREMPFAGERLRRRIDA
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MNDLENQHDDIDEGRRNFIVSSALFVAFSLAPASRAVAQAVIADEGAAVHVSKATETLAG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHC
SLKTNPLLDAWIKITPEGKVTVFTGKVELGTGVRTALLQIAAEELDMRPSLITFLTADTG
CCCCCCCEEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
ASPDEGLTAGSHTIADSGSALLNAAAQVRALLIDGAAKHLGVDPHALTTSDGSIKAPDGR
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCEECCCCC
TMSYGNAVRLVNLHRAATPASPLRDPATFKVIGESLPRVDIPNKVTGGVSYVQDIELPGM
EECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCC
LHARVVMPPVYDSKLQSFDEDAILKMPGIVRIVRNGSMLAVVARGEWQAVTAQRALANGC
EEEEEECCCCCCHHHHCCCCCCEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCC
RWSTGRSLPDRNTVHEELKRISTQRIEIANTHTATAPATKTLTATFLKNYLLHGSIGPSC
CCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
SVAHLENGVLTVWTHSQGVYPLRDGLAEMLSMPKQSIRCVHVEGSGCYGHNGADDAAAHA
EEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCHHHHHE
ALIAVAMPDQPVRVQWMREQEHAWDHFTPAMVTEISASLDASGHIVDWKYALWSSSHNER
EEEEEECCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCE
IVNAGRLLPARMLEPPFVSAPSTPMLQPEGGGDRNAIPLYAFPNMHVVNNFSPTMPLQTS
EHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCHHH
AMRSLGAHMNVLSIESFMDELAHTAGVDPVEFRLRHMQDPRARQVIELAATRFGWPRPPR
HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
ARNRGVGFAFGKYKNLMAYVAIAVEITIVPETGQVILERAEAAVDAGQIVTPDGIRNQIE
CCCCCCCEEHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHCCCCEECCHHHHHHHC
GGIIQAASWTLYEELKYDTQRVRSFDWSSYPILRFSAAPRSLNVHLINRPGAPFLGAAEA
CCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCC
SMGPTAGALANAIFDATGQRLREMPFAGERLRRRIDA
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2606906 [H]