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The map label for this gene is 78066419

Identifier: 78066419

GI number: 78066419

Start: 1972717

End: 1973955

Strand: Direct

Name: 78066419

Synonym: Bcep18194_A4950

Alternate gene names: NA

Gene position: 1972717-1973955 (Clockwise)

Preceding gene: 78066418

Following gene: 78066421

Centisome position: 53.4

GC content: 57.79

Gene sequence:

>1239_bases
ATGACGATCCTGCGAAGTGCAAAAGTCGTGGTGGCTATGTTGCCGCTCGGATGGGCGTTCGGTGTCTGCGCACAAAGTAG
CGTAATGCTGTACGGCATCGTTGACCCAGACGTGGTGTTCGTGAGCAATGCGCAGGTGAACAAGGTCGGTGGCACATTGC
ACGGTGCCCGTCAGGTCTCGCTGCAGGATGCAACCACTTCGGCTTATGTCGGTAGTCGGTTCGGTATTCGAGGTAGGGAA
GACCTCGGCGGCGGCACGTCTACGATATTCACTCTCGAGAACGGCTTCAGCGTGGCGAACGGCTTTCTCGGGCAGGGTGG
CGCACTGTTCGGCCGGCAGGCGTTCGTGGGTCTATCGAACGATAGCCTGGGCAGTTTGACGCTCGGGAGACAATATTCAC
CCGTGGTGGATTTCCTTTCCCCACTAACGACTGTTACGCAGTGGGGCGGTTTCATCACCGCGCATCCGGACGATATCGAC
AATCTCGGCTTAACGGTGCGACAGAACAATTCAGTAAAGATTTCGTCGCCTGTCTGGCATGGATGGTCAGCCAGTGCAAT
GTATGGCTTTGGCGGAGTCGCGGGTCAAATGGCGCGAAATCAGGTCATTGCGGCGGGTGCGGGCTACGTGGGCGGCGCGC
TGCGCATTGGCGTCGGATATCTGAGCGCGTACGACCCGAACGTGTCCATGTGGGGCAACCAACCCAACGGGGGCGGCAAT
TTGGTAAATAACATCGGCTCGTTCGGCTCGGAGACGACGCCGCAGAAGAATCCCGTTATGGCTGGATATGCATCCGCTAG
CCGTGAACAAACGATTGGTGCTGGAGCAAGCTATACGCTAGGCAGGGCGACGCTTGGGGCAGCGTATACGAACACGCGCT
TTGTCGGACTAGGTTCAGACGCTGGCCCCAATCCGCAAGGCTACGTCGGTAGCGCAACATTCAATACGATCGAAGTCAAT
GGGGCCTATCGAATTGCCCCTGCCGTATCGCTCGGGGCATCATATTCGTACACGCTTACGCGTGGTCCCGATGCGATTGG
GGCGCATTACAACCAGATCAATGCTGGCGTGCACTACGCGCTGTCGAAACGCACGGATGTCTATATGATCGCGGTCTATC
AGCGTGCATCTGGTGTCGACTCGCTTGGGCAATCAGCCGTGGCATCGATCAATGGGATGACACCATCGGCGTCACGACAG
CAGTTCGTGGATGCGATCGGCCTCGCGCATCGATTCTGA

Upstream 100 bases:

>100_bases
TGAATCGCGGGGTATGAGTACAACCGGATTCTCGTTCATCGGTCGACCCTTTCAGTTGTAGTTCGAAAATTAATACGTAT
TACTAATTATTGGAGTGGGT

Downstream 100 bases:

>100_bases
CCAGTGCGCGGCATACTGCGGTGTCCATTCGAGAAGGTAGCAACCGTCAGTCGTAGCGCCTTGATGCGATGTAGCGCAAA
GCGCTTGCGCTTCAGCGCTG

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTILRSAKVVVAMLPLGWAFGVCAQSSVMLYGIVDPDVVFVSNAQVNKVGGTLHGARQVSLQDATTSAYVGSRFGIRGRE
DLGGGTSTIFTLENGFSVANGFLGQGGALFGRQAFVGLSNDSLGSLTLGRQYSPVVDFLSPLTTVTQWGGFITAHPDDID
NLGLTVRQNNSVKISSPVWHGWSASAMYGFGGVAGQMARNQVIAAGAGYVGGALRIGVGYLSAYDPNVSMWGNQPNGGGN
LVNNIGSFGSETTPQKNPVMAGYASASREQTIGAGASYTLGRATLGAAYTNTRFVGLGSDAGPNPQGYVGSATFNTIEVN
GAYRIAPAVSLGASYSYTLTRGPDAIGAHYNQINAGVHYALSKRTDVYMIAVYQRASGVDSLGQSAVASINGMTPSASRQ
QFVDAIGLAHRF

Sequences:

>Translated_412_residues
MTILRSAKVVVAMLPLGWAFGVCAQSSVMLYGIVDPDVVFVSNAQVNKVGGTLHGARQVSLQDATTSAYVGSRFGIRGRE
DLGGGTSTIFTLENGFSVANGFLGQGGALFGRQAFVGLSNDSLGSLTLGRQYSPVVDFLSPLTTVTQWGGFITAHPDDID
NLGLTVRQNNSVKISSPVWHGWSASAMYGFGGVAGQMARNQVIAAGAGYVGGALRIGVGYLSAYDPNVSMWGNQPNGGGN
LVNNIGSFGSETTPQKNPVMAGYASASREQTIGAGASYTLGRATLGAAYTNTRFVGLGSDAGPNPQGYVGSATFNTIEVN
GAYRIAPAVSLGASYSYTLTRGPDAIGAHYNQINAGVHYALSKRTDVYMIAVYQRASGVDSLGQSAVASINGMTPSASRQ
QFVDAIGLAHRF
>Mature_411_residues
TILRSAKVVVAMLPLGWAFGVCAQSSVMLYGIVDPDVVFVSNAQVNKVGGTLHGARQVSLQDATTSAYVGSRFGIRGRED
LGGGTSTIFTLENGFSVANGFLGQGGALFGRQAFVGLSNDSLGSLTLGRQYSPVVDFLSPLTTVTQWGGFITAHPDDIDN
LGLTVRQNNSVKISSPVWHGWSASAMYGFGGVAGQMARNQVIAAGAGYVGGALRIGVGYLSAYDPNVSMWGNQPNGGGNL
VNNIGSFGSETTPQKNPVMAGYASASREQTIGAGASYTLGRATLGAAYTNTRFVGLGSDAGPNPQGYVGSATFNTIEVNG
AYRIAPAVSLGASYSYTLTRGPDAIGAHYNQINAGVHYALSKRTDVYMIAVYQRASGVDSLGQSAVASINGMTPSASRQQ
FVDAIGLAHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 42688; Mature: 42557

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILRSAKVVVAMLPLGWAFGVCAQSSVMLYGIVDPDVVFVSNAQVNKVGGTLHGARQVS
CCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCEEEEECCEEECCCCCCCCCEEEE
LQDATTSAYVGSRFGIRGREDLGGGTSTIFTLENGFSVANGFLGQGGALFGRQAFVGLSN
EECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCEECCEEEEEECC
DSLGSLTLGRQYSPVVDFLSPLTTVTQWGGFITAHPDDIDNLGLTVRQNNSVKISSPVWH
CCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCEEECCCCCC
GWSASAMYGFGGVAGQMARNQVIAAGAGYVGGALRIGVGYLSAYDPNVSMWGNQPNGGGN
CCCCCCEECCCCHHHHHHCCEEEEECCCCCCCEEEEEEEEEEEECCCCEECCCCCCCCCH
LVNNIGSFGSETTPQKNPVMAGYASASREQTIGAGASYTLGRATLGAAYTNTRFVGLGSD
HHHHHHCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCEEECCHHHCEEECCCEEEEECCC
AGPNPQGYVGSATFNTIEVNGAYRIAPAVSLGASYSYTLTRGPDAIGAHYNQINAGVHYA
CCCCCCCEEECCEEEEEEECCCEEEECEEECCCCEEEEEECCCCHHCCCHHHHCCCEEEE
LSKRTDVYMIAVYQRASGVDSLGQSAVASINGMTPSASRQQFVDAIGLAHRF
ECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TILRSAKVVVAMLPLGWAFGVCAQSSVMLYGIVDPDVVFVSNAQVNKVGGTLHGARQVS
CCCCCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCEEEEECCEEECCCCCCCCCEEEE
LQDATTSAYVGSRFGIRGREDLGGGTSTIFTLENGFSVANGFLGQGGALFGRQAFVGLSN
EECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCEECCEEEEEECC
DSLGSLTLGRQYSPVVDFLSPLTTVTQWGGFITAHPDDIDNLGLTVRQNNSVKISSPVWH
CCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCEEECCCCCC
GWSASAMYGFGGVAGQMARNQVIAAGAGYVGGALRIGVGYLSAYDPNVSMWGNQPNGGGN
CCCCCCEECCCCHHHHHHCCEEEEECCCCCCCEEEEEEEEEEEECCCCEECCCCCCCCCH
LVNNIGSFGSETTPQKNPVMAGYASASREQTIGAGASYTLGRATLGAAYTNTRFVGLGSD
HHHHHHCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCEEECCHHHCEEECCCEEEEECCC
AGPNPQGYVGSATFNTIEVNGAYRIAPAVSLGASYSYTLTRGPDAIGAHYNQINAGVHYA
CCCCCCCEEECCEEEEEEECCCEEEECEEECCCCEEEEEECCCCHHCCCHHHHCCCEEEE
LSKRTDVYMIAVYQRASGVDSLGQSAVASINGMTPSASRQQFVDAIGLAHRF
ECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]