| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is pcaK [H]
Identifier: 78066374
GI number: 78066374
Start: 1922535
End: 1923875
Strand: Direct
Name: pcaK [H]
Synonym: Bcep18194_A4904
Alternate gene names: 78066374
Gene position: 1922535-1923875 (Clockwise)
Preceding gene: 78066373
Following gene: 78066378
Centisome position: 52.04
GC content: 67.11
Gene sequence:
>1341_bases ATGGCTGCGTCGTCGGACGAGGCAGTACTTTCCGTATTCGATACACGCCCGATGGGGCGGCTGCAATGGCTTGCGTTGTC GTTGTGTGGTCTCTGCATGGTCGTCGATGGATACGACGTGCAGGCGATGGCCTATGCTGCGCCGGCCTTGATGAAGACAT GGGGGATCGAGCGGACGGTGCTGGGGCCCGTGTTCAGCGCGGGGTTGCTCGGGATGTTCGCCGGGTCGCTGCTGCTCGCC GGGCTGGCGGACAGGATCGGGCGCCGGCCGCTGCTCGTCGCGGCGAGCATGTGGGTGGCCGGCTGTATGGCGGTGACGGC GCATGCGGGCTCGCTCGACCAACTGATCGCGATCCGGTTCGCAGCCGGTGTCGGCATGGGCGCGATCGTGCCCAATGCGA TGTCGCTGGCGGGCGAGTACAGCCCGAGCCGCCTTCGCATCACGCTGATGATGGCGGTCTCGTCCGGCTACATTGCGGGC GGTGTGCTGGGCGGCGCCGTGGCCGCGTTCGTCATTGAAACCTTCGGATGGCGCGGGGTGTTCGACGTGGGAGCGTTGCT GACGGCGATACTGTCCGTGGCGATGTGGATGGTCTTGCCCGAATCGATCCAGTTTGCGCTGGCACGACGCCCGGGACGAC CGCAAACGCTGCGCCTTCTTCAGCGTGCGGTGCCCAACGCGACGTTGCCGCCCGGGTTCCGTACGGAACGGCCGGATCGA CAACCTGCGGTGGCGACGCTGTTCGGAGAAGGGCGAGCCGTGGCGACGCCGCTGCTGTGGGGCGCGAACTTCGCCAACAT GCTGTGCGCGTATTTCCTTGCCGCGTGGATTCCGTTGCTGATGGCCGGTAACGGCGCGTCGCCCGGTATGCCTGTGCTCG CGGGTACGGCCTTGTGGCTGGGTGGCCTGCTCGGCAACTGGCTGCTCGGATTGCTGATCGATCGCAGGGGCTACGCCGTG GTGCTGATCGCGAACTTCGTGGCCGGCGGCATGGCCATTGCCGGGATCAGCGTGTTCCACGCTTTTCCGGTTCCTGCACT GGCTTGCATCGCATTCGCCGGCTTTTGCGTGCTCGGCGGACAATCCGGGCTCAATGCGCTGGCCGTCGTCCTTTATCCGA GCGCGGCGCGTGCGACCGGCGCTGGATGGGCGCTTGGCGTCGGGCGCCTCGGTGCGGTGCTGGGGCCCGTTGCAGGTGGA TACCTGATGGCAATGACTTGGACAGCGGAGCAGACCTTGATCGCGTCCGCGTTGCCTGCAGTGGCTGCGGCAGTAGCGGT CGGCATGCTCGGTCGGCTCCGCCGGCAGGGTGCCGCATCGGTCGCTCAGACCGCAGCCTGA
Upstream 100 bases:
>100_bases ACCGCGATCACGCGGCCGTCCAGATCGTCACGAGGCGACGGAGGTTTGCGACGAATCTGCCGCAATTGAAGAAGCCTGTC AGGGTATGGAGGAGACAATC
Downstream 100 bases:
>100_bases AGCCTGCCGCGCGCAGGATCCAGGCAGTACGTCATCAAACTGCCCGGCCGTCCGACGTTCGATTCGGCGCAACCGGGCAG CGTCAGGTTTGCGGCGGCTC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MAASSDEAVLSVFDTRPMGRLQWLALSLCGLCMVVDGYDVQAMAYAAPALMKTWGIERTVLGPVFSAGLLGMFAGSLLLA GLADRIGRRPLLVAASMWVAGCMAVTAHAGSLDQLIAIRFAAGVGMGAIVPNAMSLAGEYSPSRLRITLMMAVSSGYIAG GVLGGAVAAFVIETFGWRGVFDVGALLTAILSVAMWMVLPESIQFALARRPGRPQTLRLLQRAVPNATLPPGFRTERPDR QPAVATLFGEGRAVATPLLWGANFANMLCAYFLAAWIPLLMAGNGASPGMPVLAGTALWLGGLLGNWLLGLLIDRRGYAV VLIANFVAGGMAIAGISVFHAFPVPALACIAFAGFCVLGGQSGLNALAVVLYPSAARATGAGWALGVGRLGAVLGPVAGG YLMAMTWTAEQTLIASALPAVAAAVAVGMLGRLRRQGAASVAQTAA
Sequences:
>Translated_446_residues MAASSDEAVLSVFDTRPMGRLQWLALSLCGLCMVVDGYDVQAMAYAAPALMKTWGIERTVLGPVFSAGLLGMFAGSLLLA GLADRIGRRPLLVAASMWVAGCMAVTAHAGSLDQLIAIRFAAGVGMGAIVPNAMSLAGEYSPSRLRITLMMAVSSGYIAG GVLGGAVAAFVIETFGWRGVFDVGALLTAILSVAMWMVLPESIQFALARRPGRPQTLRLLQRAVPNATLPPGFRTERPDR QPAVATLFGEGRAVATPLLWGANFANMLCAYFLAAWIPLLMAGNGASPGMPVLAGTALWLGGLLGNWLLGLLIDRRGYAV VLIANFVAGGMAIAGISVFHAFPVPALACIAFAGFCVLGGQSGLNALAVVLYPSAARATGAGWALGVGRLGAVLGPVAGG YLMAMTWTAEQTLIASALPAVAAAVAVGMLGRLRRQGAASVAQTAA >Mature_445_residues AASSDEAVLSVFDTRPMGRLQWLALSLCGLCMVVDGYDVQAMAYAAPALMKTWGIERTVLGPVFSAGLLGMFAGSLLLAG LADRIGRRPLLVAASMWVAGCMAVTAHAGSLDQLIAIRFAAGVGMGAIVPNAMSLAGEYSPSRLRITLMMAVSSGYIAGG VLGGAVAAFVIETFGWRGVFDVGALLTAILSVAMWMVLPESIQFALARRPGRPQTLRLLQRAVPNATLPPGFRTERPDRQ PAVATLFGEGRAVATPLLWGANFANMLCAYFLAAWIPLLMAGNGASPGMPVLAGTALWLGGLLGNWLLGLLIDRRGYAVV LIANFVAGGMAIAGISVFHAFPVPALACIAFAGFCVLGGQSGLNALAVVLYPSAARATGAGWALGVGRLGAVLGPVAGGY LMAMTWTAEQTLIASALPAVAAAVAVGMLGRLRRQGAASVAQTAA
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=407, Percent_Identity=25.3071253071253, Blast_Score=77, Evalue=4e-14, Organism=Escherichia coli, GI87081723, Length=419, Percent_Identity=32.2195704057279, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI87082231, Length=188, Percent_Identity=27.6595744680851, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788074, Length=359, Percent_Identity=24.5125348189415, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI32564663, Length=416, Percent_Identity=26.6826923076923, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45772; Mature: 45641
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASSDEAVLSVFDTRPMGRLQWLALSLCGLCMVVDGYDVQAMAYAAPALMKTWGIERTV CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCHHH LGPVFSAGLLGMFAGSLLLAGLADRIGRRPLLVAASMWVAGCMAVTAHAGSLDQLIAIRF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AAGVGMGAIVPNAMSLAGEYSPSRLRITLMMAVSSGYIAGGVLGGAVAAFVIETFGWRGV HHCCCCHHHCCHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCH FDVGALLTAILSVAMWMVLPESIQFALARRPGRPQTLRLLQRAVPNATLPPGFRTERPDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC QPAVATLFGEGRAVATPLLWGANFANMLCAYFLAAWIPLLMAGNGASPGMPVLAGTALWL CCCEEEEECCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GGLLGNWLLGLLIDRRGYAVVLIANFVAGGMAIAGISVFHAFPVPALACIAFAGFCVLGG HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC QSGLNALAVVLYPSAARATGAGWALGVGRLGAVLGPVAGGYLMAMTWTAEQTLIASALPA CCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHH VAAAVAVGMLGRLRRQGAASVAQTAA HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AASSDEAVLSVFDTRPMGRLQWLALSLCGLCMVVDGYDVQAMAYAAPALMKTWGIERTV CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCHHH LGPVFSAGLLGMFAGSLLLAGLADRIGRRPLLVAASMWVAGCMAVTAHAGSLDQLIAIRF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AAGVGMGAIVPNAMSLAGEYSPSRLRITLMMAVSSGYIAGGVLGGAVAAFVIETFGWRGV HHCCCCHHHCCHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCH FDVGALLTAILSVAMWMVLPESIQFALARRPGRPQTLRLLQRAVPNATLPPGFRTERPDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC QPAVATLFGEGRAVATPLLWGANFANMLCAYFLAAWIPLLMAGNGASPGMPVLAGTALWL CCCEEEEECCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GGLLGNWLLGLLIDRRGYAVVLIANFVAGGMAIAGISVFHAFPVPALACIAFAGFCVLGG HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC QSGLNALAVVLYPSAARATGAGWALGVGRLGAVLGPVAGGYLMAMTWTAEQTLIASALPA CCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHH VAAAVAVGMLGRLRRQGAASVAQTAA HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]