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The map label for this gene is modB [H]

Identifier: 78066318

GI number: 78066318

Start: 1866450

End: 1867382

Strand: Direct

Name: modB [H]

Synonym: Bcep18194_A4848

Alternate gene names: 78066318

Gene position: 1866450-1867382 (Clockwise)

Preceding gene: 78066317

Following gene: 78066319

Centisome position: 50.52

GC content: 67.42

Gene sequence:

>933_bases
ATGGCGACCGACAATCATGCCGCCCGCACCTGGCCGCCGAAGCATGACGCGCCCGATGCGTCCGGTGAGCGGCCCGTCGA
CGCGAGGAAACCGCAGAAGATGACAAGCAATCTCGCCGGCCGCGCCTGGAAGGCGCTCGTGTGGGCGCTGATGGCGTTCT
TCCTGCTGAACGTGATGCTGCTGATCGCGACCGTCGCGGTGAATTCGATCGCGACCCGCTGGTTCGGCACGCCGCTGCCG
CAGGGCTTCACGCTGCACTGGTACGCGAAGGCGTGGGAGGACTTCCAGCTCGCGAGCGTACTGTGGGTGACCGTCGAGGT
CGTCGGCGCGGTCGTGCTGCTGTCGATCGCGCTCGGCGTGCCGGCCGCGTATGCGCTCGCGCGCGTGCAGTTTCGCGGCA
AGCGCTTCGCGCTGCTGGTGTTCCTGCTGCCGCTGATGGTGCCGCCCGTCACGTACGGGATCCCGATGGCCACCGTGATG
TACAAGGTCGGGCTCGCGGGCACGCTGCCCGGCGTGATCCTCGCGAACCTCGTGCCGGCGCTGCCGTTCGTGATCCTCGT
GATGACGCCGTTCATCGAGCAGATCGACCCGAATCTCGAGTCCGCCGCGCGCATCTTCGGCGCGAACACGTGGCGCTATT
TCCGCTACGTGCTGCTGCCGCTGCTGGTGCCCGGCATGCTCGCGGCGGGGTTGCTCGTGCTGGTGCGCACGATCGGGATG
TTCGAGCTGACCTTCTTCACCGCGGGGCCGAGCACGCAGACGCTCGTCGTCGCGCTGTATTACGCGGTGTTCTCGACCGG
CGTGCGCGCGCCGCAGTCGATCGACGCGATGGCGATGATCTACATGGCCATCACGCTCGTGTGGGTCGTGATCGCGCTGC
AGTTCGTGAGCCCGACGCAACTCGTCAGCCGCGTGAAGCAGGAGCGGCAATAG

Upstream 100 bases:

>100_bases
TCGCGATCGTGATGGGCTTCGTGCAGTTGCTGGTGGTCGCGTCGATGCTCGGCGCGCGCCGCTTCTTCTATACGGGCGCG
GTGACGGGAGGCAAGGGCTG

Downstream 100 bases:

>100_bases
GCGAGGGCGAGGGCGAGGGCGACGCATGGGCACGCGATGCCGCTTGCGCATCCGTGCAATTGGTTACAAATGGATACCGC
GCACGACACGCGGACGTTGC

Product: ABC transporter, inner membrane subunit

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MATDNHAARTWPPKHDAPDASGERPVDARKPQKMTSNLAGRAWKALVWALMAFFLLNVMLLIATVAVNSIATRWFGTPLP
QGFTLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSIALGVPAAYALARVQFRGKRFALLVFLLPLMVPPVTYGIPMATVM
YKVGLAGTLPGVILANLVPALPFVILVMTPFIEQIDPNLESAARIFGANTWRYFRYVLLPLLVPGMLAAGLLVLVRTIGM
FELTFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLVWVVIALQFVSPTQLVSRVKQERQ

Sequences:

>Translated_310_residues
MATDNHAARTWPPKHDAPDASGERPVDARKPQKMTSNLAGRAWKALVWALMAFFLLNVMLLIATVAVNSIATRWFGTPLP
QGFTLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSIALGVPAAYALARVQFRGKRFALLVFLLPLMVPPVTYGIPMATVM
YKVGLAGTLPGVILANLVPALPFVILVMTPFIEQIDPNLESAARIFGANTWRYFRYVLLPLLVPGMLAAGLLVLVRTIGM
FELTFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLVWVVIALQFVSPTQLVSRVKQERQ
>Mature_309_residues
ATDNHAARTWPPKHDAPDASGERPVDARKPQKMTSNLAGRAWKALVWALMAFFLLNVMLLIATVAVNSIATRWFGTPLPQ
GFTLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSIALGVPAAYALARVQFRGKRFALLVFLLPLMVPPVTYGIPMATVMY
KVGLAGTLPGVILANLVPALPFVILVMTPFIEQIDPNLESAARIFGANTWRYFRYVLLPLLVPGMLAAGLLVLVRTIGMF
ELTFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLVWVVIALQFVSPTQLVSRVKQERQ

Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=244, Percent_Identity=27.0491803278689, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788764, Length=144, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787714, Length=196, Percent_Identity=30.1020408163265, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011867 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34061; Mature: 33930

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDNHAARTWPPKHDAPDASGERPVDARKPQKMTSNLAGRAWKALVWALMAFFLLNVML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIATVAVNSIATRWFGTPLPQGFTLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSIALGV
HHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAAYALARVQFRGKRFALLVFLLPLMVPPVTYGIPMATVMYKVGLAGTLPGVILANLVPA
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
LPFVILVMTPFIEQIDPNLESAARIFGANTWRYFRYVLLPLLVPGMLAAGLLVLVRTIGM
HHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FELTFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLVWVVIALQFVSPTQ
HHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVSRVKQERQ
HHHHHHHHCC
>Mature Secondary Structure 
ATDNHAARTWPPKHDAPDASGERPVDARKPQKMTSNLAGRAWKALVWALMAFFLLNVML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIATVAVNSIATRWFGTPLPQGFTLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSIALGV
HHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAAYALARVQFRGKRFALLVFLLPLMVPPVTYGIPMATVMYKVGLAGTLPGVILANLVPA
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
LPFVILVMTPFIEQIDPNLESAARIFGANTWRYFRYVLLPLLVPGMLAAGLLVLVRTIGM
HHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FELTFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLVWVVIALQFVSPTQ
HHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVSRVKQERQ
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]