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The map label for this gene is amyD [H]

Identifier: 78066317

GI number: 78066317

Start: 1865581

End: 1866450

Strand: Direct

Name: amyD [H]

Synonym: Bcep18194_A4847

Alternate gene names: 78066317

Gene position: 1865581-1866450 (Clockwise)

Preceding gene: 78066316

Following gene: 78066318

Centisome position: 50.5

GC content: 68.05

Gene sequence:

>870_bases
ATGAGCACGCTCCCGGCCGGCACGCCGCGCGACGCGAAAGCCTGGCTCGTCACGCCCGCGCTCGGGTTCATCGTCGCGCT
GTTCATCTATCCGTTCGCGTACGGCCTCGTGCTGTCGTTCCAGCCGATGAACGGCGGCGGCGCGCTCGCGAACTACGTGC
AGTTCTTCACCGACACCGCGATGTGGCCGACCGTGCTCGTCACGCTGAAGCTCGCGGTGCCGGCGACGCTGATCAACGTC
GGCATCGCGGTGCCCGTCGCGTTCGCGCTCCGCCGCAACTCACCGTACCAGAAGTTCGTCACGACGCTGCTCGTGATTCC
CGTCACGCTCGGCACGGTACTCGTCGCCGACGGGATGCTCACGTACTTCGGGCCGAACGGCTGGTTCCCGCAGGCGCTGC
AGGGGCTGCACCTGTACACCGACGAAGTGCGCCTCACGCACAACTACTGGGGCGTGCTGCTGTCGCTGATCGTGTCGGGC
TTTCCGTTCGCGTTCCTGCTGATGCTGTCGTACATCAGCGGCATCGACCCGACGCTCGCGCGCGCGGCCGCGACGCTCGG
CGCGAACCCGTGGCAGCAGTTCCGGCAGATCTACCTGCCGCTGCTCGTGCCGGGGCTCACGATGGCCGCGTGCCTGTCGT
TCGTGCAGGCGTTCTCGGTGTTCCCGTCGGCCGTGCTGCTCGGCGCGCCGGCCGGGCCGACGCGCGTGATCTCGATCGCG
GCGGCGGAAGCCGCATTCGAAAGCTACGACTATTCGCTCGCATCGGCGATCGCGATCGTGATGGGCTTCGTGCAGTTGCT
GGTGGTCGCGTCGATGCTCGGCGCGCGCCGCTTCTTCTATACGGGCGCGGTGACGGGAGGCAAGGGCTGA

Upstream 100 bases:

>100_bases
GAGCCGCTGCGGCTGCGCGTTGCGCCGTCGCGCACGCTCGTCTACCCGGGAGCGCCGACATGAGCGGCGTGGCCGCGACG
CGGGTACACCGGGAGGCCGC

Downstream 100 bases:

>100_bases
TGGCGACCGACAATCATGCCGCCCGCACCTGGCCGCCGAAGCATGACGCGCCCGATGCGTCCGGTGAGCGGCCCGTCGAC
GCGAGGAAACCGCAGAAGAT

Product: ABC transporter, inner membrane subunit

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSTLPAGTPRDAKAWLVTPALGFIVALFIYPFAYGLVLSFQPMNGGGALANYVQFFTDTAMWPTVLVTLKLAVPATLINV
GIAVPVAFALRRNSPYQKFVTTLLVIPVTLGTVLVADGMLTYFGPNGWFPQALQGLHLYTDEVRLTHNYWGVLLSLIVSG
FPFAFLLMLSYISGIDPTLARAAATLGANPWQQFRQIYLPLLVPGLTMAACLSFVQAFSVFPSAVLLGAPAGPTRVISIA
AAEAAFESYDYSLASAIAIVMGFVQLLVVASMLGARRFFYTGAVTGGKG

Sequences:

>Translated_289_residues
MSTLPAGTPRDAKAWLVTPALGFIVALFIYPFAYGLVLSFQPMNGGGALANYVQFFTDTAMWPTVLVTLKLAVPATLINV
GIAVPVAFALRRNSPYQKFVTTLLVIPVTLGTVLVADGMLTYFGPNGWFPQALQGLHLYTDEVRLTHNYWGVLLSLIVSG
FPFAFLLMLSYISGIDPTLARAAATLGANPWQQFRQIYLPLLVPGLTMAACLSFVQAFSVFPSAVLLGAPAGPTRVISIA
AAEAAFESYDYSLASAIAIVMGFVQLLVVASMLGARRFFYTGAVTGGKG
>Mature_288_residues
STLPAGTPRDAKAWLVTPALGFIVALFIYPFAYGLVLSFQPMNGGGALANYVQFFTDTAMWPTVLVTLKLAVPATLINVG
IAVPVAFALRRNSPYQKFVTTLLVIPVTLGTVLVADGMLTYFGPNGWFPQALQGLHLYTDEVRLTHNYWGVLLSLIVSGF
PFAFLLMLSYISGIDPTLARAAATLGANPWQQFRQIYLPLLVPGLTMAACLSFVQAFSVFPSAVLLGAPAGPTRVISIAA
AEAAFESYDYSLASAIAIVMGFVQLLVVASMLGARRFFYTGAVTGGKG

Specific function: Probably part of a binding-protein-dependent transport system starch degradation products. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788764, Length=214, Percent_Identity=27.1028037383178, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787080, Length=214, Percent_Identity=26.6355140186916, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30845; Mature: 30714

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLPAGTPRDAKAWLVTPALGFIVALFIYPFAYGLVLSFQPMNGGGALANYVQFFTDTA
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHH
MWPTVLVTLKLAVPATLINVGIAVPVAFALRRNSPYQKFVTTLLVIPVTLGTVLVADGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
TYFGPNGWFPQALQGLHLYTDEVRLTHNYWGVLLSLIVSGFPFAFLLMLSYISGIDPTLA
EEECCCCCCHHHHCCHHHHHHHEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH
RAAATLGANPWQQFRQIYLPLLVPGLTMAACLSFVQAFSVFPSAVLLGAPAGPTRVISIA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHEEEHH
AAEAAFESYDYSLASAIAIVMGFVQLLVVASMLGARRFFYTGAVTGGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure 
STLPAGTPRDAKAWLVTPALGFIVALFIYPFAYGLVLSFQPMNGGGALANYVQFFTDTA
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHH
MWPTVLVTLKLAVPATLINVGIAVPVAFALRRNSPYQKFVTTLLVIPVTLGTVLVADGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
TYFGPNGWFPQALQGLHLYTDEVRLTHNYWGVLLSLIVSGFPFAFLLMLSYISGIDPTLA
EEECCCCCCHHHHCCHHHHHHHEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH
RAAATLGANPWQQFRQIYLPLLVPGLTMAACLSFVQAFSVFPSAVLLGAPAGPTRVISIA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHEEEHH
AAEAAFESYDYSLASAIAIVMGFVQLLVVASMLGARRFFYTGAVTGGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1874408 [H]