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The map label for this gene is omp32 [H]

Identifier: 78066307

GI number: 78066307

Start: 1852556

End: 1853680

Strand: Reverse

Name: omp32 [H]

Synonym: Bcep18194_A4837

Alternate gene names: 78066307

Gene position: 1853680-1852556 (Counterclockwise)

Preceding gene: 78066308

Following gene: 78066306

Centisome position: 50.18

GC content: 66.58

Gene sequence:

>1125_bases
ATGAAGACGAAACTGGCCGCGCTCGCGGCGCTTGCCGGCTGTTCGGCGCTCGCGCACGCGCAATCCTCCGTCACGCTCTA
TGGCGTGATCGACTCGGGCCTGGTGTACCAGAGCACGTCGGCGGCGTCGTTCAGCCCGACCGCGCCGAACACGGGCAAGG
TGTTCCGCATGAAGGACGGCGGCATCTACTCGAGCTTCTGGGGCATCAAGGGCAGCGAGGACATCGGCGGCGGCTATAAG
GTCAACTTCAAACTGCAGGGCTCGTTCGACAGCGGCAGCGGCAAGCTGCAGCTGAGCGACACGCCGGGCGCCGTCGCGAT
CTTCAACCAGGTCGCGTCGCTCGGCGTGTCGGGCCCGTTCGGCTCGTTCACGGCCGGCCGCCAGATCGTGCCGATGATCT
ACGCGATGGCCGACACCGACGTGCGCAACGCGCAGTTCTTCGGCAGCGTGCTGATCGCGTGGCTCGGCCTGAACACGGCG
GCCGGCTGGTCGGGGACGAGCACCAACGCAGCGATCGGCGCGCTGTACGACAGTAATGCGCTCGTCTACCAGTCGCCGAC
CTTCGCGGGTGCGTCGATCGCGCTCGAATACGCGCCGGGCGGTGTGGCCGGGCAGTTCCAGGGCGGCACGCGCGAATCGG
TCGTGCTGAAGTATGCGAACTACGGGCTCAACGCTTCGGCCGTCTACTACAACGGGCACGACACGAGCCCGGCGCCCGGC
GTCGCGCCGACCGGCGTCGACAACAACCGCTTCTTCTACGTCGGCGCGAAATACACGATCCACGATTTCTCGGTATCGGC
GTCGTACGGCAACGGCAGGAATCCGTCGCATGCGGACAAGGTGAACCTCGACATGCTGTCGGCCGGCATCGGCTATCGCT
TCACGCCCGCGCTGCAGGTGACGTCGGCGGTGTATTACCTGAAGGACCGCAACGTCTCGGCGAACAAGTCGACGGCGGTC
GTGCTCGCGGCCGACTACAGCCTGTCGAAGCGGACGATGGTCTATGCGCAGGTCGGCCACGTGAACAACCGCGGCACGAT
GGACCAGATGCTCGTGTACGGGCAGCCGGTCGCGCCGGGCGTCGGCACGACGGCCGCGATGATCGGGCTGCGGCACAACT
TCTGA

Upstream 100 bases:

>100_bases
ACCGGCGATGCATTTCTCGTGTTCCCGCCAGCCTCGATGCTTCCCCGCTTCACCCGGACGGGCTCGATCCCGTCCGGTCC
AATACGACCCTGGAGACTTC

Downstream 100 bases:

>100_bases
TCTCTGCCGGCGGCGGCTCCCGGCGGTGTGGCGGCCACCATCGGCATCGATCGCCGGGATCGGCTACAGTGGGCGTTTTC
GGCGCGCTCTGCCCTGCCGC

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKTKLAALAALAGCSALAHAQSSVTLYGVIDSGLVYQSTSAASFSPTAPNTGKVFRMKDGGIYSSFWGIKGSEDIGGGYK
VNFKLQGSFDSGSGKLQLSDTPGAVAIFNQVASLGVSGPFGSFTAGRQIVPMIYAMADTDVRNAQFFGSVLIAWLGLNTA
AGWSGTSTNAAIGALYDSNALVYQSPTFAGASIALEYAPGGVAGQFQGGTRESVVLKYANYGLNASAVYYNGHDTSPAPG
VAPTGVDNNRFFYVGAKYTIHDFSVSASYGNGRNPSHADKVNLDMLSAGIGYRFTPALQVTSAVYYLKDRNVSANKSTAV
VLAADYSLSKRTMVYAQVGHVNNRGTMDQMLVYGQPVAPGVGTTAAMIGLRHNF

Sequences:

>Translated_374_residues
MKTKLAALAALAGCSALAHAQSSVTLYGVIDSGLVYQSTSAASFSPTAPNTGKVFRMKDGGIYSSFWGIKGSEDIGGGYK
VNFKLQGSFDSGSGKLQLSDTPGAVAIFNQVASLGVSGPFGSFTAGRQIVPMIYAMADTDVRNAQFFGSVLIAWLGLNTA
AGWSGTSTNAAIGALYDSNALVYQSPTFAGASIALEYAPGGVAGQFQGGTRESVVLKYANYGLNASAVYYNGHDTSPAPG
VAPTGVDNNRFFYVGAKYTIHDFSVSASYGNGRNPSHADKVNLDMLSAGIGYRFTPALQVTSAVYYLKDRNVSANKSTAV
VLAADYSLSKRTMVYAQVGHVNNRGTMDQMLVYGQPVAPGVGTTAAMIGLRHNF
>Mature_374_residues
MKTKLAALAALAGCSALAHAQSSVTLYGVIDSGLVYQSTSAASFSPTAPNTGKVFRMKDGGIYSSFWGIKGSEDIGGGYK
VNFKLQGSFDSGSGKLQLSDTPGAVAIFNQVASLGVSGPFGSFTAGRQIVPMIYAMADTDVRNAQFFGSVLIAWLGLNTA
AGWSGTSTNAAIGALYDSNALVYQSPTFAGASIALEYAPGGVAGQFQGGTRESVVLKYANYGLNASAVYYNGHDTSPAPG
VAPTGVDNNRFFYVGAKYTIHDFSVSASYGNGRNPSHADKVNLDMLSAGIGYRFTPALQVTSAVYYLKDRNVSANKSTAV
VLAADYSLSKRTMVYAQVGHVNNRGTMDQMLVYGQPVAPGVGTTAAMIGLRHNF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38972; Mature: 38972

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLAALAALAGCSALAHAQSSVTLYGVIDSGLVYQSTSAASFSPTAPNTGKVFRMKDG
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEECC
GIYSSFWGIKGSEDIGGGYKVNFKLQGSFDSGSGKLQLSDTPGAVAIFNQVASLGVSGPF
CEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCC
GSFTAGRQIVPMIYAMADTDVRNAQFFGSVLIAWLGLNTAAGWSGTSTNAAIGALYDSNA
CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCE
LVYQSPTFAGASIALEYAPGGVAGQFQGGTRESVVLKYANYGLNASAVYYNGHDTSPAPG
EEEECCCCCCCEEEEEECCCCCCEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCC
VAPTGVDNNRFFYVGAKYTIHDFSVSASYGNGRNPSHADKVNLDMLSAGIGYRFTPALQV
CCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCHHEE
TSAVYYLKDRNVSANKSTAVVLAADYSLSKRTMVYAQVGHVNNRGTMDQMLVYGQPVAPG
EEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHEEECCCCCCC
VGTTAAMIGLRHNF
CCCHHHEEEEECCC
>Mature Secondary Structure
MKTKLAALAALAGCSALAHAQSSVTLYGVIDSGLVYQSTSAASFSPTAPNTGKVFRMKDG
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEECC
GIYSSFWGIKGSEDIGGGYKVNFKLQGSFDSGSGKLQLSDTPGAVAIFNQVASLGVSGPF
CEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCC
GSFTAGRQIVPMIYAMADTDVRNAQFFGSVLIAWLGLNTAAGWSGTSTNAAIGALYDSNA
CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCE
LVYQSPTFAGASIALEYAPGGVAGQFQGGTRESVVLKYANYGLNASAVYYNGHDTSPAPG
EEEECCCCCCCEEEEEECCCCCCEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCC
VAPTGVDNNRFFYVGAKYTIHDFSVSASYGNGRNPSHADKVNLDMLSAGIGYRFTPALQV
CCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCHHEE
TSAVYYLKDRNVSANKSTAVVLAADYSLSKRTMVYAQVGHVNNRGTMDQMLVYGQPVAPG
EEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHEEECCCCCCC
VGTTAAMIGLRHNF
CCCHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]