| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is cobJ [H]
Identifier: 78066291
GI number: 78066291
Start: 1837323
End: 1839062
Strand: Reverse
Name: cobJ [H]
Synonym: Bcep18194_A4821
Alternate gene names: 78066291
Gene position: 1839062-1837323 (Counterclockwise)
Preceding gene: 78066292
Following gene: 78066289
Centisome position: 49.78
GC content: 70.69
Gene sequence:
>1740_bases ATGGCAAGGATGACGACGCCGCCCGCCATCGTGATTCTCGGCGCGGGCGCGCTCGATACCGCGCGGCGCATCCAGACGCG CTATCCGGGTGCGCTCGTGCATGGCCTCGCATCGCGCGTCGCGGCCGATGTGGCGTTCGACGATCTCGGCGCGCACCTGC GTGAACTCTATGCACGCGGGCTGCCGATCGTCGCGCTGTGCGCGGCCGGCATCGTGATCCGCTGCATCGCCCCCGCGCTC GCCGACAAGGGCGTCGAGCCGCCTGTGCTCGCGGTCGCGGAAGACGGCTCGGCGGTCGTACCGCTGCTCGGCGGGCTGAC GGGCGTCAACGTGATGGCGCGAGAAATCGCCGCATGCGTCGGCGTGGCTCCCGCGATCACGACGAGCGGCGAACTGCGCT TCGGCGCGTGCGTGCTCAATCCGCCGGAAGGCTATGCGCTCGCCGATCTTGCACAGGGCAAGCGCTTCGTATCCGATCTG CTCGCGGGCGCGTCGACGCGCATCGACGGCGCGGCGCCGTGGCTCGACGACGTCGCGTTGCCGCGCGACGACGCGGCTGC GCATGCGATCCGCGTGACTCCCGATGCATGGCGCGGTACGCGCGACGAGCTCGTGATTCATCCGCGCAGCGTGGTAGTGG GCATCGATGCGCAGGCTATCCAAGGCAATGAAGCACTCGCTGCGCGCATCGACGCCACGCTCGATGCGCAAGGTCTCGCG CGGCTGGCGCTCGCGGCTATCGTTGCACCCGCATCGGCAATCGGTGATGACGTGCTGGAAGAAGCGGCGCAAACGCTCGA CGTTCCGCTGCGCTTCATCGATGCCGATGTCGATGTCAGCGATAGTAACGGCGACGTACCCACCGACGCCGCCGTCCTGC TCGGCGGCGCGTTGCGTGTCGCGCACACACTGCGCGCCACGACGAACGGCATCGCATGCGCGGTTGCGTCGCATCCGGTC GATCCCGCCACGCTCGGCCGTGCACGCGGCCGCCTGACGGTGCTCGGCCTCGGCCCGGGCGGTGCTGCATGGCTTACCCC GGCCGCGCGCGCCGCGCTCGCGGAAGCGACCGACATCCTCGGCTACACGACCTACGTGAACATGGCCGGCCCGTTCCGTG GCGACCAGCGCGTGCACGGCACTGACAATCGCGAGGAAATGCAGCGCGCGCGCCATGCGTTCGAGCTCGCGGCCGAGGGC CGGCGCGTCGCGGTCGTGTCGTCGGGTGACCCGGGCGTGTTCGCGATGGCCGCGGCCGTGCTCGAAGCGCTCGATGAAGC GCGCGATCCGCACTGGGCGGCGGTCGACCTGCGCGTGGAGCCCGGTATCTCGGCGTCGCTCGCGACGGCCGCGCAGGCCG GTGCGCCGCTCGGTCACGACTTCTGTGCGATCTCGCTGTCGGACAACCTGAAGCCGTGGGACGTGATCGAGACACGCCTG CGGCATGCGGCGCAGGCCGACCTGGTGATGGCGTTCTACAACCCGATCTCGCGCGCGCGGCCTTGGCAGCTCGATCGCGC GCTCGACGTCGTGCGCGCGCACCGCACGGCCGAGACGGTGGTCGTGCTCGGCCGCGACATCGGCCGGCCGGGCGCAACGC TCACGACGACGACGCTCGGCGCGCTGCGCAGCGACCAGGTCGACATGCGCACGATGGTGATCGTCGGCTCGTCGACGACG CGGCGCTTCGCGATCGGCAACGCACGCGAGTGGGTCTATACGCCGCGCTGGTATCGCTGA
Upstream 100 bases:
>100_bases TCGAGCGCGCGACGATGGCGAGCCAGCGCATCGTGCCGCTCGACGAAGTCGATCCGATGGCGTCGCCGTATTTCTCGCTG CTCGTCGTGCCGGGGGAAAA
Downstream 100 bases:
>100_bases ACCCGGTCAGCGCGTCGGCGTGACGGTGCGTGCGTCGGCCTGCGCGGTGCCGGCTGCGCTGCCCGCGTGCCAGAACCGGT ACACGAGCACGCCGACGATG
Product: precorrin-3 methyltransferase
Products: NA
Alternate protein names: Precorrin-3 methylase; Precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MARMTTPPAIVILGAGALDTARRIQTRYPGALVHGLASRVAADVAFDDLGAHLRELYARGLPIVALCAAGIVIRCIAPAL ADKGVEPPVLAVAEDGSAVVPLLGGLTGVNVMAREIAACVGVAPAITTSGELRFGACVLNPPEGYALADLAQGKRFVSDL LAGASTRIDGAAPWLDDVALPRDDAAAHAIRVTPDAWRGTRDELVIHPRSVVVGIDAQAIQGNEALAARIDATLDAQGLA RLALAAIVAPASAIGDDVLEEAAQTLDVPLRFIDADVDVSDSNGDVPTDAAVLLGGALRVAHTLRATTNGIACAVASHPV DPATLGRARGRLTVLGLGPGGAAWLTPAARAALAEATDILGYTTYVNMAGPFRGDQRVHGTDNREEMQRARHAFELAAEG RRVAVVSSGDPGVFAMAAAVLEALDEARDPHWAAVDLRVEPGISASLATAAQAGAPLGHDFCAISLSDNLKPWDVIETRL RHAAQADLVMAFYNPISRARPWQLDRALDVVRAHRTAETVVVLGRDIGRPGATLTTTTLGALRSDQVDMRTMVIVGSSTT RRFAIGNAREWVYTPRWYR
Sequences:
>Translated_579_residues MARMTTPPAIVILGAGALDTARRIQTRYPGALVHGLASRVAADVAFDDLGAHLRELYARGLPIVALCAAGIVIRCIAPAL ADKGVEPPVLAVAEDGSAVVPLLGGLTGVNVMAREIAACVGVAPAITTSGELRFGACVLNPPEGYALADLAQGKRFVSDL LAGASTRIDGAAPWLDDVALPRDDAAAHAIRVTPDAWRGTRDELVIHPRSVVVGIDAQAIQGNEALAARIDATLDAQGLA RLALAAIVAPASAIGDDVLEEAAQTLDVPLRFIDADVDVSDSNGDVPTDAAVLLGGALRVAHTLRATTNGIACAVASHPV DPATLGRARGRLTVLGLGPGGAAWLTPAARAALAEATDILGYTTYVNMAGPFRGDQRVHGTDNREEMQRARHAFELAAEG RRVAVVSSGDPGVFAMAAAVLEALDEARDPHWAAVDLRVEPGISASLATAAQAGAPLGHDFCAISLSDNLKPWDVIETRL RHAAQADLVMAFYNPISRARPWQLDRALDVVRAHRTAETVVVLGRDIGRPGATLTTTTLGALRSDQVDMRTMVIVGSSTT RRFAIGNAREWVYTPRWYR >Mature_578_residues ARMTTPPAIVILGAGALDTARRIQTRYPGALVHGLASRVAADVAFDDLGAHLRELYARGLPIVALCAAGIVIRCIAPALA DKGVEPPVLAVAEDGSAVVPLLGGLTGVNVMAREIAACVGVAPAITTSGELRFGACVLNPPEGYALADLAQGKRFVSDLL AGASTRIDGAAPWLDDVALPRDDAAAHAIRVTPDAWRGTRDELVIHPRSVVVGIDAQAIQGNEALAARIDATLDAQGLAR LALAAIVAPASAIGDDVLEEAAQTLDVPLRFIDADVDVSDSNGDVPTDAAVLLGGALRVAHTLRATTNGIACAVASHPVD PATLGRARGRLTVLGLGPGGAAWLTPAARAALAEATDILGYTTYVNMAGPFRGDQRVHGTDNREEMQRARHAFELAAEGR RVAVVSSGDPGVFAMAAAVLEALDEARDPHWAAVDLRVEPGISASLATAAQAGAPLGHDFCAISLSDNLKPWDVIETRLR HAAQADLVMAFYNPISRARPWQLDRALDVVRAHRTAETVVVLGRDIGRPGATLTTTTLGALRSDQVDMRTMVIVGSSTTR RFAIGNAREWVYTPRWYR
Specific function: Methyltransferase that catalyzes the methylation of C-17 in precorrin-3B to form precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.131 [H]
Molecular weight: Translated: 60525; Mature: 60393
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMTTPPAIVILGAGALDTARRIQTRYPGALVHGLASRVAADVAFDDLGAHLRELYARG CCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPIVALCAAGIVIRCIAPALADKGVEPPVLAVAEDGSAVVPLLGGLTGVNVMAREIAACV CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHH GVAPAITTSGELRFGACVLNPPEGYALADLAQGKRFVSDLLAGASTRIDGAAPWLDDVAL CCCHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC PRDDAAAHAIRVTPDAWRGTRDELVIHPRSVVVGIDAQAIQGNEALAARIDATLDAQGLA CCCCCCCEEEEECCHHHCCCCCCEEECCCEEEEECCHHEECCCCCEEEECCCCCCHHHHH RLALAAIVAPASAIGDDVLEEAAQTLDVPLRFIDADVDVSDSNGDVPTDAAVLLGGALRV HHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHH AHTLRATTNGIACAVASHPVDPATLGRARGRLTVLGLGPGGAAWLTPAARAALAEATDIL HHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHH GYTTYVNMAGPFRGDQRVHGTDNREEMQRARHAFELAAEGRRVAVVSSGDPGVFAMAAAV EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH LEALDEARDPHWAAVDLRVEPGISASLATAAQAGAPLGHDFCAISLSDNLKPWDVIETRL HHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHH RHAAQADLVMAFYNPISRARPWQLDRALDVVRAHRTAETVVVLGRDIGRPGATLTTTTLG HHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEHHHHH ALRSDQVDMRTMVIVGSSTTRRFAIGNAREWVYTPRWYR HHCCCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCC >Mature Secondary Structure ARMTTPPAIVILGAGALDTARRIQTRYPGALVHGLASRVAADVAFDDLGAHLRELYARG CCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPIVALCAAGIVIRCIAPALADKGVEPPVLAVAEDGSAVVPLLGGLTGVNVMAREIAACV CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHH GVAPAITTSGELRFGACVLNPPEGYALADLAQGKRFVSDLLAGASTRIDGAAPWLDDVAL CCCHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC PRDDAAAHAIRVTPDAWRGTRDELVIHPRSVVVGIDAQAIQGNEALAARIDATLDAQGLA CCCCCCCEEEEECCHHHCCCCCCEEECCCEEEEECCHHEECCCCCEEEECCCCCCHHHHH RLALAAIVAPASAIGDDVLEEAAQTLDVPLRFIDADVDVSDSNGDVPTDAAVLLGGALRV HHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHH AHTLRATTNGIACAVASHPVDPATLGRARGRLTVLGLGPGGAAWLTPAARAALAEATDIL HHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHH GYTTYVNMAGPFRGDQRVHGTDNREEMQRARHAFELAAEGRRVAVVSSGDPGVFAMAAAV EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH LEALDEARDPHWAAVDLRVEPGISASLATAAQAGAPLGHDFCAISLSDNLKPWDVIETRL HHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHH RHAAQADLVMAFYNPISRARPWQLDRALDVVRAHRTAETVVVLGRDIGRPGATLTTTTLG HHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEHHHHH ALRSDQVDMRTMVIVGSSTTRRFAIGNAREWVYTPRWYR HHCCCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2211521; 8226690 [H]