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The map label for this gene is vagC [H]

Identifier: 78066263

GI number: 78066263

Start: 1808495

End: 1808758

Strand: Direct

Name: vagC [H]

Synonym: Bcep18194_A4793

Alternate gene names: 78066263

Gene position: 1808495-1808758 (Clockwise)

Preceding gene: 78066262

Following gene: 78066264

Centisome position: 48.96

GC content: 67.8

Gene sequence:

>264_bases
ATGCGCACCGTTTCCATTTTCAAGAACGCTCGTAACCAGGCAATCCGCATCCCGAAGGACATGGAGTTCGAGGGGGTGAC
GGAACTCGAGATCCGCCGCGAGGGCGACACGCTGCTGCTGCGGCCCGTGCGGCCCACGTGGCTCTCGTTCGCGAGCGAAC
CGCCGGCCGACGCCGACTTCCTCGCCGAACGCCCGGCCGTCATCGAGTCCGGCCGCTTCGACCTGTCCGACGATGGCGCC
GCACCGACGGGGTCCGACCAGTGA

Upstream 100 bases:

>100_bases
CGCGACAGCATGGGGCGCGACATCCGATTTACGTGCCCTCAAATTGACATATGCCAGCATATGCCTAGAATGGGCGCATC
GTACTCCCATGGAGTGGCTC

Downstream 100 bases:

>100_bases
CCACGCTCTACATGCTCGACACGAACATCTGTTCGTTCATCATGCGCGAGCGGCCGCCCGTGGTGCTGTCGCGGTTGCAA
TCGTGCGTCAATGCGCAGCA

Product: SpoVT/AbrB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFASEPPADADFLAERPAVIESGRFDLSDDGA
APTGSDQ

Sequences:

>Translated_87_residues
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFASEPPADADFLAERPAVIESGRFDLSDDGA
APTGSDQ
>Mature_87_residues
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFASEPPADADFLAERPAVIESGRFDLSDDGA
APTGSDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 9690; Mature: 9690

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFASEPPADADF
CCCHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCH
LAERPAVIESGRFDLSDDGAAPTGSDQ
HCCCCCEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFASEPPADADF
CCCHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCH
LAERPAVIESGRFDLSDDGAAPTGSDQ
HCCCCCEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1495391 [H]