| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is iucB [H]
Identifier: 78066262
GI number: 78066262
Start: 1807229
End: 1808245
Strand: Direct
Name: iucB [H]
Synonym: Bcep18194_A4792
Alternate gene names: 78066262
Gene position: 1807229-1808245 (Clockwise)
Preceding gene: 78066261
Following gene: 78066263
Centisome position: 48.92
GC content: 68.44
Gene sequence:
>1017_bases ATGGAAGATACGCTGACGAAACCGGCCGGCGCCGCGGACGCCGTCGAAGGTGAAGTGGCCGCCGCACTCGACGGCGCCGC GCACGGGCAGGCGATGGCAGTCGTCGAGCACACGCTCGACGCGTGGCGGCCCGACGACTCGCCGGACGGTTTGCTCGCGG CGTTCGTCGCGCTGTTCAACACCGACACGCGCTACGACGCGGCGACGATCACGGTGCCGCTCGGCGGCGCCGATGCGGCG GCCGTTGCGTCGTATGTCGCGCGCGCGGTGCGCGAGGGCGTGATCGATGGCGCGCAGGTCGCCGGCGACACGCTGCGCGT CACCGTGTCGCGCGCGACGTTCTGGCAGAACCCGCGGCCGTGGCTGAAGGCGCCCGCGTCGGGCGGCATGCCGCTGCGCC ATGTGATCACGAACGGCCACCGGCACCCGGTGCGGCCGCCGTCGCCGGCCGGCGAGATCTATGCACGCTACATGCCGCAG GTCGGGATGACATTCAGCCTGCGCACCGTCGACGTCGACGCGCACGCGGACCTGTTCAGCGGCTGGATGAATCTCGATCG CGTCGCGCATTTCTGGGACCAGCGCGGCACGCGCGACGAGCACGCGGCGTATCTCGCCGAGCGGCTCGCCGATCCGCACA TGCACCCGATGATCGGCTATTTCGACGACACGCCGTTCGGCTATTTCGAGTTCTACTGGGCGAAGGAAGACCGTCTCGCG CCGTTCTACGACGCGCACGACTACGACCGCGGGCTGCACCTGCTGATCGGCGATTCGCGGTTCCAGAGCGCCGGCAAGCT GCATGCATGGTGGAGCGGGGTGCTGCACTACATGTTCGTTGACGAACCGCGCACGCAGCGTCTGGTGGGCGAACCGCGCG TCGATCACGTGCGGCATATCGCGTACATGCACCGGCTCGGGTTCTACACGCTGAAGGAGTTCGACTTCCCGCACAAGCGC GCGGCGCTCACCGTGATCGAGCGCGATACATTCTTCGACACTTTCCGGTTGCCGTGA
Upstream 100 bases:
>100_bases TTCTCGAACTGCGCTGGAACAACTTCCAGCGCAGCCTGTTTCCGGCACTCGAGCGGGGGCTGCACGTCCTCGCCGACCGC CATGACGCGGGAGCACTGTG
Downstream 100 bases:
>100_bases CGGCACGGGTGCCCGGTGCAGCGCGATGTCGCGCGCGGTGCCGTGGTCCGCGGGCATCGGCCGTCCGGGATATGGACCGC GCGGCCTGCGTCGTGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MEDTLTKPAGAADAVEGEVAAALDGAAHGQAMAVVEHTLDAWRPDDSPDGLLAAFVALFNTDTRYDAATITVPLGGADAA AVASYVARAVREGVIDGAQVAGDTLRVTVSRATFWQNPRPWLKAPASGGMPLRHVITNGHRHPVRPPSPAGEIYARYMPQ VGMTFSLRTVDVDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR AALTVIERDTFFDTFRLP
Sequences:
>Translated_338_residues MEDTLTKPAGAADAVEGEVAAALDGAAHGQAMAVVEHTLDAWRPDDSPDGLLAAFVALFNTDTRYDAATITVPLGGADAA AVASYVARAVREGVIDGAQVAGDTLRVTVSRATFWQNPRPWLKAPASGGMPLRHVITNGHRHPVRPPSPAGEIYARYMPQ VGMTFSLRTVDVDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR AALTVIERDTFFDTFRLP >Mature_338_residues MEDTLTKPAGAADAVEGEVAAALDGAAHGQAMAVVEHTLDAWRPDDSPDGLLAAFVALFNTDTRYDAATITVPLGGADAA AVASYVARAVREGVIDGAQVAGDTLRVTVSRATFWQNPRPWLKAPASGGMPLRHVITNGHRHPVRPPSPAGEIYARYMPQ VGMTFSLRTVDVDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR AALTVIERDTFFDTFRLP
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR019432 [H]
Pfam domain/function: PF10331 AlcB [H]
EC number: NA
Molecular weight: Translated: 37875; Mature: 37875
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDTLTKPAGAADAVEGEVAAALDGAAHGQAMAVVEHTLDAWRPDDSPDGLLAAFVALFN CCCCCCCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC TDTRYDAATITVPLGGADAAAVASYVARAVREGVIDGAQVAGDTLRVTVSRATFWQNPRP CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEHHHHCCCCCC WLKAPASGGMPLRHVITNGHRHPVRPPSPAGEIYARYMPQVGMTFSLRTVDVDAHADLFS CEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH GWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCC PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH AYMHRLGFYTLKEFDFPHKRAALTVIERDTFFDTFRLP HHHHHHCCHHHHHCCCCCHHHEEEEEECCCCCHHCCCC >Mature Secondary Structure MEDTLTKPAGAADAVEGEVAAALDGAAHGQAMAVVEHTLDAWRPDDSPDGLLAAFVALFN CCCCCCCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC TDTRYDAATITVPLGGADAAAVASYVARAVREGVIDGAQVAGDTLRVTVSRATFWQNPRP CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEHHHHCCCCCC WLKAPASGGMPLRHVITNGHRHPVRPPSPAGEIYARYMPQVGMTFSLRTVDVDAHADLFS CEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH GWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCC PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH AYMHRLGFYTLKEFDFPHKRAALTVIERDTFFDTFRLP HHHHHHCCHHHHHCCCCCHHHEEEEEECCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8003107 [H]