| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066227
Identifier: 78066227
GI number: 78066227
Start: 1753007
End: 1753921
Strand: Direct
Name: 78066227
Synonym: Bcep18194_A4757
Alternate gene names: NA
Gene position: 1753007-1753921 (Clockwise)
Preceding gene: 78066226
Following gene: 78066228
Centisome position: 47.45
GC content: 65.9
Gene sequence:
>915_bases ATGCCGTCCAAACACATCACCGTCGCCGCCGTCCAGATGGCGTCGGGCAACTGGAATCTCGAAGACAACATGGCCACCGC GGAGCGCCTGATCCGCGCGGCCGCCGCACAGGGCGCGAATCTCGTGCTGTGCCCGGAGCTGTTCGCGATGCCGTACTTCT GCCTCGACCAGAACGTGCGCCATCTCGAACTTGCGCAGCCGTTCGAAGGCAATGCGCAGATCGCCCGTTTCGCGGCGCTG GCCGGCGAACTCGGCATCGTGCTGCCGATCGGCTTCTTCGAGCGCGCGGGCAATGCCGCGTACAACTCGATCGCCGTCGC GGACGCGGACGGGCGCGTGCTCGGCGTCTATCGCAAGACGCATATCCCGGATGGGCCGGGCTATACGGAGAAGTTCTATT TCACGCCGGGCGACACCGGCTTCAAGGTGTGGGATACGCGCTTCGGCCGAATCGGCATCGGCATCTGCTGGGACCAGTGG TATCCGGAAACCGCACGCAGCCTCGCGCTGATGGGCGCCGAGATCCTGTGCTTTCCGACCATCATCGGCTCGGAGCCGTT CAGCAGTGCGTTCGATTCGTCCGGCCACTGGCAGCGCACGATGCAGGGCCACGCGGCCGCCAACATGGTGCCGGTGGTGG CCGCGAACCGGATCGGCCGCGAAGTCGGCTTCGGCAACGGCAATCCGGAGCAGCAGGGGCTCACGGGCGTGTTCTACGGG TCGAGCTTCATCGCGGATCACACCGGCGAGAAGCGGGCCGAGGCGAACCGCACCGACGAAGCCGTGCTCGTGCACACGTT CGATCTCGACGCGATCCGCGCCGACCGGCAATCGTGGGGCTTTTTCCGCGATCGCCGCCCGGAGATGTATCGCACGTTGC TGACCAGCGACGGCGTATCGTCCTGTTATCGATGA
Upstream 100 bases:
>100_bases GGCGGCGGCAGCATCCACTGTTCGACGCAGCAACAGCCGTCCGTCGCGAACTGAGCGACGTTTCGTCAGCGGTTTCCGGT CCTACCGAGGAGCAATCGCA
Downstream 100 bases:
>100_bases GGAAGGCCCGATGAAACGGAAAGGATGGTTGCGCTTCGCGGTGCCGGGCCTCGCGCTGTGCATGCTGGCCGGCATGGCCC GCGCCGATGAAGAGAAGGTG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPSKHITVAAVQMASGNWNLEDNMATAERLIRAAAAQGANLVLCPELFAMPYFCLDQNVRHLELAQPFEGNAQIARFAAL AGELGIVLPIGFFERAGNAAYNSIAVADADGRVLGVYRKTHIPDGPGYTEKFYFTPGDTGFKVWDTRFGRIGIGICWDQW YPETARSLALMGAEILCFPTIIGSEPFSSAFDSSGHWQRTMQGHAAANMVPVVAANRIGREVGFGNGNPEQQGLTGVFYG SSFIADHTGEKRAEANRTDEAVLVHTFDLDAIRADRQSWGFFRDRRPEMYRTLLTSDGVSSCYR
Sequences:
>Translated_304_residues MPSKHITVAAVQMASGNWNLEDNMATAERLIRAAAAQGANLVLCPELFAMPYFCLDQNVRHLELAQPFEGNAQIARFAAL AGELGIVLPIGFFERAGNAAYNSIAVADADGRVLGVYRKTHIPDGPGYTEKFYFTPGDTGFKVWDTRFGRIGIGICWDQW YPETARSLALMGAEILCFPTIIGSEPFSSAFDSSGHWQRTMQGHAAANMVPVVAANRIGREVGFGNGNPEQQGLTGVFYG SSFIADHTGEKRAEANRTDEAVLVHTFDLDAIRADRQSWGFFRDRRPEMYRTLLTSDGVSSCYR >Mature_303_residues PSKHITVAAVQMASGNWNLEDNMATAERLIRAAAAQGANLVLCPELFAMPYFCLDQNVRHLELAQPFEGNAQIARFAALA GELGIVLPIGFFERAGNAAYNSIAVADADGRVLGVYRKTHIPDGPGYTEKFYFTPGDTGFKVWDTRFGRIGIGICWDQWY PETARSLALMGAEILCFPTIIGSEPFSSAFDSSGHWQRTMQGHAAANMVPVVAANRIGREVGFGNGNPEQQGLTGVFYGS SFIADHTGEKRAEANRTDEAVLVHTFDLDAIRADRQSWGFFRDRRPEMYRTLLTSDGVSSCYR
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI5031947, Length=303, Percent_Identity=29.042904290429, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI297632348, Length=303, Percent_Identity=29.042904290429, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI297632350, Length=303, Percent_Identity=29.042904290429, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI7706509, Length=284, Percent_Identity=29.5774647887324, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI9910460, Length=300, Percent_Identity=29.6666666666667, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI297632346, Length=208, Percent_Identity=30.2884615384615, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17533173, Length=278, Percent_Identity=33.4532374100719, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17556280, Length=295, Percent_Identity=27.1186440677966, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323383, Length=303, Percent_Identity=26.7326732673267, Blast_Score=102, Evalue=1e-22, Organism=Drosophila melanogaster, GI21358471, Length=273, Percent_Identity=31.8681318681319, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI17933642, Length=289, Percent_Identity=25.6055363321799, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 33387; Mature: 33256
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKHITVAAVQMASGNWNLEDNMATAERLIRAAAAQGANLVLCPELFAMPYFCLDQNVR CCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHCCCHHHCCCCC HLELAQPFEGNAQIARFAALAGELGIVLPIGFFERAGNAAYNSIAVADADGRVLGVYRKT EEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCEEEEECCCCCEEEEEEEC HIPDGPGYTEKFYFTPGDTGFKVWDTRFGRIGIGICWDQWYPETARSLALMGAEILCFPT CCCCCCCCCCEEEECCCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEE IIGSEPFSSAFDSSGHWQRTMQGHAAANMVPVVAANRIGREVGFGNGNPEQQGLTGVFYG HHCCCCCHHHHCCCCCHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC SSFIADHTGEKRAEANRTDEAVLVHTFDLDAIRADRQSWGFFRDRRPEMYRTLLTSDGVS CCEEECCCCCHHHHCCCCCCEEEEEEECCHHHHHCHHHCCCHHCCCHHHHHHHHHCCCHH SCYR HHCC >Mature Secondary Structure PSKHITVAAVQMASGNWNLEDNMATAERLIRAAAAQGANLVLCPELFAMPYFCLDQNVR CCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHCCCHHHCCCCC HLELAQPFEGNAQIARFAALAGELGIVLPIGFFERAGNAAYNSIAVADADGRVLGVYRKT EEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCEEEEECCCCCEEEEEEEC HIPDGPGYTEKFYFTPGDTGFKVWDTRFGRIGIGICWDQWYPETARSLALMGAEILCFPT CCCCCCCCCCEEEECCCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEE IIGSEPFSSAFDSSGHWQRTMQGHAAANMVPVVAANRIGREVGFGNGNPEQQGLTGVFYG HHCCCCCHHHHCCCCCHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC SSFIADHTGEKRAEANRTDEAVLVHTFDLDAIRADRQSWGFFRDRRPEMYRTLLTSDGVS CCEEECCCCCHHHHCCCCCCEEEEEEECCHHHHHCHHHCCCHHCCCHHHHHHHHHCCCHH SCYR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]