| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is echA8 [H]
Identifier: 78066172
GI number: 78066172
Start: 1697001
End: 1698164
Strand: Direct
Name: echA8 [H]
Synonym: Bcep18194_A4702
Alternate gene names: 78066172
Gene position: 1697001-1698164 (Clockwise)
Preceding gene: 78066171
Following gene: 78066174
Centisome position: 45.94
GC content: 68.3
Gene sequence:
>1164_bases ATGACCCTCATGACCGATTCCACTTCCGCTGCCGTTTCCGCCGAATCCACTCAGCCCGATGTACGCGCGTATGTCGCGAA CCGCATCGGCTTTCTCGAACTGAACCGGCCGAAGGCGCTGAACGCGCTGTCGGTCGGCATGATCCGGCTGATGCAGCAGG CGCTCGACGCGTGGCGCGACGATCCCGAGGTCGTCGCGGTCGTCGTGCACAGCCCGCATCCGCGCGCGTTCTGCGCGGGC GGCGACGTGCGCTTCTTCCACGATGCGTGGCAGCGCGGCGACCGCGATGCGGTCGACACGTTCTTCATCGAGGAATACAC GCTCAACCACACGATCTTCGCGTATCCGAAGCCCTATATCGCGCTGATGCACGGCGTCGTGATGGGCGGTGGCATGGGGA TTTCGCAGGCGGCGCGGCATACGGGCGGCCTGCGTGTCGTGACCGACTCGACGAAGATGGCGATGCCGGAAACGCGTATC GGCCTGTTCCCGGACGTCGGGATGAGCTGGTTCCTCGCGCGCACGCCGGGTGCGATCGGCCGCTATCTCGCGGTGACCGG CGCGACGCTCGACGCGGCCGGCGCGCTGTACGCGCAGCTCGCCGACGTCTATCTGCCCGATGCCGCACTGCCGGCGCTGC TCGATACGCTGCGCAGCGCGCGTATCGACAGCGGCGAGCAGGCCGTTGCGTGCGTGGCCGAGGCAGCCGCCGCGCACAAG GTCGTGCCGACCCCCGACACGTCGGCGCTGGCCGACGCGCGTACCGGGATCGACCGGCATTTCGCGCAGCCGGACATCGG CGCGATCCTCGCGTCGCTCGACGCCGACCAGGATTGCGCGGCCGTCGACGGATGGATCGAGAAGGCGACCCATGCGATGC GCGAACAGTTGTCGCCGTTGTCGATGGCCGTGTCGCTGGAAGTCGTCGAACGCGCACGCGGCGCAACGATGGCCGACTGC CTGCGGCGCGATCTCGATCTCACGCGCTCGACGTTCGCGCGCGGCGACGTGATCGAAGGCGTGCGCGCGCTGATCGTCGA CAAGGACCACCAGCCGGTCTGGCGCTTCAAGTCGTCCGCCGATATCGATCGCGCGGACGTGCTCGCGATGTTCGACAGCC CGTGGGCGCCGGACACGCATCCGCTGCGGAATCTGCAGGACTGA
Upstream 100 bases:
>100_bases CCGGCCGTGATCGGCCTCGGCCTGATCGTCGCCGGCGTCGTGGTGTTGAACCTGTTTTCGAAGATGCAGGCGCACTGAGC GTGCGACTGCCATTTGCCGG
Downstream 100 bases:
>100_bases CGCCGGTCGGACTGACCGAAGCGCGAGCTGGAAACGAAAAGGCCGCCTGCACATGCAGGCGGCCTTTTTCATGGATGTCG ACCGGTTTGGGGGCGACGAG
Product: 3-hydroxyisobutyryl-CoA hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTLMTDSTSAAVSAESTQPDVRAYVANRIGFLELNRPKALNALSVGMIRLMQQALDAWRDDPEVVAVVVHSPHPRAFCAG GDVRFFHDAWQRGDRDAVDTFFIEEYTLNHTIFAYPKPYIALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRI GLFPDVGMSWFLARTPGAIGRYLAVTGATLDAAGALYAQLADVYLPDAALPALLDTLRSARIDSGEQAVACVAEAAAAHK VVPTPDTSALADARTGIDRHFAQPDIGAILASLDADQDCAAVDGWIEKATHAMREQLSPLSMAVSLEVVERARGATMADC LRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFKSSADIDRADVLAMFDSPWAPDTHPLRNLQD
Sequences:
>Translated_387_residues MTLMTDSTSAAVSAESTQPDVRAYVANRIGFLELNRPKALNALSVGMIRLMQQALDAWRDDPEVVAVVVHSPHPRAFCAG GDVRFFHDAWQRGDRDAVDTFFIEEYTLNHTIFAYPKPYIALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRI GLFPDVGMSWFLARTPGAIGRYLAVTGATLDAAGALYAQLADVYLPDAALPALLDTLRSARIDSGEQAVACVAEAAAAHK VVPTPDTSALADARTGIDRHFAQPDIGAILASLDADQDCAAVDGWIEKATHAMREQLSPLSMAVSLEVVERARGATMADC LRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFKSSADIDRADVLAMFDSPWAPDTHPLRNLQD >Mature_386_residues TLMTDSTSAAVSAESTQPDVRAYVANRIGFLELNRPKALNALSVGMIRLMQQALDAWRDDPEVVAVVVHSPHPRAFCAGG DVRFFHDAWQRGDRDAVDTFFIEEYTLNHTIFAYPKPYIALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRIG LFPDVGMSWFLARTPGAIGRYLAVTGATLDAAGALYAQLADVYLPDAALPALLDTLRSARIDSGEQAVACVAEAAAAHKV VPTPDTSALADARTGIDRHFAQPDIGAILASLDADQDCAAVDGWIEKATHAMREQLSPLSMAVSLEVVERARGATMADCL RRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFKSSADIDRADVLAMFDSPWAPDTHPLRNLQD
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=349, Percent_Identity=32.378223495702, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI37594469, Length=301, Percent_Identity=32.5581395348837, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI194097323, Length=221, Percent_Identity=30.316742081448, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI221142681, Length=231, Percent_Identity=26.8398268398268, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25144160, Length=354, Percent_Identity=36.4406779661017, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI25144157, Length=384, Percent_Identity=35.4166666666667, Blast_Score=192, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320241, Length=211, Percent_Identity=36.4928909952607, Blast_Score=119, Evalue=9e-28, Organism=Drosophila melanogaster, GI28571729, Length=379, Percent_Identity=34.5646437994723, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI28571730, Length=379, Percent_Identity=34.5646437994723, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24653139, Length=245, Percent_Identity=29.3877551020408, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 41852; Mature: 41721
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMTDSTSAAVSAESTQPDVRAYVANRIGFLELNRPKALNALSVGMIRLMQQALDAWRD CCEECCCCCCEEECCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC DPEVVAVVVHSPHPRAFCAGGDVRFFHDAWQRGDRDAVDTFFIEEYTLNHTIFAYPKPYI CCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCHHHHHEEEEEEECCEEEECCCHHH ALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRIGLFPDVGMSWFLARTPGAIG HHHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEECCCCCHHH RYLAVTGATLDAAGALYAQLADVYLPDAALPALLDTLRSARIDSGEQAVACVAEAAAAHK HHHEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC VVPTPDTSALADARTGIDRHFAQPDIGAILASLDADQDCAAVDGWIEKATHAMREQLSPL CCCCCCCHHHHHHHHCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH SMAVSLEVVERARGATMADCLRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFKSSA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCHHHCCCCC DIDRADVLAMFDSPWAPDTHPLRNLQD CCCHHHEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TLMTDSTSAAVSAESTQPDVRAYVANRIGFLELNRPKALNALSVGMIRLMQQALDAWRD CEECCCCCCEEECCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC DPEVVAVVVHSPHPRAFCAGGDVRFFHDAWQRGDRDAVDTFFIEEYTLNHTIFAYPKPYI CCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCHHHHHEEEEEEECCEEEECCCHHH ALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRIGLFPDVGMSWFLARTPGAIG HHHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEECCCCCHHH RYLAVTGATLDAAGALYAQLADVYLPDAALPALLDTLRSARIDSGEQAVACVAEAAAAHK HHHEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC VVPTPDTSALADARTGIDRHFAQPDIGAILASLDADQDCAAVDGWIEKATHAMREQLSPL CCCCCCCHHHHHHHHCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH SMAVSLEVVERARGATMADCLRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFKSSA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCHHHCCCCC DIDRADVLAMFDSPWAPDTHPLRNLQD CCCHHHEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]