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The map label for this gene is rpiA [H]

Identifier: 78066161

GI number: 78066161

Start: 1687831

End: 1688526

Strand: Direct

Name: rpiA [H]

Synonym: Bcep18194_A4691

Alternate gene names: 78066161

Gene position: 1687831-1688526 (Clockwise)

Preceding gene: 78066160

Following gene: 78066162

Centisome position: 45.69

GC content: 66.38

Gene sequence:

>696_bases
ATGACTCAAGACGAACTCAAACGCCTCGTCGGCCAGGCCGCCGCTGATTACGTGATCCAGAACGTGCCGGAAGGCGCCGT
GATCGGCGTCGGCACCGGCTCGACTGCCAACTGCTTCATCGACGCGCTCGCCGTCGTCAAGGCCCGCTATCGCGGCGCCG
TATCGAGCTCCGTCGCCACGACCGAACGCCTGAAGTCGCACGGCATCAAGGTGTTCGACCTGAACGAGGTCGACTCGCTG
CAGGTGTATGTCGACGGCGCCGACGAGATCGACGCGAGCGGCGCGATGATCAAGGGCGGTGGCGGCGCGCTGACGCGCGA
GAAGATCGTCGCGTCGGTGGCCGATACGTTCGTCTGCATCGCGGACGCCAGCAAGCGCGTGCCGGTGCTCGGCGCGTTCC
CGCTGCCGATCGAAGTCGTGCCGATGGCGCGCACGGCGATCGGCCGGCGCGTGACCGCCCTCGGCGGCGTGCCGGTGCTG
CGCGTGACGAAGGACGGTGCGCCCTACATCACCGACAACGGCAACGAGATCATCGACGTGAAGGGGCTGCAGATCGCCGA
TCCGCGTGGTTTCGAAGCGCAGGTGAACGCATGGCCGGGCGTCGTGACGGTCGGCCTGTTCGCCGAGCGCGGCGCGAATC
TGTGCTTGCTCGGCACGGAAAACGGCGTTGAAACGATCGTTTATTCGGCTAATTGA

Upstream 100 bases:

>100_bases
CGCCCTGAGTCCACAGCGCACGGCACCCCGAAAAACGCGGGGCGGTCATCCGAGTCCGGTAAACTGGCGGTTTTCCGCAA
TCCCGCAGCATTACCACTCC

Downstream 100 bases:

>100_bases
AAGATACGACAAGCAGTCCGTAATGACGTGTCACATGTCGTAATGGACTGAATGTTTAAATCTTGTGGAAATCGGGGCCC
GGTAGGCGCAATGCGCTTCC

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAVVKARYRGAVSSSVATTERLKSHGIKVFDLNEVDSL
QVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVL
RVTKDGAPYITDNGNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVETIVYSAN

Sequences:

>Translated_231_residues
MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAVVKARYRGAVSSSVATTERLKSHGIKVFDLNEVDSL
QVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVL
RVTKDGAPYITDNGNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVETIVYSAN
>Mature_230_residues
TQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAVVKARYRGAVSSSVATTERLKSHGIKVFDLNEVDSLQ
VYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVLR
VTKDGAPYITDNGNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVETIVYSAN

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=221, Percent_Identity=36.6515837104072, Blast_Score=113, Evalue=1e-25,
Organism=Escherichia coli, GI1789280, Length=227, Percent_Identity=62.1145374449339, Blast_Score=270, Evalue=5e-74,
Organism=Caenorhabditis elegans, GI17551758, Length=200, Percent_Identity=38, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6324669, Length=237, Percent_Identity=27.0042194092827, Blast_Score=84, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281364072, Length=209, Percent_Identity=35.4066985645933, Blast_Score=98, Evalue=5e-21,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 24014; Mature: 23883

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAVVKARYRGAVSSSVAT
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
TERLKSHGIKVFDLNEVDSLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCI
HHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEE
ADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDV
ECCCCCCCEEECCCCCEEEECHHHHHHCCEEEECCCCEEEEEECCCCCEEECCCCEEEEE
KGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVETIVYSAN
CCEEEECCCCCEEEECCCCCEEEEEEHHHCCCCEEEEECCCCCEEEEEECC
>Mature Secondary Structure 
TQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAVVKARYRGAVSSSVAT
CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
TERLKSHGIKVFDLNEVDSLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCI
HHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEE
ADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDV
ECCCCCCCEEECCCCCEEEECHHHHHHCCEEEECCCCEEEEEECCCCCEEECCCCEEEEE
KGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVETIVYSAN
CCEEEECCCCCEEEECCCCCEEEEEEHHHCCCCEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA