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The map label for this gene is rimP [H]

Identifier: 78066109

GI number: 78066109

Start: 1621625

End: 1622083

Strand: Direct

Name: rimP [H]

Synonym: Bcep18194_A4639

Alternate gene names: 78066109

Gene position: 1621625-1622083 (Clockwise)

Preceding gene: 78066108

Following gene: 78066110

Centisome position: 43.9

GC content: 58.39

Gene sequence:

>459_bases
GTGCAACTGACGGAACTGATAGAAACCACGGTCACCGGGCTCGGCTACGAGCTGGTGGATCTCGAGCGCACCGGGCGCGG
CATGCTTTGCATCTATATCGATCAGCCTGCCGGCATCTCGCTCGAAGATTGCGAAAAGGTCACGCGTCAGCTCCAGCACG
TCTTGACGGTCGAAAACATCGATTACGAACGGCTCGAAGTCTCGTCCCCGGGGCTCGACCGCCCGTTGAAGAAGCTGGCC
GACTTCGAGCGCTTCGCTGGCAGCGAAGTTTCCGTGACCTTGAAAAAGCCGCTGGACGGGCGCAAGACGTACCGGGGCAT
TCTGCACGCGCCGAATGGCGAAACGATCGGTTTGGAATTTGAGGGGAAGAAGGGCGAGGCAGCCATGCTGGATTTCACGC
TGGCCGATATCGATAAAGCCCGCCTGATTCCGCAAGTTGACTTTAGGAGCCGCAAATAA

Upstream 100 bases:

>100_bases
TGAAACGGTTAGGCATCTCGGGTAGCGCTTCCTGCGCCGGCTAAGGCGCGCGCCCGCGGGTGAATCGCGAGCGGCGGGCG
CGAACACCTGAGAGGACACA

Downstream 100 bases:

>100_bases
TGAGTCGCGAAGTGTTGATGCTGGTGGATGCGCTGGCGCGCGAGAAAAACGTCGACAAGGATGTGGTGCTGGGCGCCCTC
GAGGCTGCGCTCGCGTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQPAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLADIDKARLIPQVDFRSRK

Sequences:

>Translated_152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQPAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLADIDKARLIPQVDFRSRK
>Mature_152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQPAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLADIDKARLIPQVDFRSRK

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=149, Percent_Identity=41.6107382550336, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17054; Mature: 17054

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQPAGISLEDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEF
CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
EGKKGEAAMLDFTLADIDKARLIPQVDFRSRK
ECCCCCEEEEEEEHHCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQPAGISLEDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEF
CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
EGKKGEAAMLDFTLADIDKARLIPQVDFRSRK
ECCCCCEEEEEEEHHCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA