Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78065987

Identifier: 78065987

GI number: 78065987

Start: 1480801

End: 1481625

Strand: Direct

Name: 78065987

Synonym: Bcep18194_A4516

Alternate gene names: NA

Gene position: 1480801-1481625 (Clockwise)

Preceding gene: 78065986

Following gene: 78065990

Centisome position: 40.09

GC content: 65.94

Gene sequence:

>825_bases
ATGACAGTCCCGCACCGGAACAAACGTCTGAAGCCGCTTGCGGCTTCGCTCGCCGCACTTGGCGCACTCGCGGTGCTGAC
CGCACTTTCCGCGATGTCACCTGTCTATGCGGCCGAGCCGGTCCAGCCTGACCATCAACTGAAAACCTTCATCCACGACA
CTTATGGCAAGTGGCGTGCGGACCGCAAGGGCTGGCAGGCGGACGGGGACGATCTGATCTATGCGCCATGCGGTTCGGTG
CGCGTCGCGACCGCGGATGGCCCGCGCACGCTACTCGCGATGTGCGGCGAGACCGAGGCGGCGGTGCAGAACGGGATGCC
GGGGATGGATTCGGACGCGACGACCGGCACGATCGACCTGTACGTGCTGAAACCAACGGCGGACGGCAGGACGCTCGAAC
CGGTGGTGAAGAAGACGGAGATCGCGTCGGGCAAGCGAGGCGAACCGGGCACCGTGCGCATCGAGCGGTACGGCCCGCAC
CTGTTCGGCTTCACGATCGGCGACGGCGTCACGCTGCAGGGCTACACGATGGCGATGCGGTCGATCTGGCTGCCGATTGG
CAATGCGATCGTCGAGGCGGCGCCGCGCATCAACGAATCGCTCGACAACACGGGCTCGCTCGATTGCGGGAACGCGAAAT
CGCATTGCGAGAGCCGGACGTTCACGATCGTGCCCGACACGACCGGCACCGGCGACGTCTATCCGCTGACCGTCACGGAA
ACGGGCACGCGCGGCGACAAGGACATCCGCGCGCGCTATACGGTGAAGTTCGACGCGGCGCGTGGCCGCTACGTCGTGCC
GAAGGCATTGCGCGAAGGGTACTGA

Upstream 100 bases:

>100_bases
GGCTGAAGCCGGACGGCACCGGCATCGCGCCACGGCAGCCGTGATCGTGCGGGCCCGCCACCATTCGCTACACACCTTTT
CGACCTGAACGATCCTCGTC

Downstream 100 bases:

>100_bases
TCCTTCGCGCACCGGAACGGGCGGCGTTGCGCCGCCCGCGCATCACACGTACAGATACCGCACGAGGTGGAAGAACACCG
GCGCGGCGAAGCAGATCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRADRKGWQADGDDLIYAPCGSV
RVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDLYVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPH
LFGFTIGDGVTLQGYTMAMRSIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE
TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY

Sequences:

>Translated_274_residues
MTVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRADRKGWQADGDDLIYAPCGSV
RVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDLYVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPH
LFGFTIGDGVTLQGYTMAMRSIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE
TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY
>Mature_273_residues
TVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRADRKGWQADGDDLIYAPCGSVR
VATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDLYVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPHL
FGFTIGDGVTLQGYTMAMRSIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTET
GTRGDKDIRARYTVKFDAARGRYVVPKALREGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29444; Mature: 29313

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DRKGWQADGDDLIYAPCGSVRVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDL
CCCCCCCCCCCEEEECCCCEEEEECCCCCEEHHHCCCCHHHHHCCCCCCCCCCCCCEEEE
YVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPHLFGFTIGDGVTLQGYTMAMR
EEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCEEECHHHHHHH
SIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE
HHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEEEEEC
TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY
CCCCCCCCEEEEEEEEEECCCCCEECHHHHHCCC
>Mature Secondary Structure 
TVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DRKGWQADGDDLIYAPCGSVRVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDL
CCCCCCCCCCCEEEECCCCEEEEECCCCCEEHHHCCCCHHHHHCCCCCCCCCCCCCEEEE
YVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPHLFGFTIGDGVTLQGYTMAMR
EEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCEEECHHHHHHH
SIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE
HHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEEEEEC
TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY
CCCCCCCCEEEEEEEEEECCCCCEECHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA