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The map label for this gene is 78065971

Identifier: 78065971

GI number: 78065971

Start: 1465144

End: 1466304

Strand: Reverse

Name: 78065971

Synonym: Bcep18194_A4500

Alternate gene names: NA

Gene position: 1466304-1465144 (Counterclockwise)

Preceding gene: 78065977

Following gene: 78065970

Centisome position: 39.69

GC content: 66.24

Gene sequence:

>1161_bases
ATGAAACGCACGACCCTCTCTCTGATTTCCATCGCTTCATTCGCGGCGATACCCGTCGCGCATGCGCAGTCGAGCGTCAC
GCTGTATGGCGTAATCGACACGTCGATCACCTACGTGAACCATGCGCAGGGCAAGGACAACGCGTGGATGCTCGGCAACA
GCAGCGCGGGCAACCTCGCCGGCAGCCGCTGGGGCGTGAAAGGCACCGAGGATCTCGGCGGCGGGCTGAAGGCGCTGTTC
CAGCTCGAGAACGGTTTCGACCCGAGCAACGGCCGGATGGGCCAGGGCAGCCGCATGTTCGGCCGGCAGGCGTTCGTCGG
CCTGACGAGCGACCGCTACGGCACGCTCACGTTCGGCCGCCAGTACGATCCGCTCATCGATCTCGTGCAAGGCATCACCG
CCGACAACTATCTCGGCAGCGTGTTCGCGACGGCGGGCGACGTCGACAACTACGACAACAGCTTCCGCGTCGACAACGCG
GTGAAGTACACGTCGGCCGTCTATTCGGGCCTGCAGTTCTCGGCGATGTACTCGTTCGGCGGCATCGCCGGGAGCACCGG
CGCCGCGAATTCGTATTCGGCCGCCGTGTCGTACAACAACGGGCCGTTCAGCGTCGCGGGCGGCTACTTCCACACGACCA
ACAGCCCCGCGTCGAACACCCAGCGCAGCGGCTGGACCAGCTCGTCGGACGGCACGTTCGACGGCCCGGTCAACAGCGGC
TATGCGAGCGCGCATTCGATCGGCATCGCGCGCATCGCGGGCCAGTACGTCGCCGGCCCGTTCACGTTCGGCCTCGGCTA
CAGCAACGCGCAGTACCGCCGCGATGGAAGCTCGGTGTTCGGCTCGAACGAGCACTACAACACGGGGCAAGGCTTCGTGA
ACTACCAGGCGACCAATGCGCTGCTGGTCGGCGTCGGCTACAGCTATACGCGCTCGGGCGGCGACACGTCGGCCACCTAT
CACCAGGTATCGGCCGGCGCGGACTACAACCTGTCGAAGCGCACCGACGTCTACCTGACCGCCGCGTACCAGCACGCAAG
CGGCCAGACCGGCGACGGCAAGGGCGGCTCGATGGCCGCGCAGGCGTCGATCGGTTCGTACGGCTATGCCGGCACGAGCT
CGCAGACGATGGTCAACCTCGGCCTGCGCCACCGCTTCTGA

Upstream 100 bases:

>100_bases
CAGGCCACAAAAGAGAATTTCATTTTTGTCGTTTTAATCGGGCTCGGTAGTCTCCTGCCATTCCGGATCACGAACACAAG
CCAATGCGCAAGGAGATGAC

Downstream 100 bases:

>100_bases
TGCAAAACGGCCGGCTGCGCGACACGCGGCCGGTCGAATCCGCATTCACCGGTACGGCGGCTTCGGCCGCCGTTGTTTTT
GAATCGCCTTTCCGTCGCCC

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKRTTLSLISIASFAAIPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLAGSRWGVKGTEDLGGGLKALF
QLENGFDPSNGRMGQGSRMFGRQAFVGLTSDRYGTLTFGRQYDPLIDLVQGITADNYLGSVFATAGDVDNYDNSFRVDNA
VKYTSAVYSGLQFSAMYSFGGIAGSTGAANSYSAAVSYNNGPFSVAGGYFHTTNSPASNTQRSGWTSSSDGTFDGPVNSG
YASAHSIGIARIAGQYVAGPFTFGLGYSNAQYRRDGSSVFGSNEHYNTGQGFVNYQATNALLVGVGYSYTRSGGDTSATY
HQVSAGADYNLSKRTDVYLTAAYQHASGQTGDGKGGSMAAQASIGSYGYAGTSSQTMVNLGLRHRF

Sequences:

>Translated_386_residues
MKRTTLSLISIASFAAIPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLAGSRWGVKGTEDLGGGLKALF
QLENGFDPSNGRMGQGSRMFGRQAFVGLTSDRYGTLTFGRQYDPLIDLVQGITADNYLGSVFATAGDVDNYDNSFRVDNA
VKYTSAVYSGLQFSAMYSFGGIAGSTGAANSYSAAVSYNNGPFSVAGGYFHTTNSPASNTQRSGWTSSSDGTFDGPVNSG
YASAHSIGIARIAGQYVAGPFTFGLGYSNAQYRRDGSSVFGSNEHYNTGQGFVNYQATNALLVGVGYSYTRSGGDTSATY
HQVSAGADYNLSKRTDVYLTAAYQHASGQTGDGKGGSMAAQASIGSYGYAGTSSQTMVNLGLRHRF
>Mature_386_residues
MKRTTLSLISIASFAAIPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLAGSRWGVKGTEDLGGGLKALF
QLENGFDPSNGRMGQGSRMFGRQAFVGLTSDRYGTLTFGRQYDPLIDLVQGITADNYLGSVFATAGDVDNYDNSFRVDNA
VKYTSAVYSGLQFSAMYSFGGIAGSTGAANSYSAAVSYNNGPFSVAGGYFHTTNSPASNTQRSGWTSSSDGTFDGPVNSG
YASAHSIGIARIAGQYVAGPFTFGLGYSNAQYRRDGSSVFGSNEHYNTGQGFVNYQATNALLVGVGYSYTRSGGDTSATY
HQVSAGADYNLSKRTDVYLTAAYQHASGQTGDGKGGSMAAQASIGSYGYAGTSSQTMVNLGLRHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40397; Mature: 40397

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTTLSLISIASFAAIPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLA
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEEEECCCCCCCEEEEECCCCCCCC
GSRWGVKGTEDLGGGLKALFQLENGFDPSNGRMGQGSRMFGRQAFVGLTSDRYGTLTFGR
CCCCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEEECCCCCEEEEECC
QYDPLIDLVQGITADNYLGSVFATAGDVDNYDNSFRVDNAVKYTSAVYSGLQFSAMYSFG
CCCHHHHHHHCCCCCCHHHHHHEECCCCCCCCCCEECCCHHHHHHHHHCCCEEEEEHHCC
GIAGSTGAANSYSAAVSYNNGPFSVAGGYFHTTNSPASNTQRSGWTSSSDGTFDGPVNSG
CCCCCCCCCCCEEEEEEECCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YASAHSIGIARIAGQYVAGPFTFGLGYSNAQYRRDGSSVFGSNEHYNTGQGFVNYQATNA
CCHHHHHHHHHHHCCHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCE
LLVGVGYSYTRSGGDTSATYHQVSAGADYNLSKRTDVYLTAAYQHASGQTGDGKGGSMAA
EEEECCCEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEE
QASIGSYGYAGTSSQTMVNLGLRHRF
EECCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKRTTLSLISIASFAAIPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLA
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEEEECCCCCCCEEEEECCCCCCCC
GSRWGVKGTEDLGGGLKALFQLENGFDPSNGRMGQGSRMFGRQAFVGLTSDRYGTLTFGR
CCCCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEEECCCCCEEEEECC
QYDPLIDLVQGITADNYLGSVFATAGDVDNYDNSFRVDNAVKYTSAVYSGLQFSAMYSFG
CCCHHHHHHHCCCCCCHHHHHHEECCCCCCCCCCEECCCHHHHHHHHHCCCEEEEEHHCC
GIAGSTGAANSYSAAVSYNNGPFSVAGGYFHTTNSPASNTQRSGWTSSSDGTFDGPVNSG
CCCCCCCCCCCEEEEEEECCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YASAHSIGIARIAGQYVAGPFTFGLGYSNAQYRRDGSSVFGSNEHYNTGQGFVNYQATNA
CCHHHHHHHHHHHCCHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCE
LLVGVGYSYTRSGGDTSATYHQVSAGADYNLSKRTDVYLTAAYQHASGQTGDGKGGSMAA
EEEECCCEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEE
QASIGSYGYAGTSSQTMVNLGLRHRF
EECCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]