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The map label for this gene is yvrC [H]

Identifier: 78065962

GI number: 78065962

Start: 1457154

End: 1458170

Strand: Direct

Name: yvrC [H]

Synonym: Bcep18194_A4491

Alternate gene names: 78065962

Gene position: 1457154-1458170 (Clockwise)

Preceding gene: 78065961

Following gene: 78065963

Centisome position: 39.45

GC content: 70.3

Gene sequence:

>1017_bases
ATGACCGCCATGCCGTTTCCCTTGTTGTCCTCCGCTTTGTCGTCCGCTTTATTGCCGGTATCCCGCCGGCTGCTTGCCGC
GGCCGTGCTCGGCTGCGCGGCCGCTCAGGCGGCGGCCTATCCCGTCACCGTGCGCAGTTGCGATCGCGACGTGACGTTCG
AGCGCGCGCCGACGCGTGCGGTGAGCAACGACGTGAACCTGACCGAGATGATGCTCGTGCTCGGCCTGAAGGACCGGCTC
GTCGGCTACACCGGGATCGGCGGCTGGAAGACGGGCACGGCACGCGTGCGCGATGCGCTGCGCGGCGTACCCGAACTGGC
AAGCCAGTATCCGTCGCTCGAGGTGCTCGCGGCCGCGCGCGCCGACTTCTATCTCGCGGGATGGAACTACGGGATGCATG
TCGGCGGCGCGGTGACGCCCGCGACGCTCGCGCCGTTCGGTATCCGCACGTACGAGCTGACCGAATCGTGTTCGCACGTG
ATGAAGCAGTCGGCGGCCTCGTTCGACGACGTGTTCCGCGACCTGAACAATCTCGGCCGGATCTTCGGCGTCGACGCGCG
CGCCGCGCAGGTCGTCGGCGCGATGCGTGCGCGTCTCGCGGCGGTGTCGCGTGCGATCGGGCATCCGGCGCCGCTGCGCG
TGTTTGTCTACGACAGCGGCACCGACAAGCCGATGACGGCCGGCGGGCTCGCGATGCCGACCGCGCTGCTGACGGCGGCC
GGGGCGCGCAACGTGATGGCCGACCTGCCGCGCAGCTGGACGCAGGTGAGCTGGGAAAGCGTGGTTGCGCGCGATCCGCA
GGTGATCGTGATCGTCGACTATTCGGCCGTGACGGCCGCGCAGAAGCAGCAGTTCCTGCTGAGCCAGCCGTCGCTCGCGC
GCGTGGCCGCGATCCGCGACCGGCGCTTCATCGTGATTCCGTACGATGCGGCGACGCCGGGCCCCGAGAACGTCGCGGCC
GTCGAGACGCTCGCGCGCGCGCTGTATCCGGCCGCGTTCGCGGGGCCGGCGCGATGA

Upstream 100 bases:

>100_bases
TGCTGACCGACGCGCTGCTGCGCGACGTGTTCGGCGTCGCCGCGCTCGTCGATCGCCATCCCGTCACGGGCCGGCCGCGC
ATCACGCCGCTTCATCCGGA

Downstream 100 bases:

>100_bases
GCGTGCACGTGCGTGCATCGCGGCCCGGCATGCGCGTGGTGCTGCCGGCGCTGACGCTGCTGTTGATCGTGTCGATCGTC
GCGTCGGCCGCGTTCGGCCC

Product: ABC Fe3+ siderophore transporter, periplasmic ligand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTAMPFPLLSSALSSALLPVSRRLLAAAVLGCAAAQAAAYPVTVRSCDRDVTFERAPTRAVSNDVNLTEMMLVLGLKDRL
VGYTGIGGWKTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGWNYGMHVGGAVTPATLAPFGIRTYELTESCSHV
MKQSAASFDDVFRDLNNLGRIFGVDARAAQVVGAMRARLAAVSRAIGHPAPLRVFVYDSGTDKPMTAGGLAMPTALLTAA
GARNVMADLPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLLSQPSLARVAAIRDRRFIVIPYDAATPGPENVAA
VETLARALYPAAFAGPAR

Sequences:

>Translated_338_residues
MTAMPFPLLSSALSSALLPVSRRLLAAAVLGCAAAQAAAYPVTVRSCDRDVTFERAPTRAVSNDVNLTEMMLVLGLKDRL
VGYTGIGGWKTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGWNYGMHVGGAVTPATLAPFGIRTYELTESCSHV
MKQSAASFDDVFRDLNNLGRIFGVDARAAQVVGAMRARLAAVSRAIGHPAPLRVFVYDSGTDKPMTAGGLAMPTALLTAA
GARNVMADLPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLLSQPSLARVAAIRDRRFIVIPYDAATPGPENVAA
VETLARALYPAAFAGPAR
>Mature_337_residues
TAMPFPLLSSALSSALLPVSRRLLAAAVLGCAAAQAAAYPVTVRSCDRDVTFERAPTRAVSNDVNLTEMMLVLGLKDRLV
GYTGIGGWKTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGWNYGMHVGGAVTPATLAPFGIRTYELTESCSHVM
KQSAASFDDVFRDLNNLGRIFGVDARAAQVVGAMRARLAAVSRAIGHPAPLRVFVYDSGTDKPMTAGGLAMPTALLTAAG
ARNVMADLPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLLSQPSLARVAAIRDRRFIVIPYDAATPGPENVAAV
ETLARALYPAAFAGPAR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35850; Mature: 35718

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMPFPLLSSALSSALLPVSRRLLAAAVLGCAAAQAAAYPVTVRSCDRDVTFERAPTRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHH
VSNDVNLTEMMLVLGLKDRLVGYTGIGGWKTGTARVRDALRGVPELASQYPSLEVLAAAR
HCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEHHHHC
ADFYLAGWNYGMHVGGAVTPATLAPFGIRTYELTESCSHVMKQSAASFDDVFRDLNNLGR
CCEEEECCCCCEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFGVDARAAQVVGAMRARLAAVSRAIGHPAPLRVFVYDSGTDKPMTAGGLAMPTALLTAA
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
GARNVMADLPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLLSQPSLARVAAIRD
CHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHCC
RRFIVIPYDAATPGPENVAAVETLARALYPAAFAGPAR
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAMPFPLLSSALSSALLPVSRRLLAAAVLGCAAAQAAAYPVTVRSCDRDVTFERAPTRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHH
VSNDVNLTEMMLVLGLKDRLVGYTGIGGWKTGTARVRDALRGVPELASQYPSLEVLAAAR
HCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEHHHHC
ADFYLAGWNYGMHVGGAVTPATLAPFGIRTYELTESCSHVMKQSAASFDDVFRDLNNLGR
CCEEEECCCCCEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFGVDARAAQVVGAMRARLAAVSRAIGHPAPLRVFVYDSGTDKPMTAGGLAMPTALLTAA
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
GARNVMADLPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLLSQPSLARVAAIRD
CHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHCC
RRFIVIPYDAATPGPENVAAVETLARALYPAAFAGPAR
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]