Click here to switch to the map view.

The map label for this gene is yhbY [C]

Identifier: 78065908

GI number: 78065908

Start: 1396006

End: 1396533

Strand: Reverse

Name: yhbY [C]

Synonym: Bcep18194_A4437

Alternate gene names: 78065908

Gene position: 1396533-1396006 (Counterclockwise)

Preceding gene: 161702962

Following gene: 78065899

Centisome position: 37.8

GC content: 68.56

Gene sequence:

>528_bases
ATGCCCGCCCTTTCGCTTTCTCCCGCCGAGCGCTCCGCGCTGCGCTCCCAGGCCCATGCGCTCAAGCCCGTCGTGCTGAT
CGGCGCCGAAGGGCTGACCGACGCCGTGCTGAAGGAAATCAAGGTGCACCTCGACGCGCACCAGTTGATCAAGATCCGCG
TGTTCGGCGACGAGCGCGACGAGCGCATCGCGATCTACGACGAGATCTGCGATCGCCTGAGCGCGGCGCCGATCCAGCAC
ATCGGCAAGCTGCTGGTGATCTGGAAACCCGAAGCCGCCGTGGCGGCCCCGGCCCGCGGCCGTCGTGCCGGCACCGTGCC
GAGCGCGGCCGAAGCCATCGACGACAAGAAAGGCCGTGCACCGCGCACCGTCAAGGTCGTCAAGGTGTCGCCGAACGCGA
GCCCGGTGCGCCGCCCGAAGCCGACGAAGGTCGTCGTGCGCGGCAACGAGCGCGTGACGGCAGGCGGTAACGTGAAGCGC
GCCAAGAAGCGCCAGGCCAGCACGAAGCGTCCGTTCCAGGACAAGTAA

Upstream 100 bases:

>100_bases
CCAAGCCGCGATTTTACGTGGTTTCGGCGCACGGCTGACGCGGTAACTTCCCGCGATCGCTATTCGGTCAGCGCGCCCTT
ATTTAGATTTCGACATTTCC

Downstream 100 bases:

>100_bases
GCATCGAGGCGGTACGGCTGCGCCGTGCCGCCGCCCTGCCCGCAGGCCCGGCATCGGCCGGGCCTGCGCGGCATTTGCGT
CAGGCGTCGCGCGCCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERDERIAIYDEICDRLSAAPIQH
IGKLLVIWKPEAAVAAPARGRRAGTVPSAAEAIDDKKGRAPRTVKVVKVSPNASPVRRPKPTKVVVRGNERVTAGGNVKR
AKKRQASTKRPFQDK

Sequences:

>Translated_175_residues
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERDERIAIYDEICDRLSAAPIQH
IGKLLVIWKPEAAVAAPARGRRAGTVPSAAEAIDDKKGRAPRTVKVVKVSPNASPVRRPKPTKVVVRGNERVTAGGNVKR
AKKRQASTKRPFQDK
>Mature_174_residues
PALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERDERIAIYDEICDRLSAAPIQHI
GKLLVIWKPEAAVAAPARGRRAGTVPSAAEAIDDKKGRAPRTVKVVKVSPNASPVRRPKPTKVVVRGNERVTAGGNVKRA
KKRQASTKRPFQDK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=87, Percent_Identity=40.2298850574713, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 19003; Mature: 18872

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERD
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCC
ERIAIYDEICDRLSAAPIQHIGKLLVIWKPEAAVAAPARGRRAGTVPSAAEAIDDKKGRA
CEEEHHHHHHHHHCCCCHHHCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCCC
PRTVKVVKVSPNASPVRRPKPTKVVVRGNERVTAGGNVKRAKKRQASTKRPFQDK
CCEEEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERD
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCC
ERIAIYDEICDRLSAAPIQHIGKLLVIWKPEAAVAAPARGRRAGTVPSAAEAIDDKKGRA
CEEEHHHHHHHHHCCCCHHHCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCCC
PRTVKVVKVSPNASPVRRPKPTKVVVRGNERVTAGGNVKRAKKRQASTKRPFQDK
CCEEEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]