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The map label for this gene is yafS [H]

Identifier: 78065899

GI number: 78065899

Start: 1384608

End: 1385420

Strand: Reverse

Name: yafS [H]

Synonym: Bcep18194_A4428

Alternate gene names: 78065899

Gene position: 1385420-1384608 (Counterclockwise)

Preceding gene: 78065908

Following gene: 78065898

Centisome position: 37.5

GC content: 68.27

Gene sequence:

>813_bases
ATGTCTGACCGTCAAATTATAGACTGGCCCGCCTGGACCGACTCACCGCCCGGCCGCTACGTGCTCGGCTGGGAGCAGGC
GCAGCTCGACCGGATCGTGTCCGACGTCTTCGGCTTCCACGCACTGCAGCTCGGCCTGCCGCAGCTCGACGCGCTGCGCG
AGAACCGCATGCCGTATCGCGGCCTCGTGCTCGATCCGGCGAGCGGCGCGAGCGCGCCGTACCAGTATCCGTGGGCGCGC
GAAGCGCACGCACCCGAGCACGCGCCCGACGGCCGCAGCACGACCTGGTGCGACCTGCTCGACCTGCCGTTCGAGTCGCA
GAGCGTCGACCTGATCGTGATGCCGCACACGCTCGAATTCACGTCCGACCCGCACCGGCTGCTGCGCGAGGCCGAGCGCG
TGCTGATGCCGGAAGGCCAGCTCGTGATCACCGGCTTCAATTCGCTCAGCCTGTGGGGCATGCGGCAATCGTTCGGGCGC
ATGGCGAACCGTCCGTTCGTGCCGGCCACGCGCGACCAGATCGCGTTCATCCGGCTCAAGGACTGGATCAAGCTGCTCGG
CTTCGATCTCGAACGCGGCCGCTTCGGCTGCTACCGGCCACCGCTCGTCACCGACAAGTGGCTGGCCCGCTACGGCTTCA
TGGAAGCCGCCGGCGACCGCTGGTGGCCGATCTTCGGCGCCGTCTACATGGTGACGGCCGTCAAGCGCGTGCGCGGCATG
CGCCTCGTCGGCCAGATCAAGATGAAGAAGCCCGTGCTCGCACCGGGCCTGACGCCGGCGGCCTCCCCGACCACCCATCA
AGAACATTCATGA

Upstream 100 bases:

>100_bases
CGATCGCATCGCGGCCGTCCGAGACGAGCCAGATATAGTTGTCATCGAATGCCGGAACCGGCACGTATTCCAGCTCGTTC
ATGGGCGCGCAATCATCGTT

Downstream 100 bases:

>100_bases
CTACCGATACCATCGACATCTATACCGACGGCGCCTGCAAGGGCAACCCCGGCCCCGGCGGCTGGGGCGCACTGATGCGC
TACGGCGACAAAGAGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYRGLVLDPASGASAPYQYPWAR
EAHAPEHAPDGRSTTWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGR
MANRPFVPATRDQIAFIRLKDWIKLLGFDLERGRFGCYRPPLVTDKWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
RLVGQIKMKKPVLAPGLTPAASPTTHQEHS

Sequences:

>Translated_270_residues
MSDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYRGLVLDPASGASAPYQYPWAR
EAHAPEHAPDGRSTTWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGR
MANRPFVPATRDQIAFIRLKDWIKLLGFDLERGRFGCYRPPLVTDKWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
RLVGQIKMKKPVLAPGLTPAASPTTHQEHS
>Mature_269_residues
SDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYRGLVLDPASGASAPYQYPWARE
AHAPEHAPDGRSTTWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGRM
ANRPFVPATRDQIAFIRLKDWIKLLGFDLERGRFGCYRPPLVTDKWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGMR
LVGQIKMKKPVLAPGLTPAASPTTHQEHS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=187, Percent_Identity=31.5508021390374, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 30740; Mature: 30609

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYR
CCCCEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GLVLDPASGASAPYQYPWAREAHAPEHAPDGRSTTWCDLLDLPFESQSVDLIVMPHTLEF
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHEECCCCCCCCEEEEEECCEECC
TSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGRMANRPFVPATRDQIAFIRLK
CCCHHHHHHHHHHHCCCCCCEEEEECCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
DWIKLLGFDLERGRFGCYRPPLVTDKWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RLVGQIKMKKPVLAPGLTPAASPTTHQEHS
HHHHHHECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYR
CCCEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GLVLDPASGASAPYQYPWAREAHAPEHAPDGRSTTWCDLLDLPFESQSVDLIVMPHTLEF
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHEECCCCCCCCEEEEEECCEECC
TSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGRMANRPFVPATRDQIAFIRLK
CCCHHHHHHHHHHHCCCCCCEEEEECCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
DWIKLLGFDLERGRFGCYRPPLVTDKWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RLVGQIKMKKPVLAPGLTPAASPTTHQEHS
HHHHHHECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]