| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065883
Identifier: 78065883
GI number: 78065883
Start: 1370873
End: 1372519
Strand: Direct
Name: 78065883
Synonym: Bcep18194_A4412
Alternate gene names: NA
Gene position: 1370873-1372519 (Clockwise)
Preceding gene: 78065882
Following gene: 78065884
Centisome position: 37.11
GC content: 68.25
Gene sequence:
>1647_bases ATGACGGGATGGAATCACGCGCGGCAGGCGCGCGATGCACGGCTCGCGGCCGGCGCGGTGTACGCGCAGGGCAAGCGGGT CGATGCGCGCGACACCGTGGCGTTGCTCGAAGCGGTGCTGCGGCCCGGCGACCGCGTCTGCCTCGAAGGCGACAACCAGA AGCAGGCCGACCTGCTCGCGACGGCGCTCGCCGACGTCGACAGCGCGAAGATCCACGACCTGCACATGGTGCAGTCGGGC GTCGTGCTGCCCGAGCATCTCGACGTGTTCGAGCGCGGCATCGCGAAGCGTCTCGACTTCGCGTATTCGGGCCCGCAGTC GCAGCGGATCGCGAAACTGCTGTTCGGCGGCAAGATCGCGCTCGGCGCGGTGCACACCTATCTCGAACTGTTCGCACGCT ACTTCATCGACCTCACGCCGCAGGTCGCGCTGATCGCTGCGGTCAGCGCCGATCGCGACGGCAACCTGTACACCGGCCCG AACACCGAAGATACGCCCACCGTCGTCGAGGCCACCGCGTTCAAGGACGGCGTCGTGATCGCGCAGGTCGACCGTATCGT CGACAAGGTGCCGCGCGTCGACATCCCGGGCGACCGCGTGCATTTCGTCGTCGAGGCCGGCCGGCCGTTCTACGTCGAGC CGCTGTTCACGCGCGATCCGGCCGCGATCACCGAAACGCAGATCCTCACCGCGATGCTCGCGATCAAGGGCATCTACGAG CCGTACGGCATCAAGCGCCTGAACCACGGGATCGGCTTCAACACGGCCGCGATCGAGCTGCTGCTGCCGACCTACGGCGA GAAGCTCGGGCTGAAAGGCAAGGTCTGCTCGCACTGGGCGCTCAATCCGCACCCGACGCTGATTCCCGCGATCGAGTCGG GCTGGGTCGAGCAGATCCATTGCTTCGGCTCGGAAGTCGGGATGGACGACTACATCCGCGCGCGTTCCGACATCTGGTTC ACCGGCCCCGACGGGTCGCTGCGCTCGAACCGTGCGTTCTGCCAGACGGCCGGCCTCTATGCGTGCGACATGTTCATCGG CTCGACGCTGCAGATCGACCTGTCCGGCCATTCGTCGACGGTCACGGCCGAGCGCATTGCCGGTTTCGGCGGCGCGCCGA ACATGGGCAGCGACGCGCGCGGCCGGCGCCATCCGAGCGAGCCGTGGCTGAAGGCCGGCGCGGAAGCCGACCCCGACACG CCGGCGGCGCTCAGGCGCGGCCGCAAGCTCGTCGTGCAGATCGGCGAGACGTTCGGCGACAAGAACGTGCCGATGTTCGT CGAGAAGCTCGACGCGCTGAAGCTCGCCGACAAGCTGCAGCTCGACCTCGCGCCGATCATGGTCTACGGCGACGACGTCA CGCACATCGTCACCGAGGAAGGGATCGCGAACCTGCTGATGTGCCGCGACAAGGACGAACGCGAGCACGCGATCCGCGGC GTCGCCGGCTATACCGAGATCGGCCGCGGCCGCGACCGGAAAATGGTCGAGCGGCTGCGCGAGCGCGGCGTGATCCGCCG CCCGGAGGATCTCGGCATCGATCCGCTCGACGCCGATCGCCGCTGGCTCGCCGCGCGTTCGATCAAGGATCTCGTGCACT GGTCGGGCGGGCTCTATGCGCCGCCGGCCCGGTTCCGCAACTGGTAA
Upstream 100 bases:
>100_bases TCCATCGCCGCGTCCTCTGAGTCGCATTCGTCAACATCATCAATCGGCGGCGGCGCCAGGCTTAGAATGCCGCTGAACCA TCGAAGCGGGAGAACTGTTC
Downstream 100 bases:
>100_bases GGACAAGGGCATGGAACAGTTGAACTATCGCTTCACCGCGCGCGAACGCGCGAAGGGCGAGCAGGCCGCGGCGCTCGTCG GCGTGGTGGCATCCGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MTGWNHARQARDARLAAGAVYAQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLATALADVDSAKIHDLHMVQSG VVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIALGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGP NTEDTPTVVEATAFKDGVVIAQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE PYGIKRLNHGIGFNTAAIELLLPTYGEKLGLKGKVCSHWALNPHPTLIPAIESGWVEQIHCFGSEVGMDDYIRARSDIWF TGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLSGHSSTVTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAEADPDT PAALRRGRKLVVQIGETFGDKNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG VAGYTEIGRGRDRKMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYAPPARFRNW
Sequences:
>Translated_548_residues MTGWNHARQARDARLAAGAVYAQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLATALADVDSAKIHDLHMVQSG VVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIALGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGP NTEDTPTVVEATAFKDGVVIAQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE PYGIKRLNHGIGFNTAAIELLLPTYGEKLGLKGKVCSHWALNPHPTLIPAIESGWVEQIHCFGSEVGMDDYIRARSDIWF TGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLSGHSSTVTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAEADPDT PAALRRGRKLVVQIGETFGDKNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG VAGYTEIGRGRDRKMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYAPPARFRNW >Mature_547_residues TGWNHARQARDARLAAGAVYAQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLATALADVDSAKIHDLHMVQSGV VLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIALGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGPN TEDTPTVVEATAFKDGVVIAQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYEP YGIKRLNHGIGFNTAAIELLLPTYGEKLGLKGKVCSHWALNPHPTLIPAIESGWVEQIHCFGSEVGMDDYIRARSDIWFT GPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLSGHSSTVTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAEADPDTP AALRRGRKLVVQIGETFGDKNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRGV AGYTEIGRGRDRKMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYAPPARFRNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60254; Mature: 60122
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWNHARQARDARLAAGAVYAQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLA CCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH TALADVDSAKIHDLHMVQSGVVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIA HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH LGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGPNTEDTPTVVEATAFKDGVVI HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCEEE AQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECEECCCCCCHHHHHHHHHHHHHHHHCCC PYGIKRLNHGIGFNTAAIELLLPTYGEKLGLKGKVCSHWALNPHPTLIPAIESGWVEQIH CCCHHHHHCCCCCCHHHEEEEECCCCHHCCCCCCHHCCCCCCCCCCEEECHHCCHHHHHH CFGSEVGMDDYIRARSDIWFTGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLSGHSST HHCCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHCCCCEEHHHHCCEEEEEECCCCCC VTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAEADPDTPAALRRGRKLVVQIGETFGD EEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCC KNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG CCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH VAGYTEIGRGRDRKMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYA HHCHHHHCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC PPARFRNW CCHHHCCC >Mature Secondary Structure TGWNHARQARDARLAAGAVYAQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLA CCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH TALADVDSAKIHDLHMVQSGVVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIA HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH LGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGPNTEDTPTVVEATAFKDGVVI HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCEEE AQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECEECCCCCCHHHHHHHHHHHHHHHHCCC PYGIKRLNHGIGFNTAAIELLLPTYGEKLGLKGKVCSHWALNPHPTLIPAIESGWVEQIH CCCHHHHHCCCCCCHHHEEEEECCCCHHCCCCCCHHCCCCCCCCCCEEECHHCCHHHHHH CFGSEVGMDDYIRARSDIWFTGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLSGHSST HHCCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHCCCCEEHHHHCCEEEEEECCCCCC VTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAEADPDTPAALRRGRKLVVQIGETFGD EEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCC KNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG CCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH VAGYTEIGRGRDRKMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYA HHCHHHHCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC PPARFRNW CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA